RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 SNUPNO95149 360 aaKnown RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 KRT10P13645 584 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 MAP9Q49MG5 647 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 CUX2O14529 1486 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 E2F6O75461 281 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 HDGFP51858 240 aaKnown RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 CAVIN1Q6NZI2 390 aaKnown RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 SDR16C5Q8N3Y7 309 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 TAF4BQ92750 862 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 RPS6KC1Q96S38 1066 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 PANK2Q9BZ23 570 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 IVNS1ABPQ9Y6Y0 642 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 TPD52L1Q16890 204 aaPredicted RBP7.18□□□□□ -1.26
CLCN3-204ENST00000504131 SLC39A3Q9BRY0 314 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
CLCN3-204ENST00000504131 NAT2P11245 290 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 CAPN2P17655 700 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 EPS15P42566 896 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 RAD51AP2Q09MP3 1159 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 ATP6V0A1Q93050 837 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TSPY26PQ9H489 355 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 MRC2Q9UBG0 1479 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 POU5F1Q01860 360 aaKnown RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 SF3B3Q15393 1217 aaKnown RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 ATP11CQ8NB49 1132 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 SYNPO2Q9UMS6 1093 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 STMND1H3BQB6 276 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 ERLIN2O94905 339 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TRIM68Q6AZZ1 485 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 HELBQ8NG08 1087 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 GFM2Q969S9 779 aaKnown RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TSG101Q99816 390 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TACO1Q9BSH4 297 aaKnown RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TANGO6Q9C0B7 1094 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 MTUS2Q5JR59 1369 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 LINC00854A0A1B0GVQ3 168 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 CBFA2T2O43439 604 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 RHOXF2BP0C7M4 288 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TMOD1P28289 359 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 KIF5BP33176 963 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 TPD52P55327 224 aaPredicted RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC63Q8NA47 563 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 CDK5RAP3Q96JB5 506 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 SIN3AQ96ST3 1273 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 RHOXF2Q9BQY4 288 aa7.17□□□□□ -1.26
CLCN3-204ENST00000504131 SRRTQ9BXP5 876 aaKnown RBP7.17□□□□□ -1.26
CLCN3-204ENST00000504131 RNF187Q5TA31 235 aaPredicted RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 SELENOSQ9BQE4 189 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 DRC3Q9H069 523 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 TNMDQ9H2S6 317 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MTUS1Q9ULD2 1270 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MACROD2A1Z1Q3 448 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 LSM1O15116 133 aaKnown RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 IFFO2Q5TF58 517 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC174Q6PII3 467 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MMS22LQ6ZRQ5 1243 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MYO1HQ8N1T3 1032 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 GNL3LQ9NVN8 582 aaKnown RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 ARPC4-TTLL3A0A0A6YYG9 625 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 PLEKHG3A1L390 1219 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 B3GALNT1O75752 331 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 SERPINC1P01008 464 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 PRKG1Q13976 671 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 UVSSAQ2YD98 709 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 ZNF365Q70YC5 407 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 ITPRIPQ8IWB1 547 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 TEX11Q8IYF3 940 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MSANTD4Q8NCY6 345 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 THOC1Q96FV9 657 aaKnown RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 RRP15Q9Y3B9 282 aaKnown RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 ZNF711Q9Y462 761 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 MAPK8IP3Q9UPT6 1336 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 TRIM64CA6NLI5 447 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 SFSWAPQ12872 951 aaKnown RBP7.16□□□□□ -1.26
CLCN3-204ENST00000504131 LAMB3Q13751 1172 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 KBTBD12Q3ZCT8 623 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 LUZP1Q86V48 1076 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 CCDC144CPQ8IYA2 1237 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 PFDN4Q9NQP4 134 aa7.16□□□□□ -1.26
CLCN3-204ENST00000504131 CARNS1A5YM72 827 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 FCHSD2O94868 740 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 MAF1Q9H063 256 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 DHX36Q9H2U1 1008 aaKnown RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 DNAJC5BQ9UF47 199 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 PPP1R9AQ9ULJ8 1098 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 UBE4AQ14139 1066 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 EXOC6Q8TAG9 804 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 JDP2Q8WYK2 163 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 ATP6V0A2Q9Y487 856 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 CARMIL1Q5VZK9 1371 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 PPP1R12BO60237 982 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 NEK2P51955 445 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 TTLL12Q14166 644 aaPredicted RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 NOLC1Q14978 699 aaKnown RBP eCLIP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 ZCCHC8Q6NZY4 707 aaKnown RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 SPATS2Q86XZ4 545 aaKnown RBP7.15□□□□□ -1.26
CLCN3-204ENST00000504131 TRIM7Q9C029 511 aa7.15□□□□□ -1.26
CLCN3-204ENST00000504131 LUC7LQ9NQ29 371 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms