RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 BEGAINQ9BUH8 593 aa25.11■■□□□ 1.61
ACTN4-208ENST00000497637 TNNQ9UQP3 1299 aa25.11■■□□□ 1.61
ACTN4-208ENST00000497637 NRXN2Q9P2S2 1712 aa25.11■■□□□ 1.61
ACTN4-208ENST00000497637 WDR33Q9C0J8 1336 aaKnown RBP25.11■■□□□ 1.61
ACTN4-208ENST00000497637 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
ACTN4-208ENST00000497637 ADAMTS7Q9UKP4 1686 aa25.1■■□□□ 1.61
ACTN4-208ENST00000497637 COL15A1P39059 1388 aa25.09■■□□□ 1.61
ACTN4-208ENST00000497637 CEMIPQ8WUJ3 1361 aa25.09■■□□□ 1.61
ACTN4-208ENST00000497637 ELL2O00472 640 aaPredicted RBP25.09■■□□□ 1.61
ACTN4-208ENST00000497637 CYP19A1P11511 503 aaPredicted RBP25.09■■□□□ 1.61
ACTN4-208ENST00000497637 TRIM27P14373 513 aa25.09■■□□□ 1.61
ACTN4-208ENST00000497637 TAF7Q15545 349 aaPredicted RBP25.09■■□□□ 1.61
ACTN4-208ENST00000497637 DICER1Q9UPY3 1922 aaKnown RBP25.08■■□□□ 1.61
ACTN4-208ENST00000497637 AFDNP55196 1824 aaKnown RBP25.08■■□□□ 1.61
ACTN4-208ENST00000497637 MVPQ14764 893 aaKnown RBP25.08■■□□□ 1.61
ACTN4-208ENST00000497637 CNKSR1Q969H4 720 aa25.08■■□□□ 1.61
ACTN4-208ENST00000497637 BCL2L12Q9HB09 334 aa25.08■■□□□ 1.61
ACTN4-208ENST00000497637 ZNF219Q9P2Y4 722 aaPredicted RBP25.08■■□□□ 1.61
ACTN4-208ENST00000497637 EAPPQ56P03 285 aaPredicted RBP25.07■■□□□ 1.6
ACTN4-208ENST00000497637 PNMA8AQ86V59 439 aaPredicted RBP25.07■■□□□ 1.6
ACTN4-208ENST00000497637 FTSJ3Q8IY81 847 aaKnown RBP25.07■■□□□ 1.6
ACTN4-208ENST00000497637 CLEC11AQ9Y240 323 aa25.07■■□□□ 1.6
ACTN4-208ENST00000497637 CLUAP1Q96AJ1 413 aa25.06■■□□□ 1.6
ACTN4-208ENST00000497637 TSHZ2Q9NRE2 1034 aa25.06■■□□□ 1.6
ACTN4-208ENST00000497637 VIRMAQ69YN4 1812 aaKnown RBP25.06■■□□□ 1.6
ACTN4-208ENST00000497637 CARMIL3Q8ND23 1372 aa25.05■■□□□ 1.6
ACTN4-208ENST00000497637 MIS18AQ9NYP9 233 aa25.05■■□□□ 1.6
ACTN4-208ENST00000497637 HACL1Q9UJ83 578 aa25.05■■□□□ 1.6
ACTN4-208ENST00000497637 ABT1Q9ULW3 272 aaKnown RBP25.05■■□□□ 1.6
ACTN4-208ENST00000497637 TJP1Q07157 1748 aa25.05■■□□□ 1.6
ACTN4-208ENST00000497637 CENPQQ7L2Z9 268 aaPredicted RBP25.04■■□□□ 1.6
ACTN4-208ENST00000497637 CNTROBQ8N137 903 aa25.04■■□□□ 1.6
ACTN4-208ENST00000497637 SCN4AP35499 1836 aa25.03■■□□□ 1.6
ACTN4-208ENST00000497637 A0A087WZG4 1122 aa25.03■■□□□ 1.6
ACTN4-208ENST00000497637 ECE1P42892 770 aa25.03■■□□□ 1.6
ACTN4-208ENST00000497637 BICDL1Q6ZP65 573 aa25.03■■□□□ 1.6
ACTN4-208ENST00000497637 ZBTB1Q9Y2K1 713 aa25.03■■□□□ 1.6
ACTN4-208ENST00000497637 FER1L6Q2WGJ9 1857 aa25.02■■□□□ 1.6
ACTN4-208ENST00000497637 RNMTO43148 476 aaKnown RBP25.02■■□□□ 1.6
ACTN4-208ENST00000497637 KRT24Q2M2I5 525 aa25.02■■□□□ 1.6
ACTN4-208ENST00000497637 STYK1Q6J9G0 422 aa25.02■■□□□ 1.6
ACTN4-208ENST00000497637 EPHX2P34913 555 aa25.01■■□□□ 1.59
ACTN4-208ENST00000497637 VSIG10Q8N0Z9 540 aa25.01■■□□□ 1.59
ACTN4-208ENST00000497637 API5Q9BZZ5 524 aaKnown RBP25.01■■□□□ 1.59
ACTN4-208ENST00000497637 LGR6Q9HBX8 967 aa25.01■■□□□ 1.59
ACTN4-208ENST00000497637 SLC52A2Q9HAB3 445 aa25■■□□□ 1.59
ACTN4-208ENST00000497637 DDX19BQ9UMR2 479 aa25■■□□□ 1.59
ACTN4-208ENST00000497637 PDE4DIPQ5VU43 2346 aa25■■□□□ 1.59
ACTN4-208ENST00000497637 PRPF40BQ6NWY9 871 aaKnown RBP24.99■■□□□ 1.59
ACTN4-208ENST00000497637 TMEM57Q8N5G2 664 aa24.99■■□□□ 1.59
ACTN4-208ENST00000497637 PRR5LQ6MZQ0 368 aa24.98■■□□□ 1.59
ACTN4-208ENST00000497637 TCERG1O14776 1098 aaKnown RBP24.97■■□□□ 1.59
ACTN4-208ENST00000497637 STARD3NLO95772 234 aa24.97■■□□□ 1.59
ACTN4-208ENST00000497637 MAP1SQ66K74 1059 aaPredicted RBP24.97■■□□□ 1.59
ACTN4-208ENST00000497637 MASTLQ96GX5 879 aa24.97■■□□□ 1.59
ACTN4-208ENST00000497637 CAPNS2Q96L46 248 aa24.97■■□□□ 1.59
ACTN4-208ENST00000497637 GPR101Q96P66 508 aaPredicted RBP24.97■■□□□ 1.59
ACTN4-208ENST00000497637 NPHP1O15259 732 aa24.96■■□□□ 1.59
ACTN4-208ENST00000497637 CA12O43570 354 aa24.96■■□□□ 1.59
ACTN4-208ENST00000497637 SRGNP10124 158 aa24.96■■□□□ 1.59
ACTN4-208ENST00000497637 TBC1D9BQ66K14 1250 aa24.96■■□□□ 1.59
ACTN4-208ENST00000497637 ABCC4O15439 1325 aa24.95■■□□□ 1.58
ACTN4-208ENST00000497637 EIF5P55010 431 aaKnown RBP24.95■■□□□ 1.58
ACTN4-208ENST00000497637 TEFQ10587 303 aa24.95■■□□□ 1.58
ACTN4-208ENST00000497637 CCDC93Q567U6 631 aa24.95■■□□□ 1.58
ACTN4-208ENST00000497637 ITPRIPQ8IWB1 547 aa24.95■■□□□ 1.58
ACTN4-208ENST00000497637 CHMP4BQ9H444 224 aaKnown RBP24.95■■□□□ 1.58
ACTN4-208ENST00000497637 DDX21Q9NR30 783 aaKnown RBP eCLIP24.95■■□□□ 1.58
ACTN4-208ENST00000497637 CNBD1Q8NA66 436 aa24.94■■□□□ 1.58
ACTN4-208ENST00000497637 MAP2K2P36507 400 aa24.93■■□□□ 1.58
ACTN4-208ENST00000497637 ST5P78524 1137 aa24.93■■□□□ 1.58
ACTN4-208ENST00000497637 PAXIP1Q6ZW49 1069 aaPredicted RBP24.93■■□□□ 1.58
ACTN4-208ENST00000497637 PCDHB15Q9Y5E8 787 aa24.93■■□□□ 1.58
ACTN4-208ENST00000497637 PTPRCP08575 1304 aa24.92■■□□□ 1.58
ACTN4-208ENST00000497637 IGHDP01880 384 aa24.92■■□□□ 1.58
ACTN4-208ENST00000497637 EIF4A1P60842 406 aaKnown RBP24.92■■□□□ 1.58
ACTN4-208ENST00000497637 SLC39A6Q13433 755 aa24.92■■□□□ 1.58
ACTN4-208ENST00000497637 SETDB2Q96T68 719 aa24.92■■□□□ 1.58
ACTN4-208ENST00000497637 ZNF541Q9H0D2 1346 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 HOXB7P09629 217 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 FKBP4Q02790 459 aaKnown RBP eCLIP24.91■■□□□ 1.58
ACTN4-208ENST00000497637 CCDC30Q5VVM6 783 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 GPC2Q8N158 579 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 C7orf43Q8WVR3 580 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 CHMP4AQ9BY43 222 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 MCOLN1Q9GZU1 580 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 ZBTB40Q9NUA8 1239 aa24.91■■□□□ 1.58
ACTN4-208ENST00000497637 BTBD11A6QL63 1104 aa24.9■■□□□ 1.58
ACTN4-208ENST00000497637 RTKN2Q8IZC4 609 aa24.9■■□□□ 1.58
ACTN4-208ENST00000497637 CCDC24Q8N4L8 307 aa24.9■■□□□ 1.58
ACTN4-208ENST00000497637 SLC4A2P04920 1241 aa24.89■■□□□ 1.58
ACTN4-208ENST00000497637 RWDD1Q9H446 243 aaPredicted RBP24.89■■□□□ 1.58
ACTN4-208ENST00000497637 ADAMTSL1Q8N6G6 1762 aa24.88■■□□□ 1.57
ACTN4-208ENST00000497637 ANKRD31Q8N7Z5 1873 aa24.88■■□□□ 1.57
ACTN4-208ENST00000497637 FZD9O00144 591 aa24.88■■□□□ 1.57
ACTN4-208ENST00000497637 NPM2Q86SE8 214 aaKnown RBP24.88■■□□□ 1.57
ACTN4-208ENST00000497637 STK31Q9BXU1 1019 aa24.88■■□□□ 1.57
ACTN4-208ENST00000497637 ZNF277Q9NRM2 450 aaPredicted RBP24.88■■□□□ 1.57
ACTN4-208ENST00000497637 SLX4Q8IY92 1834 aa24.87■■□□□ 1.57
ACTN4-208ENST00000497637 INTS3Q68E01 1043 aaKnown RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms