RNA–Protein interactions for RNA: ENST00000494919.1

TMEM17-203, Transcript of transmembrane protein 17, humanhuman

TSL 2

Gene TMEM17, Length 2,460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM17-203ENST00000494919 FUCA2Q9BTY2 467 aa20.41■□□□□ 0.86
TMEM17-203ENST00000494919 MTMR6Q9Y217 621 aa20.41■□□□□ 0.86
TMEM17-203ENST00000494919 KDM3BQ7LBC6 1761 aa20.4■□□□□ 0.86
TMEM17-203ENST00000494919 RGPD5Q99666 1765 aa20.4■□□□□ 0.86
TMEM17-203ENST00000494919 TSC1Q92574 1164 aa20.4■□□□□ 0.86
TMEM17-203ENST00000494919 PDRG1Q9NUG6 133 aa20.4■□□□□ 0.86
TMEM17-203ENST00000494919 KDM4FA0A1W2PPD8 638 aa20.39■□□□□ 0.86
TMEM17-203ENST00000494919 VPS37CA5D8V6 355 aaPredicted RBP20.39■□□□□ 0.85
TMEM17-203ENST00000494919 SPATA31A3Q5VYP0 1347 aa20.39■□□□□ 0.85
TMEM17-203ENST00000494919 TTC41PQ6P2S7 1318 aa20.39■□□□□ 0.85
TMEM17-203ENST00000494919 BTBD11A6QL63 1104 aa20.38■□□□□ 0.85
TMEM17-203ENST00000494919 HSP90AB4PQ58FF6 505 aa20.38■□□□□ 0.85
TMEM17-203ENST00000494919 USP42Q9H9J4 1324 aaKnown RBP20.38■□□□□ 0.85
TMEM17-203ENST00000494919 XIRP1Q702N8 1843 aaKnown RBP20.38■□□□□ 0.85
TMEM17-203ENST00000494919 AP5Z1O43299 807 aa20.38■□□□□ 0.85
TMEM17-203ENST00000494919 ST3GAL1Q11201 340 aa20.38■□□□□ 0.85
TMEM17-203ENST00000494919 VPS53Q5VIR6 699 aa20.38■□□□□ 0.85
TMEM17-203ENST00000494919 KCNQ3O43525 872 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 CHMP4AQ9BY43 222 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 STRCQ7RTU9 1775 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 CLASRPQ8N2M8 674 aaKnown RBP20.37■□□□□ 0.85
TMEM17-203ENST00000494919 NECAB1Q8N987 351 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 RUFY2Q8WXA3 655 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 CYP46A1Q9Y6A2 500 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 COL18A1P39060 1754 aa20.37■□□□□ 0.85
TMEM17-203ENST00000494919 ME3Q16798 604 aa20.36■□□□□ 0.85
TMEM17-203ENST00000494919 CABLES1Q8TDN4 633 aa20.36■□□□□ 0.85
TMEM17-203ENST00000494919 PRIMPOLQ96LW4 560 aa20.36■□□□□ 0.85
TMEM17-203ENST00000494919 ADCY9O60503 1353 aa20.36■□□□□ 0.85
TMEM17-203ENST00000494919 SMAP1Q8IYB5 467 aaPredicted RBP20.36■□□□□ 0.85
TMEM17-203ENST00000494919 ZSWIM6Q9HCJ5 1215 aa20.36■□□□□ 0.85
TMEM17-203ENST00000494919 PA2G4Q9UQ80 394 aaKnown RBP20.36■□□□□ 0.85
TMEM17-203ENST00000494919 BRINP3Q76B58 766 aa20.35■□□□□ 0.85
TMEM17-203ENST00000494919 SH2B1Q9NRF2 756 aaPredicted RBP20.35■□□□□ 0.85
TMEM17-203ENST00000494919 ECHDC1Q9NTX5 307 aa20.35■□□□□ 0.85
TMEM17-203ENST00000494919 SPTLC3Q9NUV7 552 aa20.35■□□□□ 0.85
TMEM17-203ENST00000494919 ABCC6O95255 1503 aa20.35■□□□□ 0.85
TMEM17-203ENST00000494919 ZSCAN31Q96LW9 406 aaPredicted RBP20.34■□□□□ 0.85
TMEM17-203ENST00000494919 NLRP2Q9NX02 1062 aa20.34■□□□□ 0.85
TMEM17-203ENST00000494919 HMGN5P82970 282 aaKnown RBP20.34■□□□□ 0.85
TMEM17-203ENST00000494919 COL9A3Q14050 684 aaPredicted RBP20.34■□□□□ 0.85
TMEM17-203ENST00000494919 RAPGEF4Q8WZA2 1011 aa20.34■□□□□ 0.85
TMEM17-203ENST00000494919 CHMP3Q9Y3E7 222 aa20.34■□□□□ 0.85
TMEM17-203ENST00000494919 ADAMTS7Q9UKP4 1686 aa20.34■□□□□ 0.85
TMEM17-203ENST00000494919 FAM177BA6PVY3 158 aa20.33■□□□□ 0.85
TMEM17-203ENST00000494919 IFIT2P09913 472 aaKnown RBP20.33■□□□□ 0.85
TMEM17-203ENST00000494919 SPC24Q8NBT2 197 aa20.33■□□□□ 0.85
TMEM17-203ENST00000494919 TM6SF1Q9BZW5 370 aa20.33■□□□□ 0.85
TMEM17-203ENST00000494919 KCNF1Q9H3M0 494 aa20.33■□□□□ 0.85
TMEM17-203ENST00000494919 CPDO75976 1380 aa20.33■□□□□ 0.85
TMEM17-203ENST00000494919 CCDC171Q6TFL3 1326 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 NECTIN1Q15223 517 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 FERMT3Q86UX7 667 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 ZNF710Q8N1W2 664 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 TPCN1Q9ULQ1 816 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 HEG1Q9ULI3 1381 aa20.33■□□□□ 0.84
TMEM17-203ENST00000494919 RBM8AQ9Y5S9 174 aaKnown RBP20.32■□□□□ 0.84
TMEM17-203ENST00000494919 ZKSCAN1P17029 563 aaPredicted RBP20.32■□□□□ 0.84
TMEM17-203ENST00000494919 KCNJ4P48050 445 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 MTX1Q13505 466 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 FAM173BQ6P4H8 233 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 KCNB2Q92953 911 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 GPATCH3Q96I76 525 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 FAM227BQ96M60 508 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.32■□□□□ 0.84
TMEM17-203ENST00000494919 C9orf78Q9NZ63 289 aaPredicted RBP20.32■□□□□ 0.84
TMEM17-203ENST00000494919 PYCARDQ9ULZ3 195 aa20.32■□□□□ 0.84
TMEM17-203ENST00000494919 CCDC192P0DO97 292 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 CDC37L1Q7L3B6 337 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 TTC6Q86TZ1 520 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 AACSQ86V21 672 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 PLEKHG2Q9H7P9 1386 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 TATP17735 454 aaPredicted RBP20.31■□□□□ 0.84
TMEM17-203ENST00000494919 GTF2F1P35269 517 aaKnown RBP eCLIP20.31■□□□□ 0.84
TMEM17-203ENST00000494919 CHRNA2Q15822 529 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 LARP1BQ659C4 914 aaKnown RBP20.31■□□□□ 0.84
TMEM17-203ENST00000494919 CREB3L3Q68CJ9 461 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 EVI5LQ96CN4 794 aa20.31■□□□□ 0.84
TMEM17-203ENST00000494919 MAP3K2Q9Y2U5 619 aa20.3■□□□□ 0.84
TMEM17-203ENST00000494919 ZNF335Q9H4Z2 1342 aaPredicted RBP20.3■□□□□ 0.84
TMEM17-203ENST00000494919 CAMK4Q16566 473 aa20.3■□□□□ 0.84
TMEM17-203ENST00000494919 KIAA1524Q8TCG1 905 aa20.3■□□□□ 0.84
TMEM17-203ENST00000494919 TCEANC2Q96MN5 208 aa20.3■□□□□ 0.84
TMEM17-203ENST00000494919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.3■□□□□ 0.84
TMEM17-203ENST00000494919 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
TMEM17-203ENST00000494919 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
TMEM17-203ENST00000494919 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
TMEM17-203ENST00000494919 CWF19L2Q2TBE0 894 aaKnown RBP20.29■□□□□ 0.84
TMEM17-203ENST00000494919 CCDC94Q9BW85 323 aaPredicted RBP20.29■□□□□ 0.84
TMEM17-203ENST00000494919 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
TMEM17-203ENST00000494919 KRT85P78386 507 aa20.29■□□□□ 0.84
TMEM17-203ENST00000494919 NMIQ13287 307 aaPredicted RBP20.29■□□□□ 0.84
TMEM17-203ENST00000494919 PROSER3Q2NL68 480 aa20.29■□□□□ 0.84
TMEM17-203ENST00000494919 MEGF6O75095 1541 aa20.29■□□□□ 0.84
TMEM17-203ENST00000494919 LIG1P18858 919 aa20.28■□□□□ 0.84
TMEM17-203ENST00000494919 KIF3AQ9Y496 699 aa20.28■□□□□ 0.84
TMEM17-203ENST00000494919 SOS2Q07890 1332 aaPredicted RBP20.28■□□□□ 0.84
TMEM17-203ENST00000494919 PHKG2P15735 406 aa20.28■□□□□ 0.84
TMEM17-203ENST00000494919 PODXL2Q9NZ53 605 aa20.28■□□□□ 0.84
TMEM17-203ENST00000494919 ERC1Q8IUD2 1116 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms