RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 NFIXQ14938 502 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 TWISTNBQ3B726 338 aaPredicted RBP6.95□□□□□ -1.3
SRPRB-205ENST00000494297 HDGFL1Q5TGJ6 251 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 CCDC30Q5VVM6 783 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 TSPYL6Q8N831 410 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 SYT17Q9BSW7 474 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 PPP1R1BQ9UD71 204 aaPredicted RBP6.95□□□□□ -1.3
SRPRB-205ENST00000494297 CD2APQ9Y5K6 639 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 FANCIQ9NVI1 1328 aa6.95□□□□□ -1.3
SRPRB-205ENST00000494297 POLRMTO00411 1230 aaKnown RBP6.94□□□□□ -1.3
SRPRB-205ENST00000494297 EXOSC9Q06265 439 aaKnown RBP6.94□□□□□ -1.3
SRPRB-205ENST00000494297 PROSER3Q2NL68 480 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 TBC1D9BQ66K14 1250 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 TTLL7Q6ZT98 887 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 COPS6Q7L5N1 327 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 NECTIN2Q92692 538 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 FHDC1Q9C0D6 1143 aaPredicted RBP6.94□□□□□ -1.3
SRPRB-205ENST00000494297 HYPKQ9NX55 129 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 CHPF2Q9P2E5 772 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 ZNF330Q9Y3S2 320 aaPredicted RBP6.94□□□□□ -1.3
SRPRB-205ENST00000494297 PARP3Q9Y6F1 533 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 MAP3K15Q6ZN16 1313 aa6.94□□□□□ -1.3
SRPRB-205ENST00000494297 SERPINB2P05120 415 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 TGFB2P61812 414 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 DDR1Q08345 913 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 HLFQ16534 295 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 GIGYF2Q6Y7W6 1299 aaKnown RBP6.93□□□□□ -1.3
SRPRB-205ENST00000494297 KIF6Q6ZMV9 814 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 IFNLR1Q8IU57 520 aaPredicted RBP6.93□□□□□ -1.3
SRPRB-205ENST00000494297 PLBD2Q8NHP8 589 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 SETDB2Q96T68 719 aa6.93□□□□□ -1.3
SRPRB-205ENST00000494297 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.93□□□□□ -1.3
SRPRB-205ENST00000494297 LAMB4A4D0S4 1761 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 ANXA1P04083 346 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 ANKRD13DQ6ZTN6 518 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 C3orf67Q6ZVT6 689 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 ZNF34Q8IZ26 560 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 XAGE3Q8WTP9 111 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 ZNF428Q96B54 188 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 CDCA7LQ96GN5 454 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 C4AP0C0L4 1744 aa6.92□□□□□ -1.3
SRPRB-205ENST00000494297 CT47B1P0C2W7 299 aaPredicted RBP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 HNRNPUQ00839 825 aaKnown RBP eCLIP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 AIMP1Q12904 312 aaKnown RBP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 TCIRG1Q13488 830 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 HSP90AB3PQ58FF7 597 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 TPTE2Q6XPS3 522 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 BICDL1Q6ZP65 573 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 TMEM121BQ9BXQ6 578 aaPredicted RBP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 STK31Q9BXU1 1019 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 ZBTB3Q9H5J0 574 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 PHAXQ9H814 394 aaKnown RBP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 NIP7Q9Y221 180 aaKnown RBP eCLIP6.91□□□□□ -1.3
SRPRB-205ENST00000494297 CARMIL3Q8ND23 1372 aa6.91□□□□□ -1.3
SRPRB-205ENST00000494297 DDX58O95786 925 aaKnown RBP6.9□□□□□ -1.3
SRPRB-205ENST00000494297 KCNA3P22001 575 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 TRIM28Q13263 835 aaKnown RBP6.9□□□□□ -1.3
SRPRB-205ENST00000494297 PARP10Q53GL7 1025 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 SUSD4Q5VX71 490 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 PRR5LQ6MZQ0 368 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 PPP1R42Q7Z4L9 355 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 NLGN2Q8NFZ4 835 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 BRIP1Q9BX63 1249 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 NYXQ9GZU5 481 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 PDZRN3Q9UPQ7 1066 aa6.9□□□□□ -1.3
SRPRB-205ENST00000494297 C10orf71Q711Q0 1435 aa6.9□□□□□ -1.31
SRPRB-205ENST00000494297 ATP10DQ9P241 1426 aa6.9□□□□□ -1.31
SRPRB-205ENST00000494297 KLRG2A4D1S0 409 aaPredicted RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 G3V3G9 751 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 PDE6BP35913 854 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 BRPF1P55201 1214 aaPredicted RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 PDAP1Q13442 181 aaKnown RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 ALDH1L2Q3SY69 923 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 SLC10A5Q5PT55 438 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 KSR2Q6VAB6 950 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 G2E3Q7L622 706 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 RIC3Q7Z5B4 369 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 NBPF5PQ86XG9 351 aaPredicted RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 METTL22Q9BUU2 404 aaPredicted RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 ZBED9Q6R2W3 1325 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 UBN2Q6ZU65 1347 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 IBTKQ9P2D0 1353 aaPredicted RBP6.89□□□□□ -1.31
SRPRB-205ENST00000494297 SCN7AQ01118 1682 aa6.89□□□□□ -1.31
SRPRB-205ENST00000494297 BCORQ6W2J9 1755 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 NRXN2Q9P2S2 1712 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 RNF123Q5XPI4 1314 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 A0A0G2JLW4 131 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 PI4KAP2A4QPH2 592 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 TCERG1O14776 1098 aaKnown RBP6.88□□□□□ -1.31
SRPRB-205ENST00000494297 NTSR2O95665 410 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 CHRM1P11229 460 aaPredicted RBP6.88□□□□□ -1.31
SRPRB-205ENST00000494297 DPEP1P16444 411 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 ST5P78524 1137 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 FLIIQ13045 1269 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 NLRP10Q86W26 655 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 MRPL50Q8N5N7 158 aaKnown RBP6.88□□□□□ -1.31
SRPRB-205ENST00000494297 PI4KAP1Q8N8J0 262 aa6.88□□□□□ -1.31
SRPRB-205ENST00000494297 CNBD1Q8NA66 436 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms