RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ETF1P62495 437 aaKnown RBP9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 FAM76AQ8TAV0 307 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 ZSWIM4Q9H7M6 989 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 PDE11AQ9HCR9 933 aa9.46□□□□□ -0.9
CRNKL1-205ENST00000496549 LARP1BQ659C4 914 aaKnown RBP9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 IQCA1Q86XH1 822 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 IQUBQ8NA54 791 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC151A5D8V7 595 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 SCP2P22307 547 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 CDC25BP30305 580 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 LONRF2Q1L5Z9 754 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 SAAL1Q96ER3 474 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC97Q96F63 343 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 MPHOSPH8Q99549 860 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 SERPINC1P01008 464 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 CC2D1AQ6P1N0 951 aaPredicted RBP9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 STAG1Q8WVM7 1258 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 DACT1Q9NYF0 836 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 SH3BP1Q9Y3L3 701 aa9.45□□□□□ -0.9
CRNKL1-205ENST00000496549 SPAG9O60271 1321 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 A6NNZ2 444 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 CRYMQ14894 314 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 TUBB8Q3ZCM7 444 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 SPATS2Q86XZ4 545 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC12Q8WUD4 166 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 SSH1Q8WYL5 1049 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 RABGGTAQ92696 567 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 TSR2Q969E8 191 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 POLR1AO95602 1720 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 EPRSP07814 1512 aaKnown RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 PSMD2Q13200 908 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 MRFAP1L1Q96HT8 127 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC114Q96M63 670 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 IMPACTQ9P2X3 320 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 SLC8A1P32418 973 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 KIF4BQ2VIQ3 1234 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 ZSCAN31Q96LW9 406 aaPredicted RBP9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 KIF2CQ99661 725 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 INCENPQ9NQS7 918 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 ETAA1Q9NY74 926 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 PPP6R1Q9UPN7 881 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 FAN1Q9Y2M0 1017 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 DISP1Q96F81 1524 aa9.44□□□□□ -0.9
CRNKL1-205ENST00000496549 KIF5CO60282 957 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 ZKSCAN1P17029 563 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 HNRNPH1P31943 449 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 GSCP56915 257 aaPredicted RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 USP16Q9Y5T5 823 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 FRMD3A2A2Y4 597 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 CCT5P48643 541 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 AKAP17AQ02040 695 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 ENOX2Q16206 610 aaKnown RBP9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 ZBTB40Q9NUA8 1239 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 TTC41PQ6P2S7 1318 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 CTTNBP2Q8WZ74 1663 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 NDUFAB1O14561 156 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 ISM2Q6H9L7 571 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 ITFG2Q969R8 447 aa9.43□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC148Q8NFR7 591 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 TDRD7Q8NHU6 1098 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 MIEF2Q96C03 454 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 BICC1Q9H694 974 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 CFAP45Q9UL16 551 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 TRAK1Q9UPV9 953 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 PHLPP2Q6ZVD8 1323 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 CFAP43Q8NDM7 1665 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 APOBRQ0VD83 1088 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 DBN1Q16643 649 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 MIPOL1Q8TD10 442 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 MICAL1Q8TDZ2 1067 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 FAM204AQ9H8W3 233 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 LIMCH1Q9UPQ0 1083 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 ZDHHC9Q9Y397 364 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 NPHP3Q7Z494 1330 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 RTEL1-TNFRSF6BF6WH68 1400 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 CHMP4BP1P59074 171 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC121Q6ZUS5 278 aa9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 SUPT6HQ7KZ85 1726 aaKnown RBP9.42□□□□□ -0.9
CRNKL1-205ENST00000496549 KIF14Q15058 1648 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CCDC181Q5TID7 509 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 EHBP1L1Q8N3D4 1523 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 TMEM87AQ8NBN3 555 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CAGE1Q8TC20 777 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 GOPCQ9HD26 462 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 FAM169AQ9Y6X4 670 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 PIK3C2GO75747 1445 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CTAGE15A4D2H0 777 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CTAGE8P0CG41 777 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 TOP1P11387 765 aaKnown RBP9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 SYT1P21579 422 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 TXLNAP40222 546 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 SNCBQ16143 134 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CFAP100Q494V2 611 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CTAGE6Q86UF2 777 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 CTAGE4Q8IX94 777 aa9.41□□□□□ -0.9
CRNKL1-205ENST00000496549 BCAS4Q8TDM0 211 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms