RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 LAMB4A4D0S4 1761 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 NUP98P52948 1817 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 RIPK4P57078 832 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
SNCA-207ENST00000502987 RALBP1Q15311 655 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 NYXQ9GZU5 481 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 TSPYL4Q9UJ04 414 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 KDM3BQ7LBC6 1761 aa14.11□□□□□ -0.15
SNCA-207ENST00000502987 GPTP24298 496 aa14.1□□□□□ -0.15
SNCA-207ENST00000502987 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
SNCA-207ENST00000502987 CCDC93Q567U6 631 aa14.1□□□□□ -0.15
SNCA-207ENST00000502987 ZBTB3Q9H5J0 574 aa14.1□□□□□ -0.15
SNCA-207ENST00000502987 ARFGEF2Q9Y6D5 1785 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 ERVV-1B6SEH8 477 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 RGL2O15211 777 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 EIF2S2P20042 333 aaKnown RBP14.09□□□□□ -0.15
SNCA-207ENST00000502987 NEUROD2Q15784 382 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 IFFO2Q5TF58 517 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 TTLL7Q6ZT98 887 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 LTBP3Q9NS15 1303 aa14.09□□□□□ -0.15
SNCA-207ENST00000502987 DDNO94850 711 aaPredicted RBP14.08□□□□□ -0.16
SNCA-207ENST00000502987 NUTM1Q86Y26 1132 aa14.08□□□□□ -0.16
SNCA-207ENST00000502987 RPGRQ92834 1020 aaKnown RBP14.08□□□□□ -0.16
SNCA-207ENST00000502987 KLRG1Q96E93 195 aa14.08□□□□□ -0.16
SNCA-207ENST00000502987 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
SNCA-207ENST00000502987 OLFM4Q6UX06 510 aa14.07□□□□□ -0.16
SNCA-207ENST00000502987 CCDC146Q8IYE0 955 aa14.07□□□□□ -0.16
SNCA-207ENST00000502987 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
SNCA-207ENST00000502987 KLRG2A4D1S0 409 aaPredicted RBP14.06□□□□□ -0.16
SNCA-207ENST00000502987 POTECB2RU33 542 aa14.06□□□□□ -0.16
SNCA-207ENST00000502987 TMPOP42166 694 aaKnown RBP14.06□□□□□ -0.16
SNCA-207ENST00000502987 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNCA-207ENST00000502987 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
SNCA-207ENST00000502987 C7orf43Q8WVR3 580 aa14.06□□□□□ -0.16
SNCA-207ENST00000502987 NECTIN2Q92692 538 aa14.06□□□□□ -0.16
SNCA-207ENST00000502987 ZNF277Q9NRM2 450 aaPredicted RBP14.06□□□□□ -0.16
SNCA-207ENST00000502987 LAS1LQ9Y4W2 734 aaKnown RBP14.06□□□□□ -0.16
SNCA-207ENST00000502987 TCERG1O14776 1098 aaKnown RBP14.05□□□□□ -0.16
SNCA-207ENST00000502987 PPP1R42Q7Z4L9 355 aa14.05□□□□□ -0.16
SNCA-207ENST00000502987 SYNE4Q8N205 404 aa14.05□□□□□ -0.16
SNCA-207ENST00000502987 SUSD4Q5VX71 490 aa14.04□□□□□ -0.16
SNCA-207ENST00000502987 GIGYF2Q6Y7W6 1299 aaKnown RBP14.04□□□□□ -0.16
SNCA-207ENST00000502987 MYBBP1AQ9BQG0 1328 aaKnown RBP14.04□□□□□ -0.16
SNCA-207ENST00000502987 IQCA1LA6NCM1 817 aa14.03□□□□□ -0.16
SNCA-207ENST00000502987 ANXA1P04083 346 aa14.03□□□□□ -0.16
SNCA-207ENST00000502987 AIMP1Q12904 312 aaKnown RBP14.03□□□□□ -0.16
SNCA-207ENST00000502987 JDP2Q8WYK2 163 aa14.03□□□□□ -0.16
SNCA-207ENST00000502987 RBM17Q96I25 401 aaKnown RBP14.03□□□□□ -0.16
SNCA-207ENST00000502987 TMX4Q9H1E5 349 aaPredicted RBP14.03□□□□□ -0.16
SNCA-207ENST00000502987 ERBB4Q15303 1308 aa14.03□□□□□ -0.16
SNCA-207ENST00000502987 PCNTO95613 3336 aa14.02□□□□□ -0.16
SNCA-207ENST00000502987 ABCC12Q96J65 1359 aa14.02□□□□□ -0.17
SNCA-207ENST00000502987 UBN2Q6ZU65 1347 aa14.02□□□□□ -0.17
SNCA-207ENST00000502987 IARSP41252 1262 aaKnown RBP14.02□□□□□ -0.17
SNCA-207ENST00000502987 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.17
SNCA-207ENST00000502987 ZNF34Q8IZ26 560 aa14.02□□□□□ -0.17
SNCA-207ENST00000502987 NLRP3Q96P20 1036 aa14.02□□□□□ -0.17
SNCA-207ENST00000502987 BABAM1Q9NWV8 329 aa14.02□□□□□ -0.17
SNCA-207ENST00000502987 PARP10Q53GL7 1025 aa14.01□□□□□ -0.17
SNCA-207ENST00000502987 CC2D2BQ6DHV5 1058 aa14.01□□□□□ -0.17
SNCA-207ENST00000502987 RUNDC1Q96C34 613 aa14.01□□□□□ -0.17
SNCA-207ENST00000502987 UTP14AQ9BVJ6 771 aaKnown RBP14.01□□□□□ -0.17
SNCA-207ENST00000502987 SCN4AP35499 1836 aa14.01□□□□□ -0.17
SNCA-207ENST00000502987 POTEJP0CG39 1038 aa14□□□□□ -0.17
SNCA-207ENST00000502987 PROSER3Q2NL68 480 aa14□□□□□ -0.17
SNCA-207ENST00000502987 CRY2Q49AN0 593 aa14□□□□□ -0.17
SNCA-207ENST00000502987 COPS6Q7L5N1 327 aa14□□□□□ -0.17
SNCA-207ENST00000502987 JMYQ8N9B5 988 aa14□□□□□ -0.17
SNCA-207ENST00000502987 HACL1Q9UJ83 578 aa14□□□□□ -0.17
SNCA-207ENST00000502987 GJA3Q9Y6H8 435 aa14□□□□□ -0.17
SNCA-207ENST00000502987 ZNF541Q9H0D2 1346 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 PPEF1O14829 653 aaPredicted RBP13.99□□□□□ -0.17
SNCA-207ENST00000502987 NTSR2O95665 410 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 EIF6P56537 245 aaKnown RBP13.99□□□□□ -0.17
SNCA-207ENST00000502987 PDIA6Q15084 440 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 HSP90AB3PQ58FF7 597 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 LDHDQ86WU2 507 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 XAGE3Q8WTP9 111 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 CRAMP1Q96RY5 1269 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 TAF1DQ9H5J8 278 aaPredicted RBP13.99□□□□□ -0.17
SNCA-207ENST00000502987 ADAMTS8Q9UP79 889 aa13.99□□□□□ -0.17
SNCA-207ENST00000502987 IBTKQ9P2D0 1353 aaPredicted RBP13.98□□□□□ -0.17
SNCA-207ENST00000502987 HOXA10P31260 410 aaPredicted RBP13.98□□□□□ -0.17
SNCA-207ENST00000502987 GRIPAP1Q4V328 841 aa13.98□□□□□ -0.17
SNCA-207ENST00000502987 LARGE2Q8N3Y3 721 aa13.98□□□□□ -0.17
SNCA-207ENST00000502987 L3MBTL3Q96JM7 780 aaPredicted RBP13.98□□□□□ -0.17
SNCA-207ENST00000502987 PSMD1Q99460 953 aa13.98□□□□□ -0.17
SNCA-207ENST00000502987 RNF123Q5XPI4 1314 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 FZD9O00144 591 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 EPHX2P34913 555 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 KRT24Q2M2I5 525 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 ZNF428Q96B54 188 aa13.97□□□□□ -0.17
SNCA-207ENST00000502987 DDX21Q9NR30 783 aaKnown RBP eCLIP13.97□□□□□ -0.17
SNCA-207ENST00000502987 MKRN1Q9UHC7 482 aaKnown RBP13.97□□□□□ -0.17
SNCA-207ENST00000502987 TRMT112Q9UI30 125 aaKnown RBP13.97□□□□□ -0.17
SNCA-207ENST00000502987 CHL1O00533 1208 aa13.96□□□□□ -0.17
SNCA-207ENST00000502987 HCLS1P14317 486 aaPredicted RBP13.96□□□□□ -0.17
SNCA-207ENST00000502987 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 163 ms