RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 BICDL1Q6ZP65 573 aa7.75□□□□□ -1.17
FXN-205ENST00000498653 ZCRB1Q8TBF4 217 aaKnown RBP7.75□□□□□ -1.17
FXN-205ENST00000498653 GUCD1Q96NT3 240 aa7.75□□□□□ -1.17
FXN-205ENST00000498653 ATN1P54259 1190 aaPredicted RBP7.74□□□□□ -1.17
FXN-205ENST00000498653 PLCB2Q00722 1185 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 RGL3Q3MIN7 710 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 IER5LQ5T953 404 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 RGMBQ6NW40 437 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 ARMC5Q96C12 935 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 CDK19Q9BWU1 502 aa7.74□□□□□ -1.17
FXN-205ENST00000498653 GLIS2Q9BZE0 524 aaPredicted RBP7.74□□□□□ -1.17
FXN-205ENST00000498653 SRP68Q9UHB9 627 aaKnown RBP7.74□□□□□ -1.17
FXN-205ENST00000498653 COL4A5P29400 1685 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 RFC4P35249 363 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 EPS15P42566 896 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 SCNN1DP51172 638 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 NOM1Q5C9Z4 860 aaKnown RBP7.73□□□□□ -1.17
FXN-205ENST00000498653 C2CD5Q86YS7 1000 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 ZNF408Q9H9D4 720 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 CFAP54Q96N23 3096 aa7.73□□□□□ -1.17
FXN-205ENST00000498653 USP42Q9H9J4 1324 aaKnown RBP7.73□□□□□ -1.17
FXN-205ENST00000498653 GPR25O00155 361 aa7.72□□□□□ -1.17
FXN-205ENST00000498653 TBC1D8O95759 1140 aa7.72□□□□□ -1.17
FXN-205ENST00000498653 SLC10A3P09131 477 aa7.72□□□□□ -1.17
FXN-205ENST00000498653 TM4SF1P30408 202 aa7.72□□□□□ -1.17
FXN-205ENST00000498653 GPC2Q8N158 579 aa7.72□□□□□ -1.17
FXN-205ENST00000498653 CHD8Q9HCK8 2581 aa7.71□□□□□ -1.17
FXN-205ENST00000498653 KMT2BQ9UMN6 2715 aaPredicted RBP7.71□□□□□ -1.18
FXN-205ENST00000498653 FZD9O00144 591 aa7.71□□□□□ -1.18
FXN-205ENST00000498653 NKX1-1Q15270 411 aaPredicted RBP7.71□□□□□ -1.18
FXN-205ENST00000498653 SLC39A7Q92504 469 aa7.71□□□□□ -1.18
FXN-205ENST00000498653 PIGBQ92521 554 aa7.71□□□□□ -1.18
FXN-205ENST00000498653 HCN4Q9Y3Q4 1203 aa7.71□□□□□ -1.18
FXN-205ENST00000498653 MRC1P22897 1456 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
FXN-205ENST00000498653 ATP6V1AP38606 617 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 MRE11P49959 708 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 USP50Q70EL3 339 aaPredicted RBP7.7□□□□□ -1.18
FXN-205ENST00000498653 CCDC102AQ96A19 550 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 IGSF5Q9NSI5 407 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.7□□□□□ -1.18
FXN-205ENST00000498653 CNTNAP4Q9C0A0 1308 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
FXN-205ENST00000498653 CD163L1Q9NR16 1453 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 KDM3BQ7LBC6 1761 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 RPS6KA4O75676 772 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 C7P10643 843 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 FAM50AQ14320 339 aaKnown RBP7.69□□□□□ -1.18
FXN-205ENST00000498653 LRIT3Q3SXY7 679 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 OTOP1Q7RTM1 612 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 DPF3Q92784 378 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 ZNF333Q96JL9 665 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 SLC4A9Q96Q91 983 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 MFRPQ9BY79 579 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 TTC21AQ8NDW8 1320 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 ZDBF2Q9HCK1 2354 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 ZNF609O15014 1411 aa7.69□□□□□ -1.18
FXN-205ENST00000498653 C5orf42Q9H799 3197 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 H0YIN7 160 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 GTPBP6O43824 516 aaPredicted RBP7.68□□□□□ -1.18
FXN-205ENST00000498653 SEC24BO95487 1268 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 PLCG2P16885 1265 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 TJAP1Q5JTD0 557 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 ZNF277Q9NRM2 450 aaPredicted RBP7.68□□□□□ -1.18
FXN-205ENST00000498653 ALPK3Q96L96 1907 aa7.68□□□□□ -1.18
FXN-205ENST00000498653 WTIPA6NIX2 430 aaPredicted RBP7.67□□□□□ -1.18
FXN-205ENST00000498653 FKTNO75072 461 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 LMOD1P29536 600 aaPredicted RBP7.67□□□□□ -1.18
FXN-205ENST00000498653 ZNF157P51786 506 aaPredicted RBP7.67□□□□□ -1.18
FXN-205ENST00000498653 RC3H1Q5TC82 1133 aaKnown RBP7.67□□□□□ -1.18
FXN-205ENST00000498653 DLK2Q6UY11 383 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 MAFAQ8NHW3 353 aaPredicted RBP7.67□□□□□ -1.18
FXN-205ENST00000498653 SHISA4Q96DD7 197 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 R3HDMLQ9H3Y0 253 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 STAP2Q9UGK3 403 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 ASAP1Q9ULH1 1129 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 TRIM17Q9Y577 477 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 MAP3K19Q56UN5 1328 aa7.67□□□□□ -1.18
FXN-205ENST00000498653 WDFY4Q6ZS81 3184 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 BCAMP50895 628 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 RASAL3Q86YV0 1011 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 ZNF622Q969S3 477 aaKnown RBP eCLIP7.66□□□□□ -1.18
FXN-205ENST00000498653 OCEL1Q9H607 264 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 PGAP2Q9UHJ9 254 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 EPG5Q9HCE0 2579 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 TTC21BQ7Z4L5 1316 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 TJP1Q07157 1748 aa7.66□□□□□ -1.18
FXN-205ENST00000498653 G3V3G9 751 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 KRT37O76014 449 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 NFIXQ14938 502 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 PRPF40BQ6NWY9 871 aaKnown RBP7.65□□□□□ -1.18
FXN-205ENST00000498653 UBE2Q1Q7Z7E8 422 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 FBXO22Q8NEZ5 403 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 SNED1Q8TER0 1413 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 CFHR5Q9BXR6 569 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 PCDH11XQ9BZA7 1347 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 PCDH11YQ9BZA8 1340 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 METRNQ9UJH8 293 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 PTPN22Q9Y2R2 807 aa7.65□□□□□ -1.18
FXN-205ENST00000498653 IRS2Q9Y4H2 1338 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms