RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 PLVAPQ9BX97 442 aa8.95□□□□□ -0.98
GGPS1-208ENST00000497327 PPP1R12CQ9BZL4 782 aa8.95□□□□□ -0.98
GGPS1-208ENST00000497327 CHMP3Q9Y3E7 222 aa8.95□□□□□ -0.98
GGPS1-208ENST00000497327 CFTRP13569 1480 aa8.95□□□□□ -0.98
GGPS1-208ENST00000497327 PTK7Q13308 1070 aa8.94□□□□□ -0.98
GGPS1-208ENST00000497327 ALDH16A1Q8IZ83 802 aa8.94□□□□□ -0.98
GGPS1-208ENST00000497327 SCG3Q8WXD2 468 aaKnown RBP8.94□□□□□ -0.98
GGPS1-208ENST00000497327 CEP63Q96MT8 703 aa8.94□□□□□ -0.98
GGPS1-208ENST00000497327 ANKIB1Q9P2G1 1089 aa8.94□□□□□ -0.98
GGPS1-208ENST00000497327 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
GGPS1-208ENST00000497327 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
GGPS1-208ENST00000497327 CADPSQ9ULU8 1353 aa8.93□□□□□ -0.98
GGPS1-208ENST00000497327 K7ELQ4 463 aaPredicted RBP8.92□□□□□ -0.98
GGPS1-208ENST00000497327 ALAS2P22557 587 aa8.92□□□□□ -0.98
GGPS1-208ENST00000497327 RBM19Q9Y4C8 960 aaKnown RBP8.92□□□□□ -0.98
GGPS1-208ENST00000497327 ALBP02768 609 aa8.91□□□□□ -0.98
GGPS1-208ENST00000497327 FURINP09958 794 aa8.91□□□□□ -0.98
GGPS1-208ENST00000497327 DPYDQ12882 1025 aa8.91□□□□□ -0.98
GGPS1-208ENST00000497327 BTLAQ7Z6A9 289 aa8.91□□□□□ -0.98
GGPS1-208ENST00000497327 CALR3Q96L12 384 aaKnown RBP8.91□□□□□ -0.98
GGPS1-208ENST00000497327 PRDM6Q9NQX0 595 aa8.91□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L15C9J2P7 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L10C9JJH3 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L13C9JLJ4 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L12C9JPN9 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L11C9JVI0 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L21D6R901 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L18D6R9N7 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L22D6RA61 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L17D6RBQ6 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L19D6RCP7 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L20D6RJB6 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 M0R082 166 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 LGR5O75473 907 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 ADH7P40394 386 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 USP17L24Q0WX57 530 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 LARP1Q6PKG0 1096 aaKnown RBP8.9□□□□□ -0.98
GGPS1-208ENST00000497327 C8orf86Q6ZUL3 223 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 MICALL1Q8N3F8 863 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 NGLY1Q96IV0 654 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 ZNF587Q96SQ5 575 aaPredicted RBP8.9□□□□□ -0.98
GGPS1-208ENST00000497327 BCS1LQ9Y276 419 aa8.9□□□□□ -0.98
GGPS1-208ENST00000497327 FAM196BA6NMK8 535 aa8.89□□□□□ -0.99
GGPS1-208ENST00000497327 SPATA31C1P0DKV0 1188 aa8.89□□□□□ -0.99
GGPS1-208ENST00000497327 C20orf204Q6ZNR8 217 aa8.89□□□□□ -0.99
GGPS1-208ENST00000497327 CHMP7Q8WUX9 453 aaPredicted RBP8.89□□□□□ -0.99
GGPS1-208ENST00000497327 ARXQ96QS3 562 aa8.89□□□□□ -0.99
GGPS1-208ENST00000497327 DMGDHQ9UI17 866 aaKnown RBP8.89□□□□□ -0.99
GGPS1-208ENST00000497327 IGFBP4P22692 258 aa8.88□□□□□ -0.99
GGPS1-208ENST00000497327 RTN1Q16799 776 aa8.88□□□□□ -0.99
GGPS1-208ENST00000497327 IER5Q5VY09 327 aa8.88□□□□□ -0.99
GGPS1-208ENST00000497327 ANKMY2Q8IV38 441 aa8.88□□□□□ -0.99
GGPS1-208ENST00000497327 NID1P14543 1247 aa8.87□□□□□ -0.99
GGPS1-208ENST00000497327 GRNP28799 593 aaKnown RBP8.87□□□□□ -0.99
GGPS1-208ENST00000497327 BHMTQ93088 406 aa8.87□□□□□ -0.99
GGPS1-208ENST00000497327 HINFPQ9BQA5 517 aa8.87□□□□□ -0.99
GGPS1-208ENST00000497327 TGFBR3LH3BV60 316 aa8.86□□□□□ -0.99
GGPS1-208ENST00000497327 LMOD1P29536 600 aaPredicted RBP8.86□□□□□ -0.99
GGPS1-208ENST00000497327 NEUROD1Q13562 356 aa8.86□□□□□ -0.99
GGPS1-208ENST00000497327 HIF1AQ16665 826 aa8.86□□□□□ -0.99
GGPS1-208ENST00000497327 CFAP70Q5T0N1 1121 aa8.86□□□□□ -0.99
GGPS1-208ENST00000497327 FAM229AH3BQW9 127 aa8.85□□□□□ -0.99
GGPS1-208ENST00000497327 ITGB7P26010 798 aa8.85□□□□□ -0.99
GGPS1-208ENST00000497327 GSX2Q9BZM3 304 aa8.85□□□□□ -0.99
GGPS1-208ENST00000497327 VRTNQ9H8Y1 702 aa8.85□□□□□ -0.99
GGPS1-208ENST00000497327 WRNQ14191 1432 aaPredicted RBP eCLIP8.85□□□□□ -0.99
GGPS1-208ENST00000497327 ABCC8Q09428 1581 aa8.85□□□□□ -0.99
GGPS1-208ENST00000497327 NESP48681 1621 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 SPDYE3A6NKU9 549 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 WEE1P30291 646 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 DOC2BQ14184 412 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 XP32Q5T750 250 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 QTRT2Q9H974 415 aaKnown RBP8.83□□□□□ -1
GGPS1-208ENST00000497327 SLC6A14Q9UN76 642 aa8.83□□□□□ -1
GGPS1-208ENST00000497327 GATA4P43694 442 aa8.82□□□□□ -1
GGPS1-208ENST00000497327 PRRT3Q5FWE3 981 aa8.82□□□□□ -1
GGPS1-208ENST00000497327 UBE2OQ9C0C9 1292 aaKnown RBP8.82□□□□□ -1
GGPS1-208ENST00000497327 EFCC1Q9HA90 598 aa8.82□□□□□ -1
GGPS1-208ENST00000497327 KLK14Q9P0G3 267 aa8.82□□□□□ -1
GGPS1-208ENST00000497327 LAMC3Q9Y6N6 1575 aa8.82□□□□□ -1
GGPS1-208ENST00000497327 NAGPAQ9UK23 515 aa8.81□□□□□ -1
GGPS1-208ENST00000497327 FOXO3O43524 673 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 NFKB1P19838 968 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 INPP5BP32019 993 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 ILDR2Q71H61 639 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 DNAJB12Q9NXW2 375 aaKnown RBP8.8□□□□□ -1
GGPS1-208ENST00000497327 FANCD2Q9BXW9 1451 aa8.8□□□□□ -1
GGPS1-208ENST00000497327 LILRB5O75023 590 aa8.79□□□□□ -1
GGPS1-208ENST00000497327 IDH3AP50213 366 aa8.79□□□□□ -1
GGPS1-208ENST00000497327 CCINQ13939 588 aa8.79□□□□□ -1
GGPS1-208ENST00000497327 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
GGPS1-208ENST00000497327 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.79□□□□□ -1
GGPS1-208ENST00000497327 SYNJ1O43426 1573 aa8.78□□□□□ -1
GGPS1-208ENST00000497327 TRIM28Q13263 835 aaKnown RBP8.78□□□□□ -1
GGPS1-208ENST00000497327 DGKZQ13574 1117 aa8.78□□□□□ -1
GGPS1-208ENST00000497327 GRIK4Q16099 956 aa8.78□□□□□ -1
GGPS1-208ENST00000497327 MYO19Q96H55 970 aa8.78□□□□□ -1
GGPS1-208ENST00000497327 IGFLR1Q9H665 355 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms