RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 LRRFIP2Q9Y608 721 aaKnown RBP19.28■□□□□ 0.68
SHISA5-216ENST00000494854 GYS1P13807 737 aa19.27■□□□□ 0.68
SHISA5-216ENST00000494854 TTC22Q5TAA0 569 aa19.27■□□□□ 0.68
SHISA5-216ENST00000494854 PRAMEF22A3QJZ6 481 aa19.27■□□□□ 0.67
SHISA5-216ENST00000494854 STARD3NLO95772 234 aa19.27■□□□□ 0.67
SHISA5-216ENST00000494854 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.67
SHISA5-216ENST00000494854 BCL11AQ9H165 835 aa19.27■□□□□ 0.67
SHISA5-216ENST00000494854 ADCY9O60503 1353 aa19.27■□□□□ 0.67
SHISA5-216ENST00000494854 PNMA6EA0A0J9YXQ4 647 aa19.26■□□□□ 0.67
SHISA5-216ENST00000494854 BEND3Q5T5X7 828 aa19.26■□□□□ 0.67
SHISA5-216ENST00000494854 TBC1D9Q6ZT07 1266 aa19.26■□□□□ 0.67
SHISA5-216ENST00000494854 NLGN2Q8NFZ4 835 aa19.26■□□□□ 0.67
SHISA5-216ENST00000494854 OTUD7AQ8TE49 926 aaPredicted RBP19.26■□□□□ 0.67
SHISA5-216ENST00000494854 USP42Q9H9J4 1324 aaKnown RBP19.25■□□□□ 0.67
SHISA5-216ENST00000494854 CDC45O75419 566 aa19.25■□□□□ 0.67
SHISA5-216ENST00000494854 MMP10P09238 476 aa19.25■□□□□ 0.67
SHISA5-216ENST00000494854 EXOC6BQ9Y2D4 811 aa19.25■□□□□ 0.67
SHISA5-216ENST00000494854 PROSER3Q2NL68 480 aa19.24■□□□□ 0.67
SHISA5-216ENST00000494854 HYPKQ9NX55 129 aa19.24■□□□□ 0.67
SHISA5-216ENST00000494854 RBM25P49756 843 aaKnown RBP19.23■□□□□ 0.67
SHISA5-216ENST00000494854 ZBTB1Q9Y2K1 713 aa19.23■□□□□ 0.67
SHISA5-216ENST00000494854 IBTKQ9P2D0 1353 aaPredicted RBP19.22■□□□□ 0.67
SHISA5-216ENST00000494854 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
SHISA5-216ENST00000494854 DDX21Q9NR30 783 aaKnown RBP eCLIP19.22■□□□□ 0.67
SHISA5-216ENST00000494854 GPR162Q16538 588 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 RTL5Q5HYW3 569 aaPredicted RBP19.21■□□□□ 0.67
SHISA5-216ENST00000494854 KSR2Q6VAB6 950 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 SSH3Q8TE77 659 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 TBC1D2Q9BYX2 928 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 SRP68Q9UHB9 627 aaKnown RBP19.21■□□□□ 0.67
SHISA5-216ENST00000494854 NARFQ9UHQ1 456 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 ZPR1O75312 459 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 NBPF7P0C2Y1 421 aaPredicted RBP19.21■□□□□ 0.67
SHISA5-216ENST00000494854 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
SHISA5-216ENST00000494854 OSBPL3Q9H4L5 887 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 MAP3K2Q9Y2U5 619 aa19.21■□□□□ 0.67
SHISA5-216ENST00000494854 COL15A1P39059 1388 aa19.21■□□□□ 0.66
SHISA5-216ENST00000494854 CHD4Q14839 1912 aa19.2■□□□□ 0.66
SHISA5-216ENST00000494854 EIF5BO60841 1220 aaKnown RBP19.19■□□□□ 0.66
SHISA5-216ENST00000494854 PDIA6Q15084 440 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 PARP3Q9Y6F1 533 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 A0A087WZG4 1122 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 SNRPA1P09661 255 aaKnown RBP19.19■□□□□ 0.66
SHISA5-216ENST00000494854 IL6STP40189 918 aaPredicted RBP19.19■□□□□ 0.66
SHISA5-216ENST00000494854 PDE1AP54750 535 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 LAMB4A4D0S4 1761 aa19.19■□□□□ 0.66
SHISA5-216ENST00000494854 DDX58O95786 925 aaKnown RBP19.18■□□□□ 0.66
SHISA5-216ENST00000494854 SDSP20132 328 aa19.18■□□□□ 0.66
SHISA5-216ENST00000494854 YY1P25490 414 aa19.18■□□□□ 0.66
SHISA5-216ENST00000494854 TM4SF1P30408 202 aa19.18■□□□□ 0.66
SHISA5-216ENST00000494854 POLA2Q14181 598 aa19.18■□□□□ 0.66
SHISA5-216ENST00000494854 SALL3Q9BXA9 1300 aa19.18■□□□□ 0.66
SHISA5-216ENST00000494854 USPL1Q5W0Q7 1092 aa19.17■□□□□ 0.66
SHISA5-216ENST00000494854 GRIN3BO60391 1043 aa19.17■□□□□ 0.66
SHISA5-216ENST00000494854 USP16Q9Y5T5 823 aa19.17■□□□□ 0.66
SHISA5-216ENST00000494854 UTRNP46939 3433 aa19.17■□□□□ 0.66
SHISA5-216ENST00000494854 TGFB2P61812 414 aa19.16■□□□□ 0.66
SHISA5-216ENST00000494854 C10orf71Q711Q0 1435 aa19.16■□□□□ 0.66
SHISA5-216ENST00000494854 SRGAP3O43295 1099 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 A1BGP04217 495 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 AIMP1Q12904 312 aaKnown RBP19.15■□□□□ 0.66
SHISA5-216ENST00000494854 BCL2L12Q9HB09 334 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 RAB11FIP3O75154 756 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 YBX3P16989 372 aaKnown RBP eCLIP19.15■□□□□ 0.666e-10■□□□□ 9.8
SHISA5-216ENST00000494854 DDR1Q08345 913 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 LINS1Q8NG48 757 aa19.15■□□□□ 0.66
SHISA5-216ENST00000494854 C9orf78Q9NZ63 289 aaPredicted RBP19.15■□□□□ 0.66
SHISA5-216ENST00000494854 MX1P20591 662 aa19.14■□□□□ 0.65
SHISA5-216ENST00000494854 CASC1Q6TDU7 716 aa19.14■□□□□ 0.65
SHISA5-216ENST00000494854 POLRMTO00411 1230 aaKnown RBP19.13■□□□□ 0.65
SHISA5-216ENST00000494854 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
SHISA5-216ENST00000494854 MYL6BP14649 208 aa19.13■□□□□ 0.65
SHISA5-216ENST00000494854 NFKBIBQ15653 356 aa19.13■□□□□ 0.65
SHISA5-216ENST00000494854 CWF19L2Q2TBE0 894 aaKnown RBP19.13■□□□□ 0.65
SHISA5-216ENST00000494854 HDAC5Q9UQL6 1122 aa19.13■□□□□ 0.65
SHISA5-216ENST00000494854 SLKQ9H2G2 1235 aaPredicted RBP19.13■□□□□ 0.65
SHISA5-216ENST00000494854 KIAA1551Q9HCM1 1747 aa19.13■□□□□ 0.65
SHISA5-216ENST00000494854 MTX1Q13505 466 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 NFIXQ14938 502 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 RIC3Q7Z5B4 369 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 HSCBQ8IWL3 235 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 KIF2CQ99661 725 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 GOLGB1Q14789 3259 aaKnown RBP19.12■□□□□ 0.65
SHISA5-216ENST00000494854 XAGE3Q8WTP9 111 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 STAP2Q9UGK3 403 aa19.12■□□□□ 0.65
SHISA5-216ENST00000494854 AFDNP55196 1824 aaKnown RBP19.11■□□□□ 0.65
SHISA5-216ENST00000494854 AK9Q5TCS8 1911 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 COPS6Q7L5N1 327 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 SNX21Q969T3 373 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 ANTXR1Q9H6X2 564 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 UTYO14607 1347 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 ARFGEF2Q9Y6D5 1785 aa19.11■□□□□ 0.65
SHISA5-216ENST00000494854 NRXN2Q9P2S2 1712 aa19.1■□□□□ 0.65
SHISA5-216ENST00000494854 GRM8O00222 908 aa19.1■□□□□ 0.65
SHISA5-216ENST00000494854 TSHZ3Q63HK5 1081 aa19.1■□□□□ 0.65
SHISA5-216ENST00000494854 LRP10Q7Z4F1 713 aa19.1■□□□□ 0.65
SHISA5-216ENST00000494854 RHPN1Q8TCX5 695 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms