RNA–Protein interactions for RNA: ENST00000493092.1

APH1A-209, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1A, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-209ENST00000493092 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
APH1A-209ENST00000493092 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
APH1A-209ENST00000493092 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
APH1A-209ENST00000493092 UTP14AQ9BVJ6 771 aaKnown RBP16.53■□□□□ 0.24
APH1A-209ENST00000493092 ALDH1B1P30837 517 aa16.52■□□□□ 0.24
APH1A-209ENST00000493092 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
APH1A-209ENST00000493092 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
APH1A-209ENST00000493092 TCIRG1Q13488 830 aa16.52■□□□□ 0.24
APH1A-209ENST00000493092 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.24
APH1A-209ENST00000493092 ZNF277Q9NRM2 450 aaPredicted RBP16.52■□□□□ 0.24
APH1A-209ENST00000493092 DBF4Q9UBU7 674 aaPredicted RBP16.52■□□□□ 0.24
APH1A-209ENST00000493092 CACNA1SQ13698 1873 aa16.52■□□□□ 0.23
APH1A-209ENST00000493092 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
APH1A-209ENST00000493092 RIC1Q4ADV7 1423 aa16.52■□□□□ 0.23
APH1A-209ENST00000493092 HCLS1P14317 486 aaPredicted RBP16.51■□□□□ 0.23
APH1A-209ENST00000493092 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
APH1A-209ENST00000493092 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
APH1A-209ENST00000493092 ARFGEF2Q9Y6D5 1785 aa16.51■□□□□ 0.23
APH1A-209ENST00000493092 TIAM2Q8IVF5 1701 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 POTECB2RU33 542 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 TCERG1O14776 1098 aaKnown RBP16.5■□□□□ 0.23
APH1A-209ENST00000493092 FKBP4Q02790 459 aaKnown RBP eCLIP16.5■□□□□ 0.23
APH1A-209ENST00000493092 HSP90AB3PQ58FF7 597 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 WWC1Q8IX03 1113 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
APH1A-209ENST00000493092 TSPYL6Q8N831 410 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 PHAXQ9H814 394 aaKnown RBP16.5■□□□□ 0.23
APH1A-209ENST00000493092 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
APH1A-209ENST00000493092 ATP5J2-PTCD1G3V325 749 aa16.49■□□□□ 0.23
APH1A-209ENST00000493092 RTKN2Q8IZC4 609 aa16.49■□□□□ 0.23
APH1A-209ENST00000493092 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
APH1A-209ENST00000493092 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
APH1A-209ENST00000493092 TRMT112Q9UI30 125 aaKnown RBP16.49■□□□□ 0.23
APH1A-209ENST00000493092 DDNO94850 711 aaPredicted RBP16.48■□□□□ 0.23
APH1A-209ENST00000493092 NLRP3Q96P20 1036 aa16.48■□□□□ 0.23
APH1A-209ENST00000493092 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
APH1A-209ENST00000493092 VEGFAP15692 232 aaPredicted RBP16.47■□□□□ 0.23
APH1A-209ENST00000493092 CCDC27Q2M243 656 aa16.47■□□□□ 0.23
APH1A-209ENST00000493092 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
APH1A-209ENST00000493092 ISCA1Q9BUE6 129 aa16.47■□□□□ 0.23
APH1A-209ENST00000493092 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
APH1A-209ENST00000493092 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.23
APH1A-209ENST00000493092 CCDC88AQ3V6T2 1871 aa16.46■□□□□ 0.23
APH1A-209ENST00000493092 PPEF1O14829 653 aaPredicted RBP16.46■□□□□ 0.23
APH1A-209ENST00000493092 ABCC4O15439 1325 aa16.45■□□□□ 0.22
APH1A-209ENST00000493092 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
APH1A-209ENST00000493092 ZNF541Q9H0D2 1346 aa16.45■□□□□ 0.22
APH1A-209ENST00000493092 IARSP41252 1262 aaKnown RBP16.45■□□□□ 0.22
APH1A-209ENST00000493092 RTL5Q5HYW3 569 aaPredicted RBP16.45■□□□□ 0.22
APH1A-209ENST00000493092 FAM89AQ96GI7 184 aa16.45■□□□□ 0.22
APH1A-209ENST00000493092 PSMD1Q99460 953 aa16.45■□□□□ 0.22
APH1A-209ENST00000493092 ANKRD36CQ5JPF3 1778 aa16.44■□□□□ 0.22
APH1A-209ENST00000493092 COL4A5P29400 1685 aa16.44■□□□□ 0.22
APH1A-209ENST00000493092 HTRA3P83110 453 aa16.44■□□□□ 0.22
APH1A-209ENST00000493092 FSTL1Q12841 308 aa16.44■□□□□ 0.22
APH1A-209ENST00000493092 RIC3Q7Z5B4 369 aa16.44■□□□□ 0.22
APH1A-209ENST00000493092 APLP1P51693 650 aa16.43■□□□□ 0.22
APH1A-209ENST00000493092 GOLGA2Q08379 1002 aa16.43■□□□□ 0.22
APH1A-209ENST00000493092 CCDC30Q5VVM6 783 aa16.43■□□□□ 0.22
APH1A-209ENST00000493092 CC2D2BQ6DHV5 1058 aa16.43■□□□□ 0.22
APH1A-209ENST00000493092 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
APH1A-209ENST00000493092 WDR90Q96KV7 1748 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 POTEIP0CG38 1075 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 POTEJP0CG39 1038 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 TRIM28Q13263 835 aaKnown RBP16.42■□□□□ 0.22
APH1A-209ENST00000493092 FAM9BQ8IZU0 186 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 SMC1BQ8NDV3 1235 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 IL16Q14005 1332 aa16.42■□□□□ 0.22
APH1A-209ENST00000493092 DICER1Q9UPY3 1922 aaKnown RBP16.41■□□□□ 0.22
APH1A-209ENST00000493092 FZD9O00144 591 aa16.41■□□□□ 0.22
APH1A-209ENST00000493092 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
APH1A-209ENST00000493092 MYD88Q99836 296 aa16.41■□□□□ 0.22
APH1A-209ENST00000493092 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
APH1A-209ENST00000493092 NCBP3Q53F19 620 aaKnown RBP16.4■□□□□ 0.22
APH1A-209ENST00000493092 DDX46Q7L014 1031 aaKnown RBP16.4■□□□□ 0.22
APH1A-209ENST00000493092 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
APH1A-209ENST00000493092 L3MBTL3Q96JM7 780 aaPredicted RBP16.4■□□□□ 0.22
APH1A-209ENST00000493092 SPINK5Q9NQ38 1064 aaPredicted RBP16.4■□□□□ 0.22
APH1A-209ENST00000493092 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
APH1A-209ENST00000493092 IRS4O14654 1257 aaPredicted RBP16.39■□□□□ 0.21
APH1A-209ENST00000493092 BBOX1O75936 387 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 GRAPQ13588 217 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 G2E3Q7L622 706 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 SP8Q8IXZ3 490 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 LARGE2Q8N3Y3 721 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 GRAPLQ8TC17 118 aaPredicted RBP16.39■□□□□ 0.21
APH1A-209ENST00000493092 JDP2Q8WYK2 163 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 COL4A1P02462 1669 aa16.39■□□□□ 0.21
APH1A-209ENST00000493092 LAMB2P55268 1798 aa16.38■□□□□ 0.21
APH1A-209ENST00000493092 SF3B3Q15393 1217 aaKnown RBP16.38■□□□□ 0.21
APH1A-209ENST00000493092 AOC3Q16853 763 aa16.38■□□□□ 0.21
APH1A-209ENST00000493092 GRIPAP1Q4V328 841 aa16.38■□□□□ 0.21
APH1A-209ENST00000493092 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
APH1A-209ENST00000493092 METTL22Q9BUU2 404 aaPredicted RBP16.38■□□□□ 0.21
APH1A-209ENST00000493092 MAP3K2Q9Y2U5 619 aa16.38■□□□□ 0.21
APH1A-209ENST00000493092 DDX60Q8IY21 1712 aaKnown RBP16.37■□□□□ 0.21
APH1A-209ENST00000493092 PI4KAP2A4QPH2 592 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms