RNA–Protein interactions for RNA: ENST00000495988.1

APOBEC3A-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

TSL 4

Gene APOBEC3A, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-204ENST00000495988 ZNF277Q9NRM2 450 aaPredicted RBP22.11■■□□□ 1.13
APOBEC3A-204ENST00000495988 DDNO94850 711 aaPredicted RBP22.1■■□□□ 1.13
APOBEC3A-204ENST00000495988 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
APOBEC3A-204ENST00000495988 ANKRD36CQ5JPF3 1778 aa22.1■■□□□ 1.13
APOBEC3A-204ENST00000495988 HOXA10P31260 410 aaPredicted RBP22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 HTRA3P83110 453 aa22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 HSP90AB3PQ58FF7 597 aa22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 DNAJC5GQ8N7S2 189 aa22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 RBM17Q96I25 401 aaKnown RBP22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 CFAP44Q96MT7 982 aa22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 UTP14AQ9BVJ6 771 aaKnown RBP22.09■■□□□ 1.13
APOBEC3A-204ENST00000495988 HDGFL1Q5TGJ6 251 aa22.08■■□□□ 1.13
APOBEC3A-204ENST00000495988 CHPF2Q9P2E5 772 aa22.08■■□□□ 1.13
APOBEC3A-204ENST00000495988 APAF1O14727 1248 aa22.07■■□□□ 1.12
APOBEC3A-204ENST00000495988 HOXB7P09629 217 aa22.07■■□□□ 1.12
APOBEC3A-204ENST00000495988 C3orf67Q6ZVT6 689 aa22.07■■□□□ 1.12
APOBEC3A-204ENST00000495988 SYNE4Q8N205 404 aa22.07■■□□□ 1.12
APOBEC3A-204ENST00000495988 NLRP3Q96P20 1036 aa22.07■■□□□ 1.12
APOBEC3A-204ENST00000495988 IARSP41252 1262 aaKnown RBP22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 CRAMP1Q96RY5 1269 aa22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 PSMD1Q99460 953 aa22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 RNF123Q5XPI4 1314 aa22.06■■□□□ 1.12
APOBEC3A-204ENST00000495988 NLRP10Q86W26 655 aa22.05■■□□□ 1.12
APOBEC3A-204ENST00000495988 MBIPQ9NS73 344 aa22.05■■□□□ 1.12
APOBEC3A-204ENST00000495988 TCERG1O14776 1098 aaKnown RBP22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 PPEF1O14829 653 aaPredicted RBP22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 TCIRG1Q13488 830 aa22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 SLC10A5Q5PT55 438 aa22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 DUSP27Q5VZP5 1158 aa22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 DBF4Q9UBU7 674 aaPredicted RBP22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 ZNF541Q9H0D2 1346 aa22.04■■□□□ 1.12
APOBEC3A-204ENST00000495988 IQCA1LA6NCM1 817 aa22.03■■□□□ 1.12
APOBEC3A-204ENST00000495988 KLRG1Q96E93 195 aa22.03■■□□□ 1.12
APOBEC3A-204ENST00000495988 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.12
APOBEC3A-204ENST00000495988 GRIPAP1Q4V328 841 aa22.02■■□□□ 1.12
APOBEC3A-204ENST00000495988 L3MBTL3Q96JM7 780 aaPredicted RBP22.02■■□□□ 1.12
APOBEC3A-204ENST00000495988 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
APOBEC3A-204ENST00000495988 TRMT112Q9UI30 125 aaKnown RBP22.02■■□□□ 1.12
APOBEC3A-204ENST00000495988 SCN4AP35499 1836 aa22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 ZNF853P0CG23 659 aa22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 GNAI1P63096 354 aa22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 PLBD2Q8NHP8 589 aa22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 JDP2Q8WYK2 163 aa22.01■■□□□ 1.11
APOBEC3A-204ENST00000495988 LAMB2P55268 1798 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 FZD9O00144 591 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 POTEIP0CG38 1075 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 POTEJP0CG39 1038 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
APOBEC3A-204ENST00000495988 CHADLQ6NUI6 762 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 ANKRD13DQ6ZTN6 518 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 SLC51AQ86UW1 340 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 TMX4Q9H1E5 349 aaPredicted RBP22■■□□□ 1.11
APOBEC3A-204ENST00000495988 HYPKQ9NX55 129 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 ABCC4O15439 1325 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 SH3TC1Q8TE82 1336 aa22■■□□□ 1.11
APOBEC3A-204ENST00000495988 CCDC184Q52MB2 194 aa21.98■■□□□ 1.11
APOBEC3A-204ENST00000495988 ZNF428Q96B54 188 aa21.98■■□□□ 1.11
APOBEC3A-204ENST00000495988 TAF1DQ9H5J8 278 aaPredicted RBP21.98■■□□□ 1.11
APOBEC3A-204ENST00000495988 HACL1Q9UJ83 578 aa21.98■■□□□ 1.11
APOBEC3A-204ENST00000495988 ATP6V0A2Q9Y487 856 aa21.98■■□□□ 1.11
APOBEC3A-204ENST00000495988 ELL2O00472 640 aaPredicted RBP21.97■■□□□ 1.11
APOBEC3A-204ENST00000495988 LARGE2Q8N3Y3 721 aa21.97■■□□□ 1.11
APOBEC3A-204ENST00000495988 COL4A5P29400 1685 aa21.97■■□□□ 1.11
APOBEC3A-204ENST00000495988 ATP5J2-PTCD1G3V325 749 aa21.96■■□□□ 1.11
APOBEC3A-204ENST00000495988 EIF6P56537 245 aaKnown RBP21.96■■□□□ 1.11
APOBEC3A-204ENST00000495988 DDX46Q7L014 1031 aaKnown RBP21.96■■□□□ 1.11
APOBEC3A-204ENST00000495988 GPC2Q8N158 579 aa21.96■■□□□ 1.11
APOBEC3A-204ENST00000495988 ISCA1Q9BUE6 129 aa21.96■■□□□ 1.11
APOBEC3A-204ENST00000495988 BBOX1O75936 387 aa21.95■■□□□ 1.1
APOBEC3A-204ENST00000495988 EAPPQ56P03 285 aaPredicted RBP21.95■■□□□ 1.1
APOBEC3A-204ENST00000495988 LDHDQ86WU2 507 aa21.95■■□□□ 1.1
APOBEC3A-204ENST00000495988 JMYQ8N9B5 988 aa21.95■■□□□ 1.1
APOBEC3A-204ENST00000495988 EPHX2P34913 555 aa21.94■■□□□ 1.1
APOBEC3A-204ENST00000495988 GJA3Q9Y6H8 435 aa21.94■■□□□ 1.1
APOBEC3A-204ENST00000495988 PPIP5K2O43314 1243 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 GOLGA2Q08379 1002 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 RIC3Q7Z5B4 369 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 SP8Q8IXZ3 490 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 DDX60Q8IY21 1712 aaKnown RBP21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 NIM1KQ8IY84 436 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 FAM89AQ96GI7 184 aa21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 PHAXQ9H814 394 aaKnown RBP21.93■■□□□ 1.1
APOBEC3A-204ENST00000495988 GRAPQ13588 217 aa21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 AOC3Q16853 763 aa21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 C8orf58Q8NAV2 365 aa21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 SUPT20HQ8NEM7 779 aa21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 GRAPLQ8TC17 118 aaPredicted RBP21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 CLEC11AQ9Y240 323 aa21.92■■□□□ 1.1
APOBEC3A-204ENST00000495988 DPP8Q6V1X1 898 aaPredicted RBP21.91■■□□□ 1.1
APOBEC3A-204ENST00000495988 PNMA8AQ86V59 439 aaPredicted RBP21.91■■□□□ 1.1
APOBEC3A-204ENST00000495988 VPS33BQ9H267 617 aa21.91■■□□□ 1.1
APOBEC3A-204ENST00000495988 TAF1P21675 1872 aa21.91■■□□□ 1.1
APOBEC3A-204ENST00000495988 TRIM28Q13263 835 aaKnown RBP21.9■■□□□ 1.1
APOBEC3A-204ENST00000495988 RTL5Q5HYW3 569 aaPredicted RBP21.9■■□□□ 1.1
APOBEC3A-204ENST00000495988 MPNDQ8N594 471 aa21.9■■□□□ 1.1
APOBEC3A-204ENST00000495988 RTFDC1Q9BY42 306 aaPredicted RBP21.9■■□□□ 1.1
APOBEC3A-204ENST00000495988 ADAMTSL1Q8N6G6 1762 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms