RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 ZNF316A6NFI3 1004 aaPredicted RBP12.71□□□□□ -0.37
UFD1-210ENST00000494054 VEGFAP15692 232 aaPredicted RBP12.71□□□□□ -0.37
UFD1-210ENST00000494054 SLC10A5Q5PT55 438 aa12.71□□□□□ -0.37
UFD1-210ENST00000494054 HDGFL1Q5TGJ6 251 aa12.71□□□□□ -0.37
UFD1-210ENST00000494054 DUSP27Q5VZP5 1158 aa12.71□□□□□ -0.37
UFD1-210ENST00000494054 PPP1R42Q7Z4L9 355 aa12.71□□□□□ -0.37
UFD1-210ENST00000494054 NLRP10Q86W26 655 aa12.71□□□□□ -0.37
UFD1-210ENST00000494054 UTP14AQ9BVJ6 771 aaKnown RBP12.71□□□□□ -0.37
UFD1-210ENST00000494054 DICER1Q9UPY3 1922 aaKnown RBP12.7□□□□□ -0.38
UFD1-210ENST00000494054 HOXB7P09629 217 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 FKBP4Q02790 459 aaKnown RBP eCLIP12.7□□□□□ -0.38
UFD1-210ENST00000494054 TCIRG1Q13488 830 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 DPY19L2Q6NUT2 758 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 SYNE4Q8N205 404 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 ZNF277Q9NRM2 450 aaPredicted RBP12.7□□□□□ -0.38
UFD1-210ENST00000494054 IFT57Q9NWB7 429 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 SNED1Q8TER0 1413 aa12.7□□□□□ -0.38
UFD1-210ENST00000494054 ELL2O00472 640 aaPredicted RBP12.69□□□□□ -0.38
UFD1-210ENST00000494054 DDNO94850 711 aaPredicted RBP12.69□□□□□ -0.38
UFD1-210ENST00000494054 GNAI1P63096 354 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 FSTL1Q12841 308 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 HSP90AB3PQ58FF7 597 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 RPGRQ92834 1020 aaKnown RBP12.69□□□□□ -0.38
UFD1-210ENST00000494054 ZNF428Q96B54 188 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 CRAMP1Q96RY5 1269 aa12.69□□□□□ -0.38
UFD1-210ENST00000494054 DBF4Q9UBU7 674 aaPredicted RBP12.69□□□□□ -0.38
UFD1-210ENST00000494054 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
UFD1-210ENST00000494054 HCLS1P14317 486 aaPredicted RBP12.68□□□□□ -0.38
UFD1-210ENST00000494054 APLP1P51693 650 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 HTRA3P83110 453 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
UFD1-210ENST00000494054 NLRP3Q96P20 1036 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 WDR90Q96KV7 1748 aa12.68□□□□□ -0.38
UFD1-210ENST00000494054 CALD1Q05682 793 aaKnown RBP12.67□□□□□ -0.38
UFD1-210ENST00000494054 DNAJC5GQ8N7S2 189 aa12.67□□□□□ -0.38
UFD1-210ENST00000494054 C8orf58Q8NAV2 365 aa12.67□□□□□ -0.38
UFD1-210ENST00000494054 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
UFD1-210ENST00000494054 HYPKQ9NX55 129 aa12.67□□□□□ -0.38
UFD1-210ENST00000494054 TRMT112Q9UI30 125 aaKnown RBP12.67□□□□□ -0.38
UFD1-210ENST00000494054 ANKRD36CQ5JPF3 1778 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 ZNF541Q9H0D2 1346 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 ATP5J2-PTCD1G3V325 749 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 PPEF1O14829 653 aaPredicted RBP12.66□□□□□ -0.38
UFD1-210ENST00000494054 IARSP41252 1262 aaKnown RBP12.66□□□□□ -0.38
UFD1-210ENST00000494054 CC2D2BQ6DHV5 1058 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 PSMD1Q99460 953 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 ISCA1Q9BUE6 129 aa12.66□□□□□ -0.38
UFD1-210ENST00000494054 PHAXQ9H814 394 aaKnown RBP12.66□□□□□ -0.38
UFD1-210ENST00000494054 RNF123Q5XPI4 1314 aa12.65□□□□□ -0.38
UFD1-210ENST00000494054 SH3TC1Q8TE82 1336 aa12.65□□□□□ -0.38
UFD1-210ENST00000494054 POTEIP0CG38 1075 aa12.65□□□□□ -0.38
UFD1-210ENST00000494054 POTEJP0CG39 1038 aa12.65□□□□□ -0.38
UFD1-210ENST00000494054 MRS2Q9HD23 443 aa12.65□□□□□ -0.38
UFD1-210ENST00000494054 ABCC4O15439 1325 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 COL4A5P29400 1685 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 FZD9O00144 591 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 ANP32CO43423 234 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 WWC1Q8IX03 1113 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 TSPYL6Q8N831 410 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 TSR2Q969E8 191 aaKnown RBP12.64□□□□□ -0.39
UFD1-210ENST00000494054 FAM89AQ96GI7 184 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 ATP6V0A2Q9Y487 856 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 CEP350Q5VT06 3117 aa12.64□□□□□ -0.39
UFD1-210ENST00000494054 CCDC27Q2M243 656 aa12.63□□□□□ -0.39
UFD1-210ENST00000494054 L3MBTL3Q96JM7 780 aaPredicted RBP12.63□□□□□ -0.39
UFD1-210ENST00000494054 LAMB2P55268 1798 aa12.63□□□□□ -0.39
UFD1-210ENST00000494054 BBOX1O75936 387 aa12.62□□□□□ -0.39
UFD1-210ENST00000494054 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
UFD1-210ENST00000494054 GRIPAP1Q4V328 841 aa12.62□□□□□ -0.39
UFD1-210ENST00000494054 RTL5Q5HYW3 569 aaPredicted RBP12.62□□□□□ -0.39
UFD1-210ENST00000494054 RIC3Q7Z5B4 369 aa12.62□□□□□ -0.39
UFD1-210ENST00000494054 JDP2Q8WYK2 163 aa12.62□□□□□ -0.39
UFD1-210ENST00000494054 GOLGA2Q08379 1002 aa12.61□□□□□ -0.39
UFD1-210ENST00000494054 GRAPQ13588 217 aa12.61□□□□□ -0.39
UFD1-210ENST00000494054 CHADLQ6NUI6 762 aa12.61□□□□□ -0.39
UFD1-210ENST00000494054 DDX46Q7L014 1031 aaKnown RBP12.61□□□□□ -0.39
UFD1-210ENST00000494054 SP8Q8IXZ3 490 aa12.61□□□□□ -0.39
UFD1-210ENST00000494054 LARGE2Q8N3Y3 721 aa12.61□□□□□ -0.39
UFD1-210ENST00000494054 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
UFD1-210ENST00000494054 TAF1DQ9H5J8 278 aaPredicted RBP12.61□□□□□ -0.39
UFD1-210ENST00000494054 DDX60Q8IY21 1712 aaKnown RBP12.6□□□□□ -0.39
UFD1-210ENST00000494054 TAF1P21675 1872 aa12.6□□□□□ -0.39
UFD1-210ENST00000494054 IQCA1LA6NCM1 817 aa12.6□□□□□ -0.39
UFD1-210ENST00000494054 SF3B3Q15393 1217 aaKnown RBP12.6□□□□□ -0.39
UFD1-210ENST00000494054 CCDC30Q5VVM6 783 aa12.6□□□□□ -0.39
UFD1-210ENST00000494054 GPC2Q8N158 579 aa12.6□□□□□ -0.39
UFD1-210ENST00000494054 MYD88Q99836 296 aa12.6□□□□□ -0.39
UFD1-210ENST00000494054 SALL2Q9Y467 1007 aaPredicted RBP12.6□□□□□ -0.39
UFD1-210ENST00000494054 COL4A1P02462 1669 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 IRS4O14654 1257 aaPredicted RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 PPIP5K2O43314 1243 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 EIF6P56537 245 aaKnown RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 AOC3Q16853 763 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 MPNDQ8N594 471 aa12.59□□□□□ -0.39
UFD1-210ENST00000494054 JARID2Q92833 1246 aaPredicted RBP12.59□□□□□ -0.39
UFD1-210ENST00000494054 CELF1Q92879 486 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms