RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 ALDH1B1P30837 517 aa14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 C1QTNF8P60827 252 aa14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 PPP1R42Q7Z4L9 355 aa14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 CRAMP1Q96RY5 1269 aa14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 ANKRD36CQ5JPF3 1778 aa14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 TNRC6CQ9HCJ0 1690 aaKnown RBP14.13□□□□□ -0.15
SHROOM3-210ENST00000497440 AIMP1Q12904 312 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 SOGA3Q5TF21 947 aa14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 C3orf67Q6ZVT6 689 aa14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 TSR2Q969E8 191 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 UTP14AQ9BVJ6 771 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 PHAXQ9H814 394 aaKnown RBP14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 SPINK5Q9NQ38 1064 aaPredicted RBP14.12□□□□□ -0.15
SHROOM3-210ENST00000497440 ELL2O00472 640 aaPredicted RBP14.11□□□□□ -0.15
SHROOM3-210ENST00000497440 RASSF7Q02833 373 aa14.11□□□□□ -0.15
SHROOM3-210ENST00000497440 CCDC30Q5VVM6 783 aa14.11□□□□□ -0.15
SHROOM3-210ENST00000497440 GPBP1L1Q9HC44 474 aaPredicted RBP14.11□□□□□ -0.15
SHROOM3-210ENST00000497440 DICER1Q9UPY3 1922 aaKnown RBP14.11□□□□□ -0.15
SHROOM3-210ENST00000497440 FAM177BA6PVY3 158 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 VAMP4O75379 141 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 SYNE4Q8N205 404 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 RNF181Q9P0P0 153 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 FANCIQ9NVI1 1328 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 CCDC88AQ3V6T2 1871 aa14.1□□□□□ -0.15
SHROOM3-210ENST00000497440 CCER2I3L3R5 266 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 NPHP1O15259 732 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 GTF2E1P29083 439 aaPredicted RBP14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 GRIPAP1Q4V328 841 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 CC2D2BQ6DHV5 1058 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 CACNA1FO60840 1977 aa14.09□□□□□ -0.15
SHROOM3-210ENST00000497440 SF3B3Q15393 1217 aaKnown RBP14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 RTKN2Q8IZC4 609 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 FAM9BQ8IZU0 186 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 PSMD1Q99460 953 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 TAOK3Q9H2K8 898 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 SH3TC1Q8TE82 1336 aa14.08□□□□□ -0.16
SHROOM3-210ENST00000497440 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
SHROOM3-210ENST00000497440 CCDC191Q8NCU4 936 aa14.07□□□□□ -0.16
SHROOM3-210ENST00000497440 METTL22Q9BUU2 404 aaPredicted RBP14.07□□□□□ -0.16
SHROOM3-210ENST00000497440 TRMT112Q9UI30 125 aaKnown RBP14.07□□□□□ -0.16
SHROOM3-210ENST00000497440 SENP3-EIF4A1A0A087X0R7 540 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 POTECB2RU33 542 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 BBOX1O75936 387 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 FKBP4Q02790 459 aaKnown RBP eCLIP14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 KSR2Q6VAB6 950 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 NMRK2Q9NPI5 230 aa14.06□□□□□ -0.16
SHROOM3-210ENST00000497440 PCNTO95613 3336 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 LAMB2P55268 1798 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 ATP5J2-PTCD1G3V325 749 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 TOMM70O94826 608 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 IGKV5-2P06315 115 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 HCLS1P14317 486 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 EXOSC9Q06265 439 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 GOLGA2Q08379 1002 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 G2E3Q7L622 706 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 TRMT2AQ8IZ69 625 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 RBM17Q96I25 401 aaKnown RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 RTFDC1Q9BY42 306 aaPredicted RBP14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 ATP6V0A2Q9Y487 856 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 KDM2BQ8NHM5 1336 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 CACNA1SQ13698 1873 aa14.05□□□□□ -0.16
SHROOM3-210ENST00000497440 DDX60Q8IY21 1712 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 PI4KAP2A4QPH2 592 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 SLC4A2P04920 1241 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 RIC3Q7Z5B4 369 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 PI4KAP1Q8N8J0 262 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 FAM89AQ96GI7 184 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 VPS33BQ9H267 617 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 ABCC4O15439 1325 aa14.04□□□□□ -0.16
SHROOM3-210ENST00000497440 FZD9O00144 591 aa14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 DDX58O95786 925 aaKnown RBP14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 PCCAP05165 728 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 SP8Q8IXZ3 490 aa14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 ZNF526Q8TF50 670 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 ZNF219Q9P2Y4 722 aaPredicted RBP14.03□□□□□ -0.16
SHROOM3-210ENST00000497440 WDR90Q96KV7 1748 aa14.02□□□□□ -0.16
SHROOM3-210ENST00000497440 SLC51AQ86UW1 340 aa14.02□□□□□ -0.17
SHROOM3-210ENST00000497440 MYH16Q9H6N6 1097 aa14.02□□□□□ -0.17
SHROOM3-210ENST00000497440 MAP3K2Q9Y2U5 619 aa14.02□□□□□ -0.17
SHROOM3-210ENST00000497440 SALL2Q9Y467 1007 aaPredicted RBP14.02□□□□□ -0.17
SHROOM3-210ENST00000497440 CDHR2Q9BYE9 1310 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 IRS4O14654 1257 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 PPEF1O14829 653 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 FLIIQ13045 1269 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 GRAPQ13588 217 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 TMC4Q7Z404 712 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 RBM46Q8TBY0 533 aaKnown RBP14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 GRAPLQ8TC17 118 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 L3MBTL3Q96JM7 780 aaPredicted RBP14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 MYD88Q99836 296 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 STK31Q9BXU1 1019 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 TIAM2Q8IVF5 1701 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 COL4A5P29400 1685 aa14.01□□□□□ -0.17
SHROOM3-210ENST00000497440 NEURL1BA8MQ27 555 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms