RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
PROM1-204ENST00000503884 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
PROM1-204ENST00000503884 HOXA10P31260 410 aaPredicted RBP11.91□□□□□ -0.5
PROM1-204ENST00000503884 LDHDQ86WU2 507 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 ZNF34Q8IZ26 560 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 PSMD1Q99460 953 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
PROM1-204ENST00000503884 NYXQ9GZU5 481 aa11.91□□□□□ -0.5
PROM1-204ENST00000503884 ANKRD36CQ5JPF3 1778 aa11.9□□□□□ -0.5
PROM1-204ENST00000503884 IARSP41252 1262 aaKnown RBP11.9□□□□□ -0.5
PROM1-204ENST00000503884 LTBP1Q14766 1721 aa11.9□□□□□ -0.5
PROM1-204ENST00000503884 NUTM1Q86Y26 1132 aa11.9□□□□□ -0.5
PROM1-204ENST00000503884 SYNE4Q8N205 404 aa11.9□□□□□ -0.5
PROM1-204ENST00000503884 NTSR2O95665 410 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 PDIA6Q15084 440 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 SUSD4Q5VX71 490 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 GIGYF2Q6Y7W6 1299 aaKnown RBP11.89□□□□□ -0.51
PROM1-204ENST00000503884 NGEFQ8N5V2 710 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 RRP7AQ9Y3A4 280 aaKnown RBP11.89□□□□□ -0.51
PROM1-204ENST00000503884 LAMB2P55268 1798 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 CNTNAP1P78357 1384 aa11.89□□□□□ -0.51
PROM1-204ENST00000503884 NEFMP07197 916 aa11.88□□□□□ -0.51
PROM1-204ENST00000503884 MYL6BP14649 208 aa11.88□□□□□ -0.51
PROM1-204ENST00000503884 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
PROM1-204ENST00000503884 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
PROM1-204ENST00000503884 HACL1Q9UJ83 578 aa11.88□□□□□ -0.51
PROM1-204ENST00000503884 GPTP24298 496 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
PROM1-204ENST00000503884 C3orf67Q6ZVT6 689 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 SLC51AQ86UW1 340 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 GPC2Q8N158 579 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 CRAMP1Q96RY5 1269 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 PNNQ9H307 717 aaKnown RBP11.87□□□□□ -0.51
PROM1-204ENST00000503884 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 BABAM1Q9NWV8 329 aa11.87□□□□□ -0.51
PROM1-204ENST00000503884 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
PROM1-204ENST00000503884 RNF123Q5XPI4 1314 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 EPHX2P34913 555 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 GRIPAP1Q4V328 841 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 TNS4Q8IZW8 715 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 MAPK8IP3Q9UPT6 1336 aa11.86□□□□□ -0.51
PROM1-204ENST00000503884 PROSER3Q2NL68 480 aa11.85□□□□□ -0.51
PROM1-204ENST00000503884 PARP10Q53GL7 1025 aa11.85□□□□□ -0.51
PROM1-204ENST00000503884 PNMA8AQ86V59 439 aaPredicted RBP11.85□□□□□ -0.51
PROM1-204ENST00000503884 RBM17Q96I25 401 aaKnown RBP11.85□□□□□ -0.51
PROM1-204ENST00000503884 TSPYL4Q9UJ04 414 aa11.85□□□□□ -0.51
PROM1-204ENST00000503884 TRPM7Q96QT4 1865 aa11.85□□□□□ -0.51
PROM1-204ENST00000503884 ZNF316A6NFI3 1004 aaPredicted RBP11.84□□□□□ -0.51
PROM1-204ENST00000503884 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
PROM1-204ENST00000503884 RIPK4P57078 832 aa11.84□□□□□ -0.51
PROM1-204ENST00000503884 PPP1R42Q7Z4L9 355 aa11.84□□□□□ -0.51
PROM1-204ENST00000503884 JDP2Q8WYK2 163 aa11.84□□□□□ -0.51
PROM1-204ENST00000503884 RPGRQ92834 1020 aaKnown RBP11.84□□□□□ -0.51
PROM1-204ENST00000503884 TAF1P21675 1872 aa11.84□□□□□ -0.51
PROM1-204ENST00000503884 THSD7BQ9C0I4 1608 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 RASSF10A6NK89 507 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 PPEF1O14829 653 aaPredicted RBP11.83□□□□□ -0.52
PROM1-204ENST00000503884 TMPOP42166 694 aaKnown RBP11.83□□□□□ -0.52
PROM1-204ENST00000503884 VEGFBP49765 207 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 SCNN1DP51172 638 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 RALBP1Q15311 655 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 EAPPQ56P03 285 aaPredicted RBP11.83□□□□□ -0.52
PROM1-204ENST00000503884 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 RTFDC1Q9BY42 306 aaPredicted RBP11.83□□□□□ -0.52
PROM1-204ENST00000503884 VPS33BQ9H267 617 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 LRRC37AA6NMS7 1700 aa11.83□□□□□ -0.52
PROM1-204ENST00000503884 DDX60Q8IY21 1712 aaKnown RBP11.83□□□□□ -0.52
PROM1-204ENST00000503884 CHL1O00533 1208 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 FOXN1O15353 648 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 ANXA1P04083 346 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 EIF6P56537 245 aaKnown RBP11.82□□□□□ -0.52
PROM1-204ENST00000503884 DDX10Q13206 875 aaKnown RBP11.82□□□□□ -0.52
PROM1-204ENST00000503884 MAP1SQ66K74 1059 aaPredicted RBP11.82□□□□□ -0.52
PROM1-204ENST00000503884 NLRP3Q96P20 1036 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 UTP14AQ9BVJ6 771 aaKnown RBP11.82□□□□□ -0.52
PROM1-204ENST00000503884 ATP6V0A2Q9Y487 856 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 ABCC4O15439 1325 aa11.82□□□□□ -0.52
PROM1-204ENST00000503884 DUOX1Q9NRD9 1551 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 ATXN8OSP0DMR3 200 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 EIF2S2P20042 333 aaKnown RBP11.81□□□□□ -0.52
PROM1-204ENST00000503884 DSG3P32926 999 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 EPS15P42566 896 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 COPS6Q7L5N1 327 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 NLRP10Q86W26 655 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 LARGE2Q8N3Y3 721 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 WBP1LQ9NX94 342 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
PROM1-204ENST00000503884 LMOD3Q0VAK6 560 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 TCIRG1Q13488 830 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 XAGE3Q8WTP9 111 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 PRDM10Q9NQV6 1147 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 DDX21Q9NR30 783 aaKnown RBP eCLIP11.8□□□□□ -0.52
PROM1-204ENST00000503884 TRIM35Q9UPQ4 493 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 GJA3Q9Y6H8 435 aa11.8□□□□□ -0.52
PROM1-204ENST00000503884 PPIP5K2O43314 1243 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 ABCB7O75027 752 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 BBOX1O75936 387 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 AOC3Q16853 763 aa11.79□□□□□ -0.52
PROM1-204ENST00000503884 KRT24Q2M2I5 525 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms