RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 PARP10Q53GL7 1025 aa24.02■■□□□ 1.44
SMIM4-205ENST00000491607 RIC1Q4ADV7 1423 aa24.01■■□□□ 1.43
SMIM4-205ENST00000491607 COPS6Q7L5N1 327 aa24■■□□□ 1.43
SMIM4-205ENST00000491607 XAGE3Q8WTP9 111 aa24■■□□□ 1.43
SMIM4-205ENST00000491607 SYNE4Q8N205 404 aa23.99■■□□□ 1.43
SMIM4-205ENST00000491607 RBM17Q96I25 401 aaKnown RBP23.99■■□□□ 1.43
SMIM4-205ENST00000491607 UTP14AQ9BVJ6 771 aaKnown RBP23.99■■□□□ 1.43
SMIM4-205ENST00000491607 HOXA10P31260 410 aaPredicted RBP23.98■■□□□ 1.43
SMIM4-205ENST00000491607 IARSP41252 1262 aaKnown RBP23.98■■□□□ 1.43
SMIM4-205ENST00000491607 KLRG1Q96E93 195 aa23.98■■□□□ 1.43
SMIM4-205ENST00000491607 TCERG1O14776 1098 aaKnown RBP23.97■■□□□ 1.43
SMIM4-205ENST00000491607 NLRP3Q96P20 1036 aa23.97■■□□□ 1.43
SMIM4-205ENST00000491607 DDX21Q9NR30 783 aaKnown RBP eCLIP23.97■■□□□ 1.43
SMIM4-205ENST00000491607 ZNF541Q9H0D2 1346 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 IQCA1LA6NCM1 817 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 HSP90AB3PQ58FF7 597 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 CC2D2BQ6DHV5 1058 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 C3orf67Q6ZVT6 689 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
SMIM4-205ENST00000491607 PPEF1O14829 653 aaPredicted RBP23.95■■□□□ 1.42
SMIM4-205ENST00000491607 CRAMP1Q96RY5 1269 aa23.95■■□□□ 1.42
SMIM4-205ENST00000491607 PSMD1Q99460 953 aa23.95■■□□□ 1.42
SMIM4-205ENST00000491607 POTEIP0CG38 1075 aa23.94■■□□□ 1.42
SMIM4-205ENST00000491607 POTEJP0CG39 1038 aa23.94■■□□□ 1.42
SMIM4-205ENST00000491607 CHADLQ6NUI6 762 aa23.94■■□□□ 1.42
SMIM4-205ENST00000491607 CFAP44Q96MT7 982 aa23.94■■□□□ 1.42
SMIM4-205ENST00000491607 SNED1Q8TER0 1413 aa23.93■■□□□ 1.42
SMIM4-205ENST00000491607 NLRP10Q86W26 655 aa23.93■■□□□ 1.42
SMIM4-205ENST00000491607 JDP2Q8WYK2 163 aa23.93■■□□□ 1.42
SMIM4-205ENST00000491607 L3MBTL3Q96JM7 780 aaPredicted RBP23.93■■□□□ 1.42
SMIM4-205ENST00000491607 RNF123Q5XPI4 1314 aa23.92■■□□□ 1.42
SMIM4-205ENST00000491607 HOXB7P09629 217 aa23.92■■□□□ 1.42
SMIM4-205ENST00000491607 TCIRG1Q13488 830 aa23.92■■□□□ 1.42
SMIM4-205ENST00000491607 SLC10A5Q5PT55 438 aa23.92■■□□□ 1.42
SMIM4-205ENST00000491607 SLC51AQ86UW1 340 aa23.92■■□□□ 1.42
SMIM4-205ENST00000491607 TMX4Q9H1E5 349 aaPredicted RBP23.92■■□□□ 1.42
SMIM4-205ENST00000491607 TRMT112Q9UI30 125 aaKnown RBP23.92■■□□□ 1.42
SMIM4-205ENST00000491607 ANKRD36CQ5JPF3 1778 aa23.91■■□□□ 1.42
SMIM4-205ENST00000491607 APAF1O14727 1248 aa23.91■■□□□ 1.42
SMIM4-205ENST00000491607 GRIPAP1Q4V328 841 aa23.91■■□□□ 1.42
SMIM4-205ENST00000491607 TAF1DQ9H5J8 278 aaPredicted RBP23.91■■□□□ 1.42
SMIM4-205ENST00000491607 MBIPQ9NS73 344 aa23.91■■□□□ 1.42
SMIM4-205ENST00000491607 DBF4Q9UBU7 674 aaPredicted RBP23.91■■□□□ 1.42
SMIM4-205ENST00000491607 FZD9O00144 591 aa23.9■■□□□ 1.42
SMIM4-205ENST00000491607 HCLS1P14317 486 aaPredicted RBP23.9■■□□□ 1.42
SMIM4-205ENST00000491607 DUSP27Q5VZP5 1158 aa23.9■■□□□ 1.42
SMIM4-205ENST00000491607 ZNF428Q96B54 188 aa23.9■■□□□ 1.42
SMIM4-205ENST00000491607 HACL1Q9UJ83 578 aa23.9■■□□□ 1.42
SMIM4-205ENST00000491607 EAPPQ56P03 285 aaPredicted RBP23.89■■□□□ 1.41
SMIM4-205ENST00000491607 LARGE2Q8N3Y3 721 aa23.89■■□□□ 1.41
SMIM4-205ENST00000491607 ABCC4O15439 1325 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 EIF6P56537 245 aaKnown RBP23.88■■□□□ 1.41
SMIM4-205ENST00000491607 IFFO2Q5TF58 517 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 LDHDQ86WU2 507 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 GPC2Q8N158 579 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 JMYQ8N9B5 988 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 PLBD2Q8NHP8 589 aa23.88■■□□□ 1.41
SMIM4-205ENST00000491607 SH3TC1Q8TE82 1336 aa23.87■■□□□ 1.41
SMIM4-205ENST00000491607 SCN4AP35499 1836 aa23.87■■□□□ 1.41
SMIM4-205ENST00000491607 CALD1Q05682 793 aaKnown RBP23.87■■□□□ 1.41
SMIM4-205ENST00000491607 ANKRD13DQ6ZTN6 518 aa23.87■■□□□ 1.41
SMIM4-205ENST00000491607 ATP6V0A2Q9Y487 856 aa23.87■■□□□ 1.41
SMIM4-205ENST00000491607 GJA3Q9Y6H8 435 aa23.87■■□□□ 1.41
SMIM4-205ENST00000491607 EPHX2P34913 555 aa23.86■■□□□ 1.41
SMIM4-205ENST00000491607 IFT57Q9NWB7 429 aa23.86■■□□□ 1.41
SMIM4-205ENST00000491607 HYPKQ9NX55 129 aa23.86■■□□□ 1.41
SMIM4-205ENST00000491607 CLEC11AQ9Y240 323 aa23.86■■□□□ 1.41
SMIM4-205ENST00000491607 COL4A5P29400 1685 aa23.86■■□□□ 1.41
SMIM4-205ENST00000491607 ZNF853P0CG23 659 aa23.85■■□□□ 1.41
SMIM4-205ENST00000491607 GNAI1P63096 354 aa23.85■■□□□ 1.41
SMIM4-205ENST00000491607 DDX46Q7L014 1031 aaKnown RBP23.85■■□□□ 1.41
SMIM4-205ENST00000491607 ATP5J2-PTCD1G3V325 749 aa23.84■■□□□ 1.41
SMIM4-205ENST00000491607 ELL2O00472 640 aaPredicted RBP23.84■■□□□ 1.41
SMIM4-205ENST00000491607 PPIP5K2O43314 1243 aa23.84■■□□□ 1.41
SMIM4-205ENST00000491607 BBOX1O75936 387 aa23.83■■□□□ 1.41
SMIM4-205ENST00000491607 AOC3Q16853 763 aa23.83■■□□□ 1.41
SMIM4-205ENST00000491607 PNMA8AQ86V59 439 aaPredicted RBP23.83■■□□□ 1.41
SMIM4-205ENST00000491607 NIM1KQ8IY84 436 aa23.83■■□□□ 1.41
SMIM4-205ENST00000491607 CREBZFQ9NS37 354 aa23.82■■□□□ 1.4
SMIM4-205ENST00000491607 LAMB2P55268 1798 aa23.82■■□□□ 1.4
SMIM4-205ENST00000491607 LMOD1P29536 600 aaPredicted RBP23.81■■□□□ 1.4
SMIM4-205ENST00000491607 DPP8Q6V1X1 898 aaPredicted RBP23.81■■□□□ 1.4
SMIM4-205ENST00000491607 SP8Q8IXZ3 490 aa23.81■■□□□ 1.4
SMIM4-205ENST00000491607 SUPT20HQ8NEM7 779 aa23.81■■□□□ 1.4
SMIM4-205ENST00000491607 FAM89AQ96GI7 184 aa23.81■■□□□ 1.4
SMIM4-205ENST00000491607 ISCA1Q9BUE6 129 aa23.81■■□□□ 1.4
SMIM4-205ENST00000491607 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
SMIM4-205ENST00000491607 GRAPQ13588 217 aa23.8■■□□□ 1.4
SMIM4-205ENST00000491607 RTL5Q5HYW3 569 aaPredicted RBP23.8■■□□□ 1.4
SMIM4-205ENST00000491607 RIC3Q7Z5B4 369 aa23.8■■□□□ 1.4
SMIM4-205ENST00000491607 GRAPLQ8TC17 118 aaPredicted RBP23.8■■□□□ 1.4
SMIM4-205ENST00000491607 CCDC184Q52MB2 194 aa23.79■■□□□ 1.4
SMIM4-205ENST00000491607 MPNDQ8N594 471 aa23.79■■□□□ 1.4
SMIM4-205ENST00000491607 PHAXQ9H814 394 aaKnown RBP23.79■■□□□ 1.4
SMIM4-205ENST00000491607 MKRN1Q9UHC7 482 aaKnown RBP23.79■■□□□ 1.4
SMIM4-205ENST00000491607 PASKQ96RG2 1323 aa23.79■■□□□ 1.4
SMIM4-205ENST00000491607 RTFDC1Q9BY42 306 aaPredicted RBP23.78■■□□□ 1.4
SMIM4-205ENST00000491607 VPS33BQ9H267 617 aa23.78■■□□□ 1.4
SMIM4-205ENST00000491607 MAP1SQ66K74 1059 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms