RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH11X-208	ENST00000504220	ENPP1	P22413	925 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ZBED6	P86452	979 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SKIDA1	Q1XH10	827 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	WAPL	Q7Z5K2	1190 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PHC3	Q8NDX5	983 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	FEZ1	Q99689	392 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	DUSP9	Q99956	384 aa	Known RBP	4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MAPK8IP1	Q9UQF2	711 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TRPM3	Q9HCF6	1732 aa	Predicted RBP	4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220		H7C1W4	665 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MYO1C	O00159	1063 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ST18	O60284	1047 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CP	P00450	1065 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	INHBC	P55103	352 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ADCY2	Q08462	1091 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NEXN	Q0ZGT2	675 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CCDC26	Q8TAB7	109 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	LZTS2	Q9BRK4	669 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	STK31	Q9BXU1	1019 aa		4.37	□□□□□ -1.71
PCDH11X-208	ENST00000504220	USP54	Q70EL1	1684 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	FAM200B	P0CF97	657 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TRPC1	P48995	793 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	EIF5	P55010	431 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NOLC1	Q14978	699 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NAIF1	Q69YI7	327 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ZNF280D	Q6N043	979 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SYT10	Q6XYQ8	523 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ADGRF5	Q8IZF2	1346 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	RASSF8	Q8NHQ8	419 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	JRKL	Q9Y4A0	524 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ADGRL3	Q9HAR2	1447 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	BECN2	A8MW95	431 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CASQ1	P31415	396 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NAA30	Q147X3	362 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TRERF1	Q96PN7	1200 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SRRT	Q9BXP5	876 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	INCENP	Q9NQS7	918 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ETAA1	Q9NY74	926 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	RBM47	A0AV96	593 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	VPS37C	A5D8V6	355 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	DDX11L8	A8MPP1	907 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	KIN	O60870	393 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CSB-PGBD3	P0DP91	1061 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	EIF2S2	P20042	333 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ABCD1	P33897	745 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CCNH	P51946	323 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SLC7A5	Q01650	507 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PUS10	Q3MIT2	529 aa	Known RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	KAT2B	Q92831	832 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MIEF2	Q96C03	454 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SYNPO2	Q9UMS6	1093 aa		4.36	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TRAK2	O60296	914 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	REC8	O95072	547 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PDE3B	Q13370	1112 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	FKBP5	Q13451	457 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NGDN	Q8NEJ9	315 aa	Known RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ANO2	Q9NQ90	1003 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CWC25	Q9NXE8	425 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	RGPD8	O14715	1765 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PTPRC	P08575	1304 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SOS1	Q07889	1333 aa	Predicted RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CCDC173	Q0VFZ6	552 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	LRRC31	Q6UY01	552 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PRAM1	Q96QH2	718 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CABP2	Q9NPB3	220 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CHMP5	Q9NZZ3	219 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MST1R	Q04912	1400 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ALS2	Q96Q42	1657 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	GOLGA6L19	H0YKK7	550 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	BBOX1	O75936	387 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	RBM25	P49756	843 aa	Known RBP	4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PPP4C	P60510	307 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	ZKSCAN2	Q63HK3	967 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TBC1D7	Q9P0N9	293 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	EXOC6B	Q9Y2D4	811 aa		4.35	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MET	P08581	1390 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MYBBP1A	Q9BQG0	1328 aa	Known RBP	4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220		H3BQV1	296 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PYGL	P06737	847 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TRDN	Q13061	729 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	HDAC1	Q13547	482 aa	Predicted RBP	4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	IFFO2	Q5TF58	517 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	CAVIN1	Q6NZI2	390 aa	Known RBP	4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SRL	Q86TD4	932 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PLEKHG4B	Q96PX9	1271 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	FMNL2	Q96PY5	1086 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	C22orf23	Q9BZE7	217 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TSPYL1	Q9H0U9	437 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	RETREG1	Q9H6L5	497 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	NRBP1	Q9UHY1	535 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	MRVI1	Q9Y6F6	885 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	TMEM94	Q12767	1356 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	HMMR	O75330	724 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PPFIA2	O75334	1257 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	HOXD10	P28358	340 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	SNX1	Q13596	522 aa		4.34	□□□□□ -1.71
PCDH11X-208	ENST00000504220	PPP2R5A	Q15172	486 aa		4.34	□□□□□ -1.71

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