RNA–Protein interactions for RNA: ENST00000492692.1

CSMD3-206, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 1,830 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-206ENST00000492692 SAMD9LQ8IVG5 1584 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 TUBB4AP04350 444 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 NF2P35240 595 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 LMAN1P49257 510 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 MCM6Q14566 821 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 NYAP1Q6ZVC0 841 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 MICALL1Q8N3F8 863 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
CSMD3-206ENST00000492692 NEURL4Q96JN8 1562 aa12.99□□□□□ -0.33
CSMD3-206ENST00000492692 CDC42BPBQ9Y5S2 1711 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 ERLIN2O94905 339 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 CCNHP51946 323 aaPredicted RBP12.98□□□□□ -0.33
CSMD3-206ENST00000492692 RASA3Q14644 834 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 SMC1AQ14683 1233 aaKnown RBP12.98□□□□□ -0.33
CSMD3-206ENST00000492692 KCNV1Q6PIU1 500 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 PDRG1Q9NUG6 133 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 IQSEC2Q5JU85 1478 aa12.98□□□□□ -0.33
CSMD3-206ENST00000492692 A0A1B0GUA9 196 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 H7C1W4 665 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 PES1O00541 588 aaKnown RBP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 ACRBPQ8NEB7 543 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 N4BP2L2Q92802 583 aaPredicted RBP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 SHPRHQ149N8 1683 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 ALDH1B1P30837 517 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 MVPQ14764 893 aaKnown RBP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 HSP90B2PQ58FF3 399 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 WLSQ5T9L3 541 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 CPLX2Q6PUV4 134 aaKnown RBP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
CSMD3-206ENST00000492692 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.97□□□□□ -0.33
CSMD3-206ENST00000492692 CHUKO15111 745 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 NEMFO60524 1076 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 ECEL1O95672 775 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 SCRN1Q12765 414 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 TPD52L1Q16890 204 aaPredicted RBP12.96□□□□□ -0.33
CSMD3-206ENST00000492692 CCDC183Q5T5S1 534 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 AGAP3Q96P47 875 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 IFT57Q9NWB7 429 aa12.96□□□□□ -0.33
CSMD3-206ENST00000492692 NSFL1CQ9UNZ2 370 aaKnown RBP12.96□□□□□ -0.33
CSMD3-206ENST00000492692 ATP10BO94823 1461 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 PPFIA4O75335 1185 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 CD2BP2O95400 341 aaKnown RBP12.95□□□□□ -0.34
CSMD3-206ENST00000492692 RAB27AP51159 221 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 FAM177A1Q8N128 213 aaPredicted RBP12.95□□□□□ -0.34
CSMD3-206ENST00000492692 BICD2Q8TD16 824 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 KAT2BQ92831 832 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 PLEKHG4BQ96PX9 1271 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 IQCGQ9H095 443 aaKnown RBP12.95□□□□□ -0.34
CSMD3-206ENST00000492692 RLBP1P12271 317 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 SNRNP27Q8WVK2 155 aaKnown RBP12.95□□□□□ -0.34
CSMD3-206ENST00000492692 DMRT2Q9Y5R5 561 aa12.95□□□□□ -0.34
CSMD3-206ENST00000492692 ADGRL1O94910 1474 aa12.94□□□□□ -0.34
CSMD3-206ENST00000492692 HHATQ5VTY9 493 aa12.94□□□□□ -0.34
CSMD3-206ENST00000492692 KIAA1328Q86T90 577 aa12.94□□□□□ -0.34
CSMD3-206ENST00000492692 PRPF38AQ8NAV1 312 aaKnown RBP12.94□□□□□ -0.34
CSMD3-206ENST00000492692 AP1G2O75843 785 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 SLC8A3P57103 927 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 CCDC93Q567U6 631 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 RCSD1Q6JBY9 416 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 NBPF15Q8N660 670 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 SYNPO2Q9UMS6 1093 aa12.93□□□□□ -0.34
CSMD3-206ENST00000492692 ATXN2Q99700 1313 aaKnown RBP12.93□□□□□ -0.34
CSMD3-206ENST00000492692 PTGS1P23219 599 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 PTPN14Q15678 1187 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 CCDC158Q5M9N0 1113 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ZKSCAN2Q63HK3 967 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 CDCA2Q69YH5 1023 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 CABS1Q96KC9 395 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 FOXD4L1Q9NU39 408 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ZDHHC9Q9Y397 364 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 SYNRGQ9UMZ2 1314 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 EME2A4GXA9 379 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ZSCAN9O15535 394 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 OATP04181 439 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 HNRNPMP52272 730 aaKnown RBP eCLIP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 FOXD4L6Q3SYB3 417 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 FILIP1LQ4L180 1135 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ISM2Q6H9L7 571 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 FOXD4L3Q6VB84 417 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 TMEM87AQ8NBN3 555 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 FUCA2Q9BTY2 467 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 RMI1Q9H9A7 625 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ORC3Q9UBD5 711 aaPredicted RBP12.92□□□□□ -0.34
CSMD3-206ENST00000492692 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
CSMD3-206ENST00000492692 MYO3AQ8NEV4 1616 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 TRPM2O94759 1503 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 CFAP74Q9C0B2 1584 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 CCDC178Q5BJE1 867 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 ZSCAN25Q6NSZ9 544 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 SDCCAG8Q86SQ7 713 aaPredicted RBP12.91□□□□□ -0.34
CSMD3-206ENST00000492692 TMX3Q96JJ7 454 aa12.91□□□□□ -0.34
CSMD3-206ENST00000492692 JPH2Q9BR39 696 aaPredicted RBP12.91□□□□□ -0.34
CSMD3-206ENST00000492692 UBA5Q9GZZ9 404 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms