RNA–Protein interactions for RNA: ENST00000492934.1

SPTA1-208, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-208ENST00000492934 PANK3Q9H999 370 aa9.86□□□□□ -0.83
SPTA1-208ENST00000492934 KIF13BQ9NQT8 1826 aa9.86□□□□□ -0.83
SPTA1-208ENST00000492934 CNTNAP4Q9C0A0 1308 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 TJP1Q07157 1748 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 TRIM6-TRIM34B2RNG4 842 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 ERVV-2B6SEH9 535 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 CABP4P57796 275 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 C1orf141Q5JVX7 400 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 C6orf132Q5T0Z8 1188 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 MORC1Q86VD1 984 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 SLC4A9Q96Q91 983 aa9.85□□□□□ -0.83
SPTA1-208ENST00000492934 N4BP2Q86UW6 1770 aaPredicted RBP9.84□□□□□ -0.83
SPTA1-208ENST00000492934 AMOTQ4VCS5 1084 aa9.84□□□□□ -0.83
SPTA1-208ENST00000492934 TRAPPC3LQ5T215 181 aa9.84□□□□□ -0.83
SPTA1-208ENST00000492934 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
SPTA1-208ENST00000492934 PTCD1O75127 700 aaKnown RBP9.83□□□□□ -0.84
SPTA1-208ENST00000492934 RFC4P35249 363 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 MTHFSP49914 203 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 NLGN1Q8N2Q7 840 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 CCDC87Q9NVE4 849 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 BCS1LQ9Y276 419 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 MRC1P22897 1456 aa9.83□□□□□ -0.84
SPTA1-208ENST00000492934 GYS1P13807 737 aa9.82□□□□□ -0.84
SPTA1-208ENST00000492934 RC3H1Q5TC82 1133 aaKnown RBP9.82□□□□□ -0.84
SPTA1-208ENST00000492934 SULT6B1Q6IMI4 303 aa9.82□□□□□ -0.84
SPTA1-208ENST00000492934 ARHGEF1Q92888 912 aaKnown RBP9.82□□□□□ -0.84
SPTA1-208ENST00000492934 KNSTRNQ9Y448 316 aa9.82□□□□□ -0.84
SPTA1-208ENST00000492934 PARP3Q9Y6F1 533 aa9.82□□□□□ -0.84
SPTA1-208ENST00000492934 SCN11AQ9UI33 1791 aa9.81□□□□□ -0.84
SPTA1-208ENST00000492934 RPS6KA4O75676 772 aa9.81□□□□□ -0.84
SPTA1-208ENST00000492934 CRKLP46109 303 aaKnown RBP9.81□□□□□ -0.84
SPTA1-208ENST00000492934 TGFB2P61812 414 aa9.81□□□□□ -0.84
SPTA1-208ENST00000492934 CCER1Q8TC90 406 aaPredicted RBP9.81□□□□□ -0.84
SPTA1-208ENST00000492934 V9GY48 417 aaPredicted RBP9.81□□□□□ -0.84
SPTA1-208ENST00000492934 BRCA1P38398 1863 aaKnown RBP9.81□□□□□ -0.84
SPTA1-208ENST00000492934 A0A0G2JLW4 131 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 FCHSD2O94868 740 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 DPEP1P16444 411 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 HSPA6P17066 643 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 PPP4CP60510 307 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 ZNF787Q6DD87 383 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 SRP68Q9UHB9 627 aaKnown RBP9.8□□□□□ -0.84
SPTA1-208ENST00000492934 ADAMTS7Q9UKP4 1686 aa9.8□□□□□ -0.84
SPTA1-208ENST00000492934 USP42Q9H9J4 1324 aaKnown RBP9.8□□□□□ -0.84
SPTA1-208ENST00000492934 MYH14Q7Z406 1995 aaKnown RBP9.79□□□□□ -0.84
SPTA1-208ENST00000492934 KCPQ6ZWJ8 1503 aa9.79□□□□□ -0.84
SPTA1-208ENST00000492934 IL13P35225 146 aa9.79□□□□□ -0.84
SPTA1-208ENST00000492934 TJAP1Q5JTD0 557 aa9.79□□□□□ -0.84
SPTA1-208ENST00000492934 NFATC2IPQ8NCF5 419 aa9.79□□□□□ -0.84
SPTA1-208ENST00000492934 DDX12PQ92771 950 aa9.79□□□□□ -0.84
SPTA1-208ENST00000492934 DDR1Q08345 913 aa9.78□□□□□ -0.84
SPTA1-208ENST00000492934 AKAP4Q5JQC9 854 aa9.78□□□□□ -0.84
SPTA1-208ENST00000492934 ARHGAP27Q6ZUM4 889 aa9.78□□□□□ -0.84
SPTA1-208ENST00000492934 KIF7Q2M1P5 1343 aa9.78□□□□□ -0.84
SPTA1-208ENST00000492934 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.84
SPTA1-208ENST00000492934 COL15A1P39059 1388 aa9.77□□□□□ -0.84
SPTA1-208ENST00000492934 HMOX1P09601 288 aa9.77□□□□□ -0.85
SPTA1-208ENST00000492934 DNAJC10Q8IXB1 793 aa9.77□□□□□ -0.85
SPTA1-208ENST00000492934 SLC52A2Q9HAB3 445 aa9.77□□□□□ -0.85
SPTA1-208ENST00000492934 SOS1Q07889 1333 aaPredicted RBP9.77□□□□□ -0.85
SPTA1-208ENST00000492934 PPP1R18Q6NYC8 613 aa9.76□□□□□ -0.85
SPTA1-208ENST00000492934 UBR2Q8IWV8 1755 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 SCN7AQ01118 1682 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 COL3A1P02461 1466 aaPredicted RBP9.75□□□□□ -0.85
SPTA1-208ENST00000492934 POLRMTO00411 1230 aaKnown RBP9.75□□□□□ -0.85
SPTA1-208ENST00000492934 ZPR1O75312 459 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 CHRNA5P30532 468 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 SLC39A6Q13433 755 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 NBR1Q14596 966 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 DALRD3Q5D0E6 543 aaKnown RBP9.75□□□□□ -0.85
SPTA1-208ENST00000492934 C9orf131Q5VYM1 1079 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 USPL1Q5W0Q7 1092 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 INTS5Q6P9B9 1019 aaKnown RBP9.75□□□□□ -0.85
SPTA1-208ENST00000492934 PACS2Q86VP3 889 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 NMRK2Q9NPI5 230 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 PIM2Q9P1W9 311 aa9.75□□□□□ -0.85
SPTA1-208ENST00000492934 VIRMAQ69YN4 1812 aaKnown RBP9.75□□□□□ -0.85
SPTA1-208ENST00000492934 TNRC6CQ9HCJ0 1690 aaKnown RBP9.74□□□□□ -0.85
SPTA1-208ENST00000492934 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
SPTA1-208ENST00000492934 CYP19A1P11511 503 aaPredicted RBP9.74□□□□□ -0.85
SPTA1-208ENST00000492934 KCNA3P22001 575 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 CC2D1BQ5T0F9 858 aaKnown RBP9.74□□□□□ -0.85
SPTA1-208ENST00000492934 KCNV2Q8TDN2 545 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 IL21Q9HBE4 155 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 LGR6Q9HBX8 967 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 ZBTB1Q9Y2K1 713 aa9.74□□□□□ -0.85
SPTA1-208ENST00000492934 NRXN2Q9P2S2 1712 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 DLEC1Q9Y238 1755 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 DIAPH1O60610 1272 aaKnown RBP9.73□□□□□ -0.85
SPTA1-208ENST00000492934 TOMM70O94826 608 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 APLP1P51693 650 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 MTHFSDQ2M296 383 aaKnown RBP9.73□□□□□ -0.85
SPTA1-208ENST00000492934 C16orf71Q8IYS4 520 aaPredicted RBP9.73□□□□□ -0.85
SPTA1-208ENST00000492934 ZNF775Q96BV0 537 aaPredicted RBP9.73□□□□□ -0.85
SPTA1-208ENST00000492934 CARMIL3Q8ND23 1372 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 TIAM2Q8IVF5 1701 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 WDR90Q96KV7 1748 aa9.73□□□□□ -0.85
SPTA1-208ENST00000492934 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
SPTA1-208ENST00000492934 TTC5Q8N0Z6 440 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms