RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 DLG5Q8TDM6 1919 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 ANXA1P04083 346 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 HTRA3P83110 453 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
COPB2-202ENST00000502734 PROSER3Q2NL68 480 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 CC2D2BQ6DHV5 1058 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 RBM17Q96I25 401 aaKnown RBP11.78□□□□□ -0.52
COPB2-202ENST00000502734 NLRP3Q96P20 1036 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 UTP14AQ9BVJ6 771 aaKnown RBP11.78□□□□□ -0.52
COPB2-202ENST00000502734 ZNF277Q9NRM2 450 aaPredicted RBP11.78□□□□□ -0.52
COPB2-202ENST00000502734 UBN2Q6ZU65 1347 aa11.78□□□□□ -0.52
COPB2-202ENST00000502734 NTSR2O95665 410 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 SLC10A5Q5PT55 438 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 XAGE3Q8WTP9 111 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 KLRG1Q96E93 195 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 CRAMP1Q96RY5 1269 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.53
COPB2-202ENST00000502734 BCORQ6W2J9 1755 aa11.77□□□□□ -0.53
COPB2-202ENST00000502734 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
COPB2-202ENST00000502734 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
COPB2-202ENST00000502734 PSMD1Q99460 953 aa11.76□□□□□ -0.53
COPB2-202ENST00000502734 IBTKQ9P2D0 1353 aaPredicted RBP11.76□□□□□ -0.53
COPB2-202ENST00000502734 CCDC88AQ3V6T2 1871 aa11.76□□□□□ -0.53
COPB2-202ENST00000502734 KDM3BQ7LBC6 1761 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 FER1L6Q2WGJ9 1857 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 IQCA1LA6NCM1 817 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 IARSP41252 1262 aaKnown RBP11.75□□□□□ -0.53
COPB2-202ENST00000502734 KRT24Q2M2I5 525 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 CHADLQ6NUI6 762 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 L3MBTL3Q96JM7 780 aaPredicted RBP11.75□□□□□ -0.53
COPB2-202ENST00000502734 TMX4Q9H1E5 349 aaPredicted RBP11.75□□□□□ -0.53
COPB2-202ENST00000502734 ABCC12Q96J65 1359 aa11.75□□□□□ -0.53
COPB2-202ENST00000502734 COL11A2P13942 1736 aaPredicted RBP11.74□□□□□ -0.53
COPB2-202ENST00000502734 FZD9O00144 591 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
COPB2-202ENST00000502734 HOXB7P09629 217 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 DSG3P32926 999 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 HDGFL1Q5TGJ6 251 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 ANKRD13DQ6ZTN6 518 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 NLRP10Q86W26 655 aa11.74□□□□□ -0.53
COPB2-202ENST00000502734 DBF4Q9UBU7 674 aaPredicted RBP11.74□□□□□ -0.53
COPB2-202ENST00000502734 APAF1O14727 1248 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
COPB2-202ENST00000502734 BBOX1O75936 387 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 DUSP27Q5VZP5 1158 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 JMYQ8N9B5 988 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 TAF1DQ9H5J8 278 aaPredicted RBP11.73□□□□□ -0.53
COPB2-202ENST00000502734 TNRC6CQ9HCJ0 1690 aaKnown RBP11.73□□□□□ -0.53
COPB2-202ENST00000502734 CHPF2Q9P2E5 772 aa11.73□□□□□ -0.53
COPB2-202ENST00000502734 TRMT112Q9UI30 125 aaKnown RBP11.73□□□□□ -0.53
COPB2-202ENST00000502734 NUP98P52948 1817 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 RIC1Q4ADV7 1423 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 ZNF541Q9H0D2 1346 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 POTEIP0CG38 1075 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 POTEJP0CG39 1038 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
COPB2-202ENST00000502734 EIF6P56537 245 aaKnown RBP11.72□□□□□ -0.53
COPB2-202ENST00000502734 CALD1Q05682 793 aaKnown RBP11.72□□□□□ -0.53
COPB2-202ENST00000502734 PLBD2Q8NHP8 589 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 MBIPQ9NS73 344 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 HYPKQ9NX55 129 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 HACL1Q9UJ83 578 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 ATP6V0A2Q9Y487 856 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 LAMB4A4D0S4 1761 aa11.72□□□□□ -0.53
COPB2-202ENST00000502734 SH3TC1Q8TE82 1336 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 DICER1Q9UPY3 1922 aaKnown RBP11.71□□□□□ -0.53
COPB2-202ENST00000502734 GNAI1P63096 354 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 SP8Q8IXZ3 490 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 GPC2Q8N158 579 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 VPS33BQ9H267 617 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 IFT57Q9NWB7 429 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 CLEC11AQ9Y240 323 aa11.71□□□□□ -0.53
COPB2-202ENST00000502734 WDR90Q96KV7 1748 aa11.71□□□□□ -0.54
COPB2-202ENST00000502734 EPHX2P34913 555 aa11.7□□□□□ -0.54
COPB2-202ENST00000502734 EAPPQ56P03 285 aaPredicted RBP11.7□□□□□ -0.54
COPB2-202ENST00000502734 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
COPB2-202ENST00000502734 PNMA8AQ86V59 439 aaPredicted RBP11.7□□□□□ -0.54
COPB2-202ENST00000502734 GJA3Q9Y6H8 435 aa11.7□□□□□ -0.54
COPB2-202ENST00000502734 ABCC4O15439 1325 aa11.69□□□□□ -0.54
COPB2-202ENST00000502734 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
COPB2-202ENST00000502734 TRIM28Q13263 835 aaKnown RBP11.69□□□□□ -0.54
COPB2-202ENST00000502734 SUPT20HQ8NEM7 779 aa11.69□□□□□ -0.54
COPB2-202ENST00000502734 ISCA1Q9BUE6 129 aa11.69□□□□□ -0.54
COPB2-202ENST00000502734 CHMP4AQ9BY43 222 aa11.69□□□□□ -0.54
COPB2-202ENST00000502734 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
COPB2-202ENST00000502734 PCNTO95613 3336 aa11.68□□□□□ -0.54
COPB2-202ENST00000502734 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
COPB2-202ENST00000502734 PPIP5K2O43314 1243 aa11.68□□□□□ -0.54
COPB2-202ENST00000502734 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
COPB2-202ENST00000502734 ZEB1P37275 1124 aaPredicted RBP11.68□□□□□ -0.54
COPB2-202ENST00000502734 GRAPQ13588 217 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms