RNA–Protein interactions for RNA: ENST00000494891.5

NEPRO-222, Transcript of nucleolus and neural progenitor protein, human

TSL 4

Gene NEPRO, Length 547 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-222	ENST00000494891	RASSF7	Q02833	373 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	TRIM28	Q13263	835 aa	Known RBP	13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	GRIPAP1	Q4V328	841 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	CC2D2B	Q6DHV5	1058 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	ANKRD13D	Q6ZTN6	518 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	NLRP10	Q86W26	655 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	WDR63	Q8IWG1	891 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	UTP14A	Q9BVJ6	771 aa	Known RBP	13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	KDM2B	Q8NHM5	1336 aa		13.32	□□□□□ -0.28
NEPRO-222	ENST00000494891	CACNA1S	Q13698	1873 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	CCDC93	Q567U6	631 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	NUTM1	Q86Y26	1132 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	NECTIN2	Q92692	538 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	CRAMP1	Q96RY5	1269 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	ISCA1	Q9BUE6	129 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	TAOK3	Q9H2K8	898 aa		13.31	□□□□□ -0.28
NEPRO-222	ENST00000494891	TIAM2	Q8IVF5	1701 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	GLTPD2	A6NH11	291 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	FAM177B	A6PVY3	158 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	AIMP1	Q12904	312 aa	Known RBP	13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	CCDC30	Q5VVM6	783 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	RTKN2	Q8IZC4	609 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	C8orf58	Q8NAV2	365 aa		13.3	□□□□□ -0.28
NEPRO-222	ENST00000494891	ZNF526	Q8TF50	670 aa	Predicted RBP	13.29	□□□□□ -0.28
NEPRO-222	ENST00000494891	NLRP3	Q96P20	1036 aa		13.29	□□□□□ -0.28
NEPRO-222	ENST00000494891	PSMD1	Q99460	953 aa		13.29	□□□□□ -0.28
NEPRO-222	ENST00000494891	CACNA1F	O60840	1977 aa		13.29	□□□□□ -0.28
NEPRO-222	ENST00000494891	TOMM70	O94826	608 aa		13.28	□□□□□ -0.28
NEPRO-222	ENST00000494891	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
NEPRO-222	ENST00000494891	RPGR	Q92834	1020 aa	Known RBP	13.28	□□□□□ -0.28
NEPRO-222	ENST00000494891	SH3TC1	Q8TE82	1336 aa		13.28	□□□□□ -0.28
NEPRO-222	ENST00000494891	CEP350	Q5VT06	3117 aa		13.28	□□□□□ -0.28
NEPRO-222	ENST00000494891	WDR90	Q96KV7	1748 aa		13.27	□□□□□ -0.28
NEPRO-222	ENST00000494891	LAMB2	P55268	1798 aa		13.27	□□□□□ -0.28
NEPRO-222	ENST00000494891	TSPYL6	Q8N831	410 aa		13.27	□□□□□ -0.29
NEPRO-222	ENST00000494891	RBM17	Q96I25	401 aa	Known RBP	13.27	□□□□□ -0.29
NEPRO-222	ENST00000494891	NMRK2	Q9NPI5	230 aa		13.27	□□□□□ -0.29
NEPRO-222	ENST00000494891	ELL2	O00472	640 aa	Predicted RBP	13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	GOLGA2	Q08379	1002 aa		13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	C3orf67	Q6ZVT6	689 aa		13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	RBM46	Q8TBY0	533 aa	Known RBP	13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	TSR2	Q969E8	191 aa	Known RBP	13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	TRMT112	Q9UI30	125 aa	Known RBP	13.26	□□□□□ -0.29
NEPRO-222	ENST00000494891	DDX60	Q8IY21	1712 aa	Known RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	ZNF521	Q96K83	1311 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	FANCI	Q9NVI1	1328 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	BBOX1	O75936	387 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	DDX58	O95786	925 aa	Known RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	SF3B3	Q15393	1217 aa	Known RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	TWISTNB	Q3B726	338 aa	Predicted RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	DPY19L2	Q6NUT2	758 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	CCDC191	Q8NCU4	936 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	VPS33B	Q9H267	617 aa		13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	PHAX	Q9H814	394 aa	Known RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.25	□□□□□ -0.29
NEPRO-222	ENST00000494891	ABCC4	O15439	1325 aa		13.24	□□□□□ -0.29
NEPRO-222	ENST00000494891	HSP90B1	P14625	803 aa	Known RBP	13.24	□□□□□ -0.29
NEPRO-222	ENST00000494891	VEGFA	P15692	232 aa	Predicted RBP	13.24	□□□□□ -0.29
NEPRO-222	ENST00000494891	TMC4	Q7Z404	712 aa		13.24	□□□□□ -0.29
NEPRO-222	ENST00000494891	RIC3	Q7Z5B4	369 aa		13.24	□□□□□ -0.29
NEPRO-222	ENST00000494891	PPEF1	O14829	653 aa	Predicted RBP	13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	HSPA6	P17066	643 aa		13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	FSTL1	Q12841	308 aa		13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	KSR2	Q6VAB6	950 aa		13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	METTL22	Q9BUU2	404 aa	Predicted RBP	13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	STK31	Q9BXU1	1019 aa		13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	ATP6V0A2	Q9Y487	856 aa		13.23	□□□□□ -0.29
NEPRO-222	ENST00000494891	LRRC37A	A6NMS7	1700 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	POTEC	B2RU33	542 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	FZD9	O00144	591 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	VAMP4	O75379	141 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	HCLS1	P14317	486 aa	Predicted RBP	13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	IARS	P41252	1262 aa	Known RBP	13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	OLFM4	Q6UX06	510 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	SP8	Q8IXZ3	490 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	FAM9B	Q8IZU0	186 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	SYNE4	Q8N205	404 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	RRAGC	Q9HB90	399 aa		13.22	□□□□□ -0.29
NEPRO-222	ENST00000494891	SCN4A	P35499	1836 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	SENP3-EIF4A1	A0A087X0R7	540 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	ATP5J2-PTCD1	G3V325	749 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	CCER2	I3L3R5	266 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	PCCA	P05165	728 aa	Predicted RBP	13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	GRAP	Q13588	217 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	DDX46	Q7L014	1031 aa	Known RBP	13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	GRAPL	Q8TC17	118 aa	Predicted RBP	13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	FAM89A	Q96GI7	184 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	MYH16	Q9H6N6	1097 aa		13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.21	□□□□□ -0.29
NEPRO-222	ENST00000494891	CDHR2	Q9BYE9	1310 aa		13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	PI4KAP2	A4QPH2	592 aa		13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	IRS4	O14654	1257 aa	Predicted RBP	13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	SLC4A2	P04920	1241 aa		13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	PI4KAP1	Q8N8J0	262 aa		13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.2	□□□□□ -0.3
NEPRO-222	ENST00000494891	CWC25	Q9NXE8	425 aa	Predicted RBP	13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms