RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ANKRD36CQ5JPF3 1778 aa19.66■□□□□ 0.74
NEK4-206ENST00000496822 POTECB2RU33 542 aa19.66■□□□□ 0.74
NEK4-206ENST00000496822 ZNF853P0CG23 659 aa19.66■□□□□ 0.74
NEK4-206ENST00000496822 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
NEK4-206ENST00000496822 ZNF277Q9NRM2 450 aaPredicted RBP19.66■□□□□ 0.74
NEK4-206ENST00000496822 HOXB7P09629 217 aa19.65■□□□□ 0.74
NEK4-206ENST00000496822 ALDH1B1P30837 517 aa19.65■□□□□ 0.74
NEK4-206ENST00000496822 DUSP27Q5VZP5 1158 aa19.65■□□□□ 0.74
NEK4-206ENST00000496822 PPP1R42Q7Z4L9 355 aa19.65■□□□□ 0.74
NEK4-206ENST00000496822 VEGFAP15692 232 aaPredicted RBP19.64■□□□□ 0.73
NEK4-206ENST00000496822 HOXA10P31260 410 aaPredicted RBP19.64■□□□□ 0.73
NEK4-206ENST00000496822 NLRP10Q86W26 655 aa19.64■□□□□ 0.73
NEK4-206ENST00000496822 RPGRQ92834 1020 aaKnown RBP19.64■□□□□ 0.73
NEK4-206ENST00000496822 UTP14AQ9BVJ6 771 aaKnown RBP19.64■□□□□ 0.73
NEK4-206ENST00000496822 APLP1P51693 650 aa19.63■□□□□ 0.73
NEK4-206ENST00000496822 FSTL1Q12841 308 aa19.63■□□□□ 0.73
NEK4-206ENST00000496822 DPY19L2Q6NUT2 758 aa19.63■□□□□ 0.73
NEK4-206ENST00000496822 ZNF428Q96B54 188 aa19.63■□□□□ 0.73
NEK4-206ENST00000496822 IFT57Q9NWB7 429 aa19.63■□□□□ 0.73
NEK4-206ENST00000496822 DDNO94850 711 aaPredicted RBP19.62■□□□□ 0.73
NEK4-206ENST00000496822 HSP90AB3PQ58FF7 597 aa19.62■□□□□ 0.73
NEK4-206ENST00000496822 RTKN2Q8IZC4 609 aa19.62■□□□□ 0.73
NEK4-206ENST00000496822 SYNE4Q8N205 404 aa19.62■□□□□ 0.73
NEK4-206ENST00000496822 ZNF541Q9H0D2 1346 aa19.61■□□□□ 0.73
NEK4-206ENST00000496822 ZNF316A6NFI3 1004 aaPredicted RBP19.61■□□□□ 0.73
NEK4-206ENST00000496822 HTRA3P83110 453 aa19.61■□□□□ 0.73
NEK4-206ENST00000496822 TCIRG1Q13488 830 aa19.61■□□□□ 0.73
NEK4-206ENST00000496822 DBF4Q9UBU7 674 aaPredicted RBP19.61■□□□□ 0.73
NEK4-206ENST00000496822 COL4A5P29400 1685 aa19.6■□□□□ 0.73
NEK4-206ENST00000496822 GNAI1P63096 354 aa19.6■□□□□ 0.73
NEK4-206ENST00000496822 SLC10A5Q5PT55 438 aa19.6■□□□□ 0.73
NEK4-206ENST00000496822 SMC1BQ8NDV3 1235 aa19.6■□□□□ 0.73
NEK4-206ENST00000496822 RBM17Q96I25 401 aaKnown RBP19.6■□□□□ 0.73
NEK4-206ENST00000496822 CRAMP1Q96RY5 1269 aa19.6■□□□□ 0.73
NEK4-206ENST00000496822 RNF123Q5XPI4 1314 aa19.59■□□□□ 0.73
NEK4-206ENST00000496822 ELL2O00472 640 aaPredicted RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 PPEF1O14829 653 aaPredicted RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 HCLS1P14317 486 aaPredicted RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 IARSP41252 1262 aaKnown RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 CALD1Q05682 793 aaKnown RBP19.59■□□□□ 0.73
NEK4-206ENST00000496822 PLBD2Q8NHP8 589 aa19.59■□□□□ 0.73
NEK4-206ENST00000496822 NLRP3Q96P20 1036 aa19.59■□□□□ 0.73
NEK4-206ENST00000496822 LAMB2P55268 1798 aa19.59■□□□□ 0.73
NEK4-206ENST00000496822 ABCC4O15439 1325 aa19.58■□□□□ 0.73
NEK4-206ENST00000496822 C8orf58Q8NAV2 365 aa19.58■□□□□ 0.72
NEK4-206ENST00000496822 PSMD1Q99460 953 aa19.58■□□□□ 0.72
NEK4-206ENST00000496822 HYPKQ9NX55 129 aa19.58■□□□□ 0.72
NEK4-206ENST00000496822 TRMT112Q9UI30 125 aaKnown RBP19.58■□□□□ 0.72
NEK4-206ENST00000496822 ANKRD13DQ6ZTN6 518 aa19.57■□□□□ 0.72
NEK4-206ENST00000496822 DNAJC5GQ8N7S2 189 aa19.57■□□□□ 0.72
NEK4-206ENST00000496822 SH3TC1Q8TE82 1336 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 ATP5J2-PTCD1G3V325 749 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 POTEIP0CG38 1075 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 POTEJP0CG39 1038 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 CC2D2BQ6DHV5 1058 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 ISCA1Q9BUE6 129 aa19.56■□□□□ 0.72
NEK4-206ENST00000496822 PHAXQ9H814 394 aaKnown RBP19.56■□□□□ 0.72
NEK4-206ENST00000496822 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
NEK4-206ENST00000496822 L3MBTL3Q96JM7 780 aaPredicted RBP19.55■□□□□ 0.72
NEK4-206ENST00000496822 MRS2Q9HD23 443 aa19.55■□□□□ 0.72
NEK4-206ENST00000496822 DDX60Q8IY21 1712 aaKnown RBP19.54■□□□□ 0.72
NEK4-206ENST00000496822 FZD9O00144 591 aa19.54■□□□□ 0.72
NEK4-206ENST00000496822 TSPYL6Q8N831 410 aa19.54■□□□□ 0.72
NEK4-206ENST00000496822 ANP32CO43423 234 aa19.53■□□□□ 0.72
NEK4-206ENST00000496822 FAM89AQ96GI7 184 aa19.53■□□□□ 0.72
NEK4-206ENST00000496822 ATP6V0A2Q9Y487 856 aa19.53■□□□□ 0.72
NEK4-206ENST00000496822 COL4A1P02462 1669 aa19.52■□□□□ 0.72
NEK4-206ENST00000496822 CCDC27Q2M243 656 aa19.52■□□□□ 0.72
NEK4-206ENST00000496822 RTL5Q5HYW3 569 aaPredicted RBP19.52■□□□□ 0.72
NEK4-206ENST00000496822 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
NEK4-206ENST00000496822 GOLGA2Q08379 1002 aa19.51■□□□□ 0.71
NEK4-206ENST00000496822 TAF1DQ9H5J8 278 aaPredicted RBP19.51■□□□□ 0.71
NEK4-206ENST00000496822 IQCA1LA6NCM1 817 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 GRAPQ13588 217 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 GRIPAP1Q4V328 841 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 DDX46Q7L014 1031 aaKnown RBP19.5■□□□□ 0.71
NEK4-206ENST00000496822 RIC3Q7Z5B4 369 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 LARGE2Q8N3Y3 721 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 GRAPLQ8TC17 118 aaPredicted RBP19.5■□□□□ 0.71
NEK4-206ENST00000496822 JDP2Q8WYK2 163 aa19.5■□□□□ 0.71
NEK4-206ENST00000496822 SCN4AP35499 1836 aa19.49■□□□□ 0.71
NEK4-206ENST00000496822 TRIM28Q13263 835 aaKnown RBP19.49■□□□□ 0.71
NEK4-206ENST00000496822 AOC3Q16853 763 aa19.49■□□□□ 0.71
NEK4-206ENST00000496822 CHADLQ6NUI6 762 aa19.49■□□□□ 0.71
NEK4-206ENST00000496822 TAF1P21675 1872 aa19.49■□□□□ 0.71
NEK4-206ENST00000496822 DUOX1Q9NRD9 1551 aa19.49■□□□□ 0.71
NEK4-206ENST00000496822 PPIP5K2O43314 1243 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 BBOX1O75936 387 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 CCDC30Q5VVM6 783 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 GPC2Q8N158 579 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 KLRG1Q96E93 195 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 MYD88Q99836 296 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 HACL1Q9UJ83 578 aa19.48■□□□□ 0.71
NEK4-206ENST00000496822 SP8Q8IXZ3 490 aa19.47■□□□□ 0.71
NEK4-206ENST00000496822 RTFDC1Q9BY42 306 aaPredicted RBP19.47■□□□□ 0.71
NEK4-206ENST00000496822 GJA3Q9Y6H8 435 aa19.47■□□□□ 0.71
NEK4-206ENST00000496822 LRRC37AA6NMS7 1700 aa19.47■□□□□ 0.71
NEK4-206ENST00000496822 LTBP1Q14766 1721 aa19.47■□□□□ 0.71
NEK4-206ENST00000496822 ADAMTSL1Q8N6G6 1762 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms