RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 HOXA10P31260 410 aaPredicted RBP28.96■■■□□ 2.23
LYSMD4-208ENST00000493256 PPP1R42Q7Z4L9 355 aa28.96■■■□□ 2.23
LYSMD4-208ENST00000493256 RPGRQ92834 1020 aaKnown RBP28.96■■■□□ 2.23
LYSMD4-208ENST00000493256 COPS6Q7L5N1 327 aa28.95■■■□□ 2.22
LYSMD4-208ENST00000493256 AIMP1Q12904 312 aaKnown RBP28.94■■■□□ 2.22
LYSMD4-208ENST00000493256 C3orf67Q6ZVT6 689 aa28.94■■■□□ 2.22
LYSMD4-208ENST00000493256 XAGE3Q8WTP9 111 aa28.94■■■□□ 2.22
LYSMD4-208ENST00000493256 SYNE4Q8N205 404 aa28.93■■■□□ 2.22
LYSMD4-208ENST00000493256 DDX21Q9NR30 783 aaKnown RBP eCLIP28.93■■■□□ 2.22
LYSMD4-208ENST00000493256 ANKRD36CQ5JPF3 1778 aa28.93■■■□□ 2.22
LYSMD4-208ENST00000493256 UTP14AQ9BVJ6 771 aaKnown RBP28.92■■■□□ 2.22
LYSMD4-208ENST00000493256 IARSP41252 1262 aaKnown RBP28.91■■■□□ 2.22
LYSMD4-208ENST00000493256 CRAMP1Q96RY5 1269 aa28.91■■■□□ 2.22
LYSMD4-208ENST00000493256 ZNF541Q9H0D2 1346 aa28.91■■■□□ 2.22
LYSMD4-208ENST00000493256 CC2D2BQ6DHV5 1058 aa28.9■■■□□ 2.22
LYSMD4-208ENST00000493256 KLRG1Q96E93 195 aa28.9■■■□□ 2.22
LYSMD4-208ENST00000493256 RBM17Q96I25 401 aaKnown RBP28.9■■■□□ 2.22
LYSMD4-208ENST00000493256 PSMD1Q99460 953 aa28.9■■■□□ 2.22
LYSMD4-208ENST00000493256 CHPF2Q9P2E5 772 aa28.9■■■□□ 2.22
LYSMD4-208ENST00000493256 HSP90AB3PQ58FF7 597 aa28.89■■■□□ 2.22
LYSMD4-208ENST00000493256 SLC51AQ86UW1 340 aa28.89■■■□□ 2.22
LYSMD4-208ENST00000493256 L3MBTL3Q96JM7 780 aaPredicted RBP28.89■■■□□ 2.22
LYSMD4-208ENST00000493256 CFAP44Q96MT7 982 aa28.89■■■□□ 2.22
LYSMD4-208ENST00000493256 HOXB7P09629 217 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 POTEIP0CG38 1075 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 POTEJP0CG39 1038 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 SLC10A5Q5PT55 438 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 HDGFL1Q5TGJ6 251 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 NLRP10Q86W26 655 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 NLRP3Q96P20 1036 aa28.88■■■□□ 2.21
LYSMD4-208ENST00000493256 PPEF1O14829 653 aaPredicted RBP28.87■■■□□ 2.21
LYSMD4-208ENST00000493256 RNF123Q5XPI4 1314 aa28.87■■■□□ 2.21
LYSMD4-208ENST00000493256 SCN4AP35499 1836 aa28.87■■■□□ 2.21
LYSMD4-208ENST00000493256 IQCA1LA6NCM1 817 aa28.86■■■□□ 2.21
LYSMD4-208ENST00000493256 APAF1O14727 1248 aa28.86■■■□□ 2.21
LYSMD4-208ENST00000493256 TCIRG1Q13488 830 aa28.86■■■□□ 2.21
LYSMD4-208ENST00000493256 MBIPQ9NS73 344 aa28.86■■■□□ 2.21
LYSMD4-208ENST00000493256 FZD9O00144 591 aa28.85■■■□□ 2.21
LYSMD4-208ENST00000493256 TCERG1O14776 1098 aaKnown RBP28.85■■■□□ 2.21
LYSMD4-208ENST00000493256 CHADLQ6NUI6 762 aa28.85■■■□□ 2.21
LYSMD4-208ENST00000493256 COL4A5P29400 1685 aa28.84■■■□□ 2.21
LYSMD4-208ENST00000493256 LAMB2P55268 1798 aa28.84■■■□□ 2.21
LYSMD4-208ENST00000493256 DUSP27Q5VZP5 1158 aa28.84■■■□□ 2.21
LYSMD4-208ENST00000493256 TAF1DQ9H5J8 278 aaPredicted RBP28.84■■■□□ 2.21
LYSMD4-208ENST00000493256 ZNF853P0CG23 659 aa28.83■■■□□ 2.21
LYSMD4-208ENST00000493256 GRIPAP1Q4V328 841 aa28.83■■■□□ 2.21
LYSMD4-208ENST00000493256 JMYQ8N9B5 988 aa28.83■■■□□ 2.21
LYSMD4-208ENST00000493256 HCLS1P14317 486 aaPredicted RBP28.82■■■□□ 2.2
LYSMD4-208ENST00000493256 JDP2Q8WYK2 163 aa28.82■■■□□ 2.2
LYSMD4-208ENST00000493256 DBF4Q9UBU7 674 aaPredicted RBP28.82■■■□□ 2.2
LYSMD4-208ENST00000493256 TRMT112Q9UI30 125 aaKnown RBP28.82■■■□□ 2.2
LYSMD4-208ENST00000493256 ABCC4O15439 1325 aa28.82■■■□□ 2.2
LYSMD4-208ENST00000493256 PLBD2Q8NHP8 589 aa28.81■■■□□ 2.2
LYSMD4-208ENST00000493256 SH3TC1Q8TE82 1336 aa28.8■■■□□ 2.2
LYSMD4-208ENST00000493256 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
LYSMD4-208ENST00000493256 ANKRD13DQ6ZTN6 518 aa28.79■■■□□ 2.2
LYSMD4-208ENST00000493256 LDHDQ86WU2 507 aa28.79■■■□□ 2.2
LYSMD4-208ENST00000493256 ZNF428Q96B54 188 aa28.79■■■□□ 2.2
LYSMD4-208ENST00000493256 HACL1Q9UJ83 578 aa28.79■■■□□ 2.2
LYSMD4-208ENST00000493256 ATP6V0A2Q9Y487 856 aa28.79■■■□□ 2.2
LYSMD4-208ENST00000493256 GPC2Q8N158 579 aa28.78■■■□□ 2.2
LYSMD4-208ENST00000493256 LARGE2Q8N3Y3 721 aa28.78■■■□□ 2.2
LYSMD4-208ENST00000493256 HYPKQ9NX55 129 aa28.78■■■□□ 2.2
LYSMD4-208ENST00000493256 CALD1Q05682 793 aaKnown RBP28.77■■■□□ 2.2
LYSMD4-208ENST00000493256 EPHX2P34913 555 aa28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 GNAI1P63096 354 aa28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 EAPPQ56P03 285 aaPredicted RBP28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 IFFO2Q5TF58 517 aa28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 ISCA1Q9BUE6 129 aa28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 TMX4Q9H1E5 349 aaPredicted RBP28.76■■■□□ 2.19
LYSMD4-208ENST00000493256 EIF6P56537 245 aaKnown RBP28.75■■■□□ 2.19
LYSMD4-208ENST00000493256 CCDC184Q52MB2 194 aa28.75■■■□□ 2.19
LYSMD4-208ENST00000493256 PCNTO95613 3336 aa28.75■■■□□ 2.19
LYSMD4-208ENST00000493256 ADAMTSL1Q8N6G6 1762 aa28.75■■■□□ 2.19
LYSMD4-208ENST00000493256 DDX60Q8IY21 1712 aaKnown RBP28.74■■■□□ 2.19
LYSMD4-208ENST00000493256 ATP5J2-PTCD1G3V325 749 aa28.74■■■□□ 2.19
LYSMD4-208ENST00000493256 BBOX1O75936 387 aa28.74■■■□□ 2.19
LYSMD4-208ENST00000493256 ELL2O00472 640 aaPredicted RBP28.73■■■□□ 2.19
LYSMD4-208ENST00000493256 TAF1P21675 1872 aa28.73■■■□□ 2.19
LYSMD4-208ENST00000493256 DDX46Q7L014 1031 aaKnown RBP28.73■■■□□ 2.19
LYSMD4-208ENST00000493256 GJA3Q9Y6H8 435 aa28.73■■■□□ 2.19
LYSMD4-208ENST00000493256 PPIP5K2O43314 1243 aa28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 GRAPQ13588 217 aa28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 AOC3Q16853 763 aa28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 NIM1KQ8IY84 436 aa28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 GRAPLQ8TC17 118 aaPredicted RBP28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 CREBZFQ9NS37 354 aa28.72■■■□□ 2.19
LYSMD4-208ENST00000493256 PASKQ96RG2 1323 aa28.71■■■□□ 2.19
LYSMD4-208ENST00000493256 SP8Q8IXZ3 490 aa28.71■■■□□ 2.19
LYSMD4-208ENST00000493256 FAM89AQ96GI7 184 aa28.71■■■□□ 2.19
LYSMD4-208ENST00000493256 LTBP1Q14766 1721 aa28.7■■■□□ 2.19
LYSMD4-208ENST00000493256 PNMA8AQ86V59 439 aaPredicted RBP28.7■■■□□ 2.18
LYSMD4-208ENST00000493256 C8orf58Q8NAV2 365 aa28.7■■■□□ 2.18
LYSMD4-208ENST00000493256 RTFDC1Q9BY42 306 aaPredicted RBP28.7■■■□□ 2.18
LYSMD4-208ENST00000493256 CLEC11AQ9Y240 323 aa28.7■■■□□ 2.18
LYSMD4-208ENST00000493256 DPP8Q6V1X1 898 aaPredicted RBP28.69■■■□□ 2.18
LYSMD4-208ENST00000493256 VPS33BQ9H267 617 aa28.69■■■□□ 2.18
LYSMD4-208ENST00000493256 PHAXQ9H814 394 aaKnown RBP28.69■■■□□ 2.18
LYSMD4-208ENST00000493256 ITGBL1O95965 494 aaPredicted RBP28.68■■■□□ 2.18
LYSMD4-208ENST00000493256 GOLGA2Q08379 1002 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms