RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 KDM2BQ8NHM5 1336 aa24.45■■□□□ 1.5
SSC4D-202ENST00000492979 RASSF7Q02833 373 aa24.45■■□□□ 1.5
SSC4D-202ENST00000492979 NLRP10Q86W26 655 aa24.45■■□□□ 1.5
SSC4D-202ENST00000492979 CRAMP1Q96RY5 1269 aa24.45■■□□□ 1.5
SSC4D-202ENST00000492979 NUTM1Q86Y26 1132 aa24.44■■□□□ 1.5
SSC4D-202ENST00000492979 WDR63Q8IWG1 891 aa24.44■■□□□ 1.5
SSC4D-202ENST00000492979 NECTIN2Q92692 538 aa24.44■■□□□ 1.5
SSC4D-202ENST00000492979 FAM177BA6PVY3 158 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 CCDC93Q567U6 631 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 RTKN2Q8IZC4 609 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 C8orf58Q8NAV2 365 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 ISCA1Q9BUE6 129 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 TAOK3Q9H2K8 898 aa24.43■■□□□ 1.5
SSC4D-202ENST00000492979 GLTPD2A6NH11 291 aa24.42■■□□□ 1.5
SSC4D-202ENST00000492979 AIMP1Q12904 312 aaKnown RBP24.42■■□□□ 1.5
SSC4D-202ENST00000492979 NLRP3Q96P20 1036 aa24.42■■□□□ 1.5
SSC4D-202ENST00000492979 SNED1Q8TER0 1413 aa24.42■■□□□ 1.5
SSC4D-202ENST00000492979 ANKRD36CQ5JPF3 1778 aa24.42■■□□□ 1.5
SSC4D-202ENST00000492979 DICER1Q9UPY3 1922 aaKnown RBP24.41■■□□□ 1.5
SSC4D-202ENST00000492979 TOMM70O94826 608 aa24.41■■□□□ 1.5
SSC4D-202ENST00000492979 CCDC30Q5VVM6 783 aa24.41■■□□□ 1.5
SSC4D-202ENST00000492979 ZNF526Q8TF50 670 aaPredicted RBP24.41■■□□□ 1.5
SSC4D-202ENST00000492979 FKBP4Q02790 459 aaKnown RBP eCLIP24.39■■□□□ 1.49
SSC4D-202ENST00000492979 PSMD1Q99460 953 aa24.39■■□□□ 1.49
SSC4D-202ENST00000492979 TNRC6CQ9HCJ0 1690 aaKnown RBP24.39■■□□□ 1.49
SSC4D-202ENST00000492979 SH3TC1Q8TE82 1336 aa24.38■■□□□ 1.49
SSC4D-202ENST00000492979 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
SSC4D-202ENST00000492979 RBM17Q96I25 401 aaKnown RBP24.38■■□□□ 1.49
SSC4D-202ENST00000492979 NMRK2Q9NPI5 230 aa24.38■■□□□ 1.49
SSC4D-202ENST00000492979 CCDC88AQ3V6T2 1871 aa24.37■■□□□ 1.49
SSC4D-202ENST00000492979 DPY19L2Q6NUT2 758 aa24.36■■□□□ 1.49
SSC4D-202ENST00000492979 TSPYL6Q8N831 410 aa24.36■■□□□ 1.49
SSC4D-202ENST00000492979 RBM46Q8TBY0 533 aaKnown RBP24.36■■□□□ 1.49
SSC4D-202ENST00000492979 TRMT112Q9UI30 125 aaKnown RBP24.36■■□□□ 1.49
SSC4D-202ENST00000492979 ELL2O00472 640 aaPredicted RBP24.35■■□□□ 1.49
SSC4D-202ENST00000492979 BBOX1O75936 387 aa24.34■■□□□ 1.49
SSC4D-202ENST00000492979 GOLGA2Q08379 1002 aa24.34■■□□□ 1.49
SSC4D-202ENST00000492979 C3orf67Q6ZVT6 689 aa24.34■■□□□ 1.49
SSC4D-202ENST00000492979 VPS33BQ9H267 617 aa24.34■■□□□ 1.49
SSC4D-202ENST00000492979 PHAXQ9H814 394 aaKnown RBP24.34■■□□□ 1.49
SSC4D-202ENST00000492979 ZNF219Q9P2Y4 722 aaPredicted RBP24.34■■□□□ 1.49
SSC4D-202ENST00000492979 CEP350Q5VT06 3117 aa24.33■■□□□ 1.49
SSC4D-202ENST00000492979 DDX58O95786 925 aaKnown RBP24.33■■□□□ 1.49
SSC4D-202ENST00000492979 VEGFAP15692 232 aaPredicted RBP24.33■■□□□ 1.49
SSC4D-202ENST00000492979 SF3B3Q15393 1217 aaKnown RBP24.33■■□□□ 1.49
SSC4D-202ENST00000492979 CACNA1SQ13698 1873 aa24.32■■□□□ 1.48
SSC4D-202ENST00000492979 TWISTNBQ3B726 338 aaPredicted RBP24.32■■□□□ 1.48
SSC4D-202ENST00000492979 CCDC191Q8NCU4 936 aa24.32■■□□□ 1.48
SSC4D-202ENST00000492979 TSR2Q969E8 191 aaKnown RBP24.32■■□□□ 1.48
SSC4D-202ENST00000492979 HSP90B1P14625 803 aaKnown RBP24.31■■□□□ 1.48
SSC4D-202ENST00000492979 HSPA6P17066 643 aa24.31■■□□□ 1.48
SSC4D-202ENST00000492979 FSTL1Q12841 308 aa24.31■■□□□ 1.48
SSC4D-202ENST00000492979 TMC4Q7Z404 712 aa24.31■■□□□ 1.48
SSC4D-202ENST00000492979 RIC3Q7Z5B4 369 aa24.31■■□□□ 1.48
SSC4D-202ENST00000492979 ATP6V0A2Q9Y487 856 aa24.31■■□□□ 1.48
SSC4D-202ENST00000492979 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
SSC4D-202ENST00000492979 WDR90Q96KV7 1748 aa24.3■■□□□ 1.48
SSC4D-202ENST00000492979 ZBTB38Q8NAP3 1195 aaPredicted RBP24.3■■□□□ 1.48
SSC4D-202ENST00000492979 METTL22Q9BUU2 404 aaPredicted RBP24.3■■□□□ 1.48
SSC4D-202ENST00000492979 RRAGCQ9HB90 399 aa24.3■■□□□ 1.48
SSC4D-202ENST00000492979 POTECB2RU33 542 aa24.29■■□□□ 1.48
SSC4D-202ENST00000492979 SYNE4Q8N205 404 aa24.29■■□□□ 1.48
SSC4D-202ENST00000492979 STK31Q9BXU1 1019 aa24.29■■□□□ 1.48
SSC4D-202ENST00000492979 ZNF521Q96K83 1311 aa24.29■■□□□ 1.48
SSC4D-202ENST00000492979 FANCIQ9NVI1 1328 aa24.29■■□□□ 1.48
SSC4D-202ENST00000492979 FZD9O00144 591 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 PPEF1O14829 653 aaPredicted RBP24.28■■□□□ 1.48
SSC4D-202ENST00000492979 HCLS1P14317 486 aaPredicted RBP24.28■■□□□ 1.48
SSC4D-202ENST00000492979 OLFM4Q6UX06 510 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 KSR2Q6VAB6 950 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 SP8Q8IXZ3 490 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 L3MBTL3Q96JM7 780 aaPredicted RBP24.28■■□□□ 1.48
SSC4D-202ENST00000492979 RTFDC1Q9BY42 306 aaPredicted RBP24.28■■□□□ 1.48
SSC4D-202ENST00000492979 CACNA1FO60840 1977 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 ABCC4O15439 1325 aa24.28■■□□□ 1.48
SSC4D-202ENST00000492979 SENP3-EIF4A1A0A087X0R7 540 aa24.27■■□□□ 1.48
SSC4D-202ENST00000492979 ATP5J2-PTCD1G3V325 749 aa24.27■■□□□ 1.48
SSC4D-202ENST00000492979 VAMP4O75379 141 aa24.27■■□□□ 1.48
SSC4D-202ENST00000492979 IARSP41252 1262 aaKnown RBP24.27■■□□□ 1.48
SSC4D-202ENST00000492979 FAM9BQ8IZU0 186 aa24.27■■□□□ 1.48
SSC4D-202ENST00000492979 GRAPQ13588 217 aa24.26■■□□□ 1.47
SSC4D-202ENST00000492979 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
SSC4D-202ENST00000492979 C16orf71Q8IYS4 520 aaPredicted RBP24.26■■□□□ 1.47
SSC4D-202ENST00000492979 GRAPLQ8TC17 118 aaPredicted RBP24.26■■□□□ 1.47
SSC4D-202ENST00000492979 FAM89AQ96GI7 184 aa24.26■■□□□ 1.47
SSC4D-202ENST00000492979 LAMB2P55268 1798 aa24.25■■□□□ 1.47
SSC4D-202ENST00000492979 PCCAP05165 728 aaPredicted RBP24.25■■□□□ 1.47
SSC4D-202ENST00000492979 ZNF277Q9NRM2 450 aaPredicted RBP24.25■■□□□ 1.47
SSC4D-202ENST00000492979 TMX4Q9H1E5 349 aaPredicted RBP24.24■■□□□ 1.47
SSC4D-202ENST00000492979 MYH16Q9H6N6 1097 aa24.24■■□□□ 1.47
SSC4D-202ENST00000492979 PI4KAP2A4QPH2 592 aa24.23■■□□□ 1.47
SSC4D-202ENST00000492979 CCER2I3L3R5 266 aa24.23■■□□□ 1.47
SSC4D-202ENST00000492979 IRS4O14654 1257 aaPredicted RBP24.23■■□□□ 1.47
SSC4D-202ENST00000492979 SLC4A2P04920 1241 aa24.23■■□□□ 1.47
SSC4D-202ENST00000492979 PI4KAP1Q8N8J0 262 aa24.23■■□□□ 1.47
SSC4D-202ENST00000492979 CWC25Q9NXE8 425 aaPredicted RBP24.23■■□□□ 1.47
SSC4D-202ENST00000492979 DDX60Q8IY21 1712 aaKnown RBP24.23■■□□□ 1.47
SSC4D-202ENST00000492979 SMC1BQ8NDV3 1235 aa24.22■■□□□ 1.47
SSC4D-202ENST00000492979 SUPT20HQ8NEM7 779 aa24.22■■□□□ 1.47
SSC4D-202ENST00000492979 MYD88Q99836 296 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms