RNA–Protein interactions for RNA: ENST00000493510.1

KPNA1-209, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-209ENST00000493510 C4AP0C0L4 1744 aa9.77□□□□□ -0.85
KPNA1-209ENST00000493510 A0A1W2PPC1 479 aa9.77□□□□□ -0.85
KPNA1-209ENST00000493510 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.859e-6■□□□□ 9.4
KPNA1-209ENST00000493510 TTLL6Q8N841 843 aa9.77□□□□□ -0.85
KPNA1-209ENST00000493510 LRCH3Q96II8 777 aa9.77□□□□□ -0.85
KPNA1-209ENST00000493510 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
KPNA1-209ENST00000493510 SCN4AP35499 1836 aa9.77□□□□□ -0.85
KPNA1-209ENST00000493510 ADAMTSL1Q8N6G6 1762 aa9.76□□□□□ -0.85
KPNA1-209ENST00000493510 TRAPPC3LQ5T215 181 aa9.76□□□□□ -0.85
KPNA1-209ENST00000493510 GIGYF2Q6Y7W6 1299 aaKnown RBP9.76□□□□□ -0.85
KPNA1-209ENST00000493510 KCNH5Q8NCM2 988 aa9.76□□□□□ -0.85
KPNA1-209ENST00000493510 FBXW7Q969H0 707 aa9.76□□□□□ -0.85
KPNA1-209ENST00000493510 PIK3C2GO75747 1445 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 CEP290O15078 2479 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 UBR3Q6ZT12 1888 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 SOX1O00570 391 aaPredicted RBP9.75□□□□□ -0.85
KPNA1-209ENST00000493510 SMARCC1Q92922 1105 aaPredicted RBP9.75□□□□□ -0.85
KPNA1-209ENST00000493510 ZIC5Q96T25 663 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 REPIN1Q9BWE0 567 aaKnown RBP9.75□□□□□ -0.85
KPNA1-209ENST00000493510 INSRP06213 1382 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 PIEZO1Q92508 2521 aa9.75□□□□□ -0.85
KPNA1-209ENST00000493510 MS4A1P11836 297 aa9.74□□□□□ -0.85
KPNA1-209ENST00000493510 GYS1P13807 737 aa9.74□□□□□ -0.85
KPNA1-209ENST00000493510 C14orf93Q9H972 538 aaKnown RBP9.74□□□□□ -0.85
KPNA1-209ENST00000493510 TRAF5O00463 557 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 CELF2O95319 508 aaKnown RBP9.73□□□□□ -0.85
KPNA1-209ENST00000493510 CLCN1P35523 988 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 ZMYND15Q9H091 742 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 PRO3102Q9H379 93 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 LTBP3Q9NS15 1303 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 DOT1LQ8TEK3 1739 aa9.73□□□□□ -0.85
KPNA1-209ENST00000493510 TNFRSF10AO00220 468 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 EN2P19622 333 aaPredicted RBP9.72□□□□□ -0.85
KPNA1-209ENST00000493510 FOSBP53539 338 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 KANK4Q5T7N3 995 aaPredicted RBP9.72□□□□□ -0.85
KPNA1-209ENST00000493510 LINC00116Q8NCU8 138 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 TMUB1Q9BVT8 246 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 GOPCQ9HD26 462 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 RTCBQ9Y3I0 505 aaKnown RBP9.72□□□□□ -0.85
KPNA1-209ENST00000493510 TTC28Q96AY4 2481 aa9.72□□□□□ -0.85
KPNA1-209ENST00000493510 TAF1LQ8IZX4 1826 aa9.71□□□□□ -0.85
KPNA1-209ENST00000493510 MDM2Q00987 491 aaPredicted RBP9.71□□□□□ -0.86
KPNA1-209ENST00000493510 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 BICDL1Q6ZP65 573 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 SYNE4Q8N205 404 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 P2RX7Q99572 595 aaKnown RBP9.71□□□□□ -0.86
KPNA1-209ENST00000493510 TAOK3Q9H2K8 898 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 MTMR10Q9NXD2 777 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 RNF123Q5XPI4 1314 aa9.71□□□□□ -0.86
KPNA1-209ENST00000493510 BRCA2P51587 3418 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 PKD1L2Q7Z442 2459 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 RFC4P35249 363 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 KIF23Q02241 960 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-209ENST00000493510 ZNF454Q8N9F8 522 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 ZNF296Q8WUU4 475 aaPredicted RBP9.7□□□□□ -0.86
KPNA1-209ENST00000493510 ZDHHC16Q969W1 377 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 GPCPD1Q9NPB8 672 aa9.7□□□□□ -0.86
KPNA1-209ENST00000493510 OATP04181 439 aa9.69□□□□□ -0.86
KPNA1-209ENST00000493510 NUDT7P0C024 238 aa9.69□□□□□ -0.86
KPNA1-209ENST00000493510 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
KPNA1-209ENST00000493510 ARSIQ5FYB1 569 aa9.69□□□□□ -0.86
KPNA1-209ENST00000493510 KHSRPQ92945 711 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■□□□ 13.5
KPNA1-209ENST00000493510 COL26A1Q96A83 441 aa9.69□□□□□ -0.86
KPNA1-209ENST00000493510 SSTR3P32745 418 aaPredicted RBP9.68□□□□□ -0.86
KPNA1-209ENST00000493510 RGL3Q3MIN7 710 aa9.68□□□□□ -0.86
KPNA1-209ENST00000493510 LHX8Q68G74 356 aa9.68□□□□□ -0.86
KPNA1-209ENST00000493510 MPRIPQ6WCQ1 1025 aa9.68□□□□□ -0.86
KPNA1-209ENST00000493510 Q7L0L9 218 aa9.68□□□□□ -0.86
KPNA1-209ENST00000493510 ALYREFQ86V81 257 aaKnown RBP9.68□□□□□ -0.86
KPNA1-209ENST00000493510 ZCRB1Q8TBF4 217 aaKnown RBP9.68□□□□□ -0.86
KPNA1-209ENST00000493510 PCMTD1Q96MG8 357 aaPredicted RBP9.68□□□□□ -0.86
KPNA1-209ENST00000493510 LOC102724428A0A0B4J2F2 783 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 SIK1P57059 783 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 CFAP70Q5T0N1 1121 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 PADI6Q6TGC4 694 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 TRAK1Q9UPV9 953 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 HCN4Q9Y3Q4 1203 aa9.67□□□□□ -0.86
KPNA1-209ENST00000493510 CCDC88AQ3V6T2 1871 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 C21orf2O43822 256 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 LMOD1P29536 600 aaPredicted RBP9.66□□□□□ -0.86
KPNA1-209ENST00000493510 HUNKP57058 714 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 DDR1Q08345 913 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 METTL3Q86U44 580 aaKnown RBP9.66□□□□□ -0.86
KPNA1-209ENST00000493510 ANKRD24Q8TF21 1146 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 DPF3Q92784 378 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 LAMA3Q16787 3333 aa9.66□□□□□ -0.86
KPNA1-209ENST00000493510 RPTORQ8N122 1335 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 ZNF541Q9H0D2 1346 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 FAM155AB1AL88 458 aaPredicted RBP9.65□□□□□ -0.86
KPNA1-209ENST00000493510 H0YIN7 160 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 RIMBP2O15034 1052 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
KPNA1-209ENST00000493510 RGMBQ6NW40 437 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 CDK19Q9BWU1 502 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 ADAM33Q9BZ11 813 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 ZNF408Q9H9D4 720 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 ADGRG1Q9Y653 693 aa9.65□□□□□ -0.86
KPNA1-209ENST00000493510 SMG6Q86US8 1419 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 573.5 ms