RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 COL4A5P29400 1685 aa14.64□□□□□ -0.07
SND1-215ENST00000492772 LMOD1P29536 600 aaPredicted RBP14.63□□□□□ -0.07
SND1-215ENST00000492772 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
SND1-215ENST00000492772 EIF6P56537 245 aaKnown RBP14.63□□□□□ -0.07
SND1-215ENST00000492772 DEFB115Q30KQ5 88 aa14.63□□□□□ -0.07
SND1-215ENST00000492772 KIF6Q6ZMV9 814 aa14.63□□□□□ -0.07
SND1-215ENST00000492772 RPGRQ92834 1020 aaKnown RBP14.63□□□□□ -0.07
SND1-215ENST00000492772 MAP3K15Q6ZN16 1313 aa14.63□□□□□ -0.07
SND1-215ENST00000492772 LBX1P52954 281 aa14.62□□□□□ -0.07
SND1-215ENST00000492772 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
SND1-215ENST00000492772 PNISRQ8TF01 805 aaKnown RBP14.62□□□□□ -0.07
SND1-215ENST00000492772 TRPM7Q96QT4 1865 aa14.62□□□□□ -0.07
SND1-215ENST00000492772 ABT1Q9ULW3 272 aaKnown RBP14.62□□□□□ -0.07
SND1-215ENST00000492772 WDR33Q9C0J8 1336 aaKnown RBP14.62□□□□□ -0.07
SND1-215ENST00000492772 NEFMP07197 916 aa14.61□□□□□ -0.07
SND1-215ENST00000492772 HOXA10P31260 410 aaPredicted RBP14.61□□□□□ -0.07
SND1-215ENST00000492772 NUTM1Q86Y26 1132 aa14.61□□□□□ -0.07
SND1-215ENST00000492772 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.073e-6■■■■■ 34.3
SND1-215ENST00000492772 GJA3Q9Y6H8 435 aa14.61□□□□□ -0.07
SND1-215ENST00000492772 HSPA8P11142 646 aaKnown RBP14.6□□□□□ -0.07
SND1-215ENST00000492772 LARGE2Q8N3Y3 721 aa14.6□□□□□ -0.07
SND1-215ENST00000492772 PPEF1O14829 653 aaPredicted RBP14.59□□□□□ -0.07
SND1-215ENST00000492772 SCNN1DP51172 638 aa14.59□□□□□ -0.07
SND1-215ENST00000492772 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
SND1-215ENST00000492772 RBM17Q96I25 401 aaKnown RBP14.59□□□□□ -0.07
SND1-215ENST00000492772 CRAMP1Q96RY5 1269 aa14.59□□□□□ -0.07
SND1-215ENST00000492772 MIS18AQ9NYP9 233 aa14.59□□□□□ -0.07
SND1-215ENST00000492772 UBN2Q6ZU65 1347 aa14.59□□□□□ -0.07
SND1-215ENST00000492772 GPTP24298 496 aa14.58□□□□□ -0.08
SND1-215ENST00000492772 ECE1P42892 770 aa14.58□□□□□ -0.08
SND1-215ENST00000492772 TTLL7Q6ZT98 887 aa14.58□□□□□ -0.08
SND1-215ENST00000492772 USP50Q70EL3 339 aaPredicted RBP14.58□□□□□ -0.08
SND1-215ENST00000492772 NIM1KQ8IY84 436 aa14.58□□□□□ -0.08
SND1-215ENST00000492772 ERBB4Q15303 1308 aa14.58□□□□□ -0.08
SND1-215ENST00000492772 ANKRD36CQ5JPF3 1778 aa14.57□□□□□ -0.08
SND1-215ENST00000492772 EIF4A1P60842 406 aaKnown RBP14.57□□□□□ -0.08
SND1-215ENST00000492772 ABHD8Q96I13 439 aa14.57□□□□□ -0.08
SND1-215ENST00000492772 CAPNS2Q96L46 248 aa14.57□□□□□ -0.08
SND1-215ENST00000492772 BEGAINQ9BUH8 593 aa14.57□□□□□ -0.08
SND1-215ENST00000492772 TMX4Q9H1E5 349 aaPredicted RBP14.57□□□□□ -0.08
SND1-215ENST00000492772 ZBTB3Q9H5J0 574 aa14.57□□□□□ -0.08
SND1-215ENST00000492772 RRP7AQ9Y3A4 280 aaKnown RBP14.57□□□□□ -0.08
SND1-215ENST00000492772 NTSR2O95665 410 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 MYL6BP14649 208 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 EPS15P42566 896 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 PARP10Q53GL7 1025 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 SUSD4Q5VX71 490 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 PAXIP1Q6ZW49 1069 aaPredicted RBP14.56□□□□□ -0.08
SND1-215ENST00000492772 PPP1R42Q7Z4L9 355 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 ZNF34Q8IZ26 560 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
SND1-215ENST00000492772 LAMB2P55268 1798 aa14.55□□□□□ -0.08
SND1-215ENST00000492772 PPIP5K2O43314 1243 aa14.55□□□□□ -0.08
SND1-215ENST00000492772 GIGYF2Q6Y7W6 1299 aaKnown RBP14.55□□□□□ -0.08
SND1-215ENST00000492772 NFE2L2Q16236 605 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 SUPT20HQ8NEM7 779 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 NLRP3Q96P20 1036 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 ADARB2Q9NS39 739 aaKnown RBP14.54□□□□□ -0.08
SND1-215ENST00000492772 GPRC5DQ9NZD1 345 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 TLL2Q9Y6L7 1015 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 CDHR2Q9BYE9 1310 aa14.54□□□□□ -0.08
SND1-215ENST00000492772 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
SND1-215ENST00000492772 AOC3Q16853 763 aa14.53□□□□□ -0.08
SND1-215ENST00000492772 CYP4F22Q6NT55 531 aa14.53□□□□□ -0.08
SND1-215ENST00000492772 GPR101Q96P66 508 aaPredicted RBP14.53□□□□□ -0.08
SND1-215ENST00000492772 ATP6V0A2Q9Y487 856 aa14.53□□□□□ -0.08
SND1-215ENST00000492772 ABCC4O15439 1325 aa14.52□□□□□ -0.08
SND1-215ENST00000492772 MAPK8IP3Q9UPT6 1336 aa14.52□□□□□ -0.08
SND1-215ENST00000492772 TRAF5O00463 557 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 FMR1Q06787 632 aaKnown RBP eCLIP14.52□□□□□ -0.092e-7■□□□□ 9.4
SND1-215ENST00000492772 GRM1Q13255 1194 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 CST9Q5W186 159 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 C3orf67Q6ZVT6 689 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 SLC51AQ86UW1 340 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 PLEKHF1Q96S99 279 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 RTFDC1Q9BY42 306 aaPredicted RBP14.52□□□□□ -0.09
SND1-215ENST00000492772 PNNQ9H307 717 aaKnown RBP14.52□□□□□ -0.09
SND1-215ENST00000492772 ZNRF3Q9ULT6 936 aa14.52□□□□□ -0.09
SND1-215ENST00000492772 MAP2K2P36507 400 aa14.51□□□□□ -0.09
SND1-215ENST00000492772 SLC10A5Q5PT55 438 aa14.51□□□□□ -0.09
SND1-215ENST00000492772 THUMPD2Q9BTF0 503 aaKnown RBP14.51□□□□□ -0.09
SND1-215ENST00000492772 UTP14AQ9BVJ6 771 aaKnown RBP14.51□□□□□ -0.09
SND1-215ENST00000492772 LRRC37AA6NMS7 1700 aa14.51□□□□□ -0.09
SND1-215ENST00000492772 CA12O43570 354 aa14.5□□□□□ -0.09
SND1-215ENST00000492772 CXCL9Q07325 125 aa14.5□□□□□ -0.09
SND1-215ENST00000492772 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
SND1-215ENST00000492772 DPP8Q6V1X1 898 aaPredicted RBP14.5□□□□□ -0.09
SND1-215ENST00000492772 HHIPL1Q96JK4 782 aa14.5□□□□□ -0.09
SND1-215ENST00000492772 BBOX1O75936 387 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 CELF2O95319 508 aaKnown RBP14.49□□□□□ -0.09
SND1-215ENST00000492772 GMPSP49915 693 aaPredicted RBP14.49□□□□□ -0.09
SND1-215ENST00000492772 HSP90AB3PQ58FF7 597 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 CIAPIN1Q6FI81 312 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 LRP10Q7Z4F1 713 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 SAPCD2Q86UD0 394 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 TSPYL4Q9UJ04 414 aa14.49□□□□□ -0.09
SND1-215ENST00000492772 DUOX1Q9NRD9 1551 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 KIAA2012Q0VF49 1180 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 TNIP1Q15025 636 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 PDIA6Q15084 440 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms