RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 RPGRQ92834 1020 aaKnown RBP17.59■□□□□ 0.41
CDK9-204ENST00000491521 ZC3H4Q9UPT8 1303 aaKnown RBP17.58■□□□□ 0.4
CDK9-204ENST00000491521 KLRG2A4D1S0 409 aaPredicted RBP17.58■□□□□ 0.4
CDK9-204ENST00000491521 CCDC93Q567U6 631 aa17.58■□□□□ 0.4
CDK9-204ENST00000491521 CFAP44Q96MT7 982 aa17.58■□□□□ 0.4
CDK9-204ENST00000491521 MBIPQ9NS73 344 aa17.58■□□□□ 0.4
CDK9-204ENST00000491521 DICER1Q9UPY3 1922 aaKnown RBP17.58■□□□□ 0.4
CDK9-204ENST00000491521 IL16Q14005 1332 aa17.57■□□□□ 0.4
CDK9-204ENST00000491521 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
CDK9-204ENST00000491521 E9PSI1 815 aa17.57■□□□□ 0.4
CDK9-204ENST00000491521 TCERG1O14776 1098 aaKnown RBP17.57■□□□□ 0.4
CDK9-204ENST00000491521 NTSR2O95665 410 aa17.57■□□□□ 0.4
CDK9-204ENST00000491521 PPP1R42Q7Z4L9 355 aa17.57■□□□□ 0.4
CDK9-204ENST00000491521 DDX21Q9NR30 783 aaKnown RBP eCLIP17.57■□□□□ 0.4
CDK9-204ENST00000491521 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
CDK9-204ENST00000491521 CENPBP07199 599 aaPredicted RBP17.56■□□□□ 0.4
CDK9-204ENST00000491521 ALDH1B1P30837 517 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 GNAI1P63096 354 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 SLFN5Q08AF3 891 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 PARP10Q53GL7 1025 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 DUSP27Q5VZP5 1158 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 C3orf67Q6ZVT6 689 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 C7orf43Q8WVR3 580 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 UTP14AQ9BVJ6 771 aaKnown RBP17.56■□□□□ 0.4
CDK9-204ENST00000491521 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
CDK9-204ENST00000491521 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
CDK9-204ENST00000491521 LTBP3Q9NS15 1303 aa17.55■□□□□ 0.4
CDK9-204ENST00000491521 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
CDK9-204ENST00000491521 RBM46Q8TBY0 533 aaKnown RBP17.55■□□□□ 0.4
CDK9-204ENST00000491521 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
CDK9-204ENST00000491521 IBTKQ9P2D0 1353 aaPredicted RBP17.54■□□□□ 0.4
CDK9-204ENST00000491521 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
CDK9-204ENST00000491521 RBM17Q96I25 401 aaKnown RBP17.54■□□□□ 0.4
CDK9-204ENST00000491521 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
CDK9-204ENST00000491521 VEGFAP15692 232 aaPredicted RBP17.53■□□□□ 0.4
CDK9-204ENST00000491521 FKBP4Q02790 459 aaKnown RBP eCLIP17.53■□□□□ 0.4
CDK9-204ENST00000491521 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
CDK9-204ENST00000491521 SLC51AQ86UW1 340 aa17.53■□□□□ 0.4
CDK9-204ENST00000491521 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
CDK9-204ENST00000491521 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
CDK9-204ENST00000491521 HOXB7P09629 217 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 ZNF853P0CG23 659 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 HCLS1P14317 486 aaPredicted RBP17.52■□□□□ 0.4
CDK9-204ENST00000491521 TCIRG1Q13488 830 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 NLRP10Q86W26 655 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 SYNE4Q8N205 404 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 TSR2Q969E8 191 aaKnown RBP17.52■□□□□ 0.4
CDK9-204ENST00000491521 NLRP3Q96P20 1036 aa17.52■□□□□ 0.4
CDK9-204ENST00000491521 TRMT112Q9UI30 125 aaKnown RBP17.52■□□□□ 0.4
CDK9-204ENST00000491521 PPEF1O14829 653 aaPredicted RBP17.51■□□□□ 0.39
CDK9-204ENST00000491521 DDNO94850 711 aaPredicted RBP17.51■□□□□ 0.39
CDK9-204ENST00000491521 APLP1P51693 650 aa17.51■□□□□ 0.39
CDK9-204ENST00000491521 RIC1Q4ADV7 1423 aa17.51■□□□□ 0.39
CDK9-204ENST00000491521 ATP5J2-PTCD1G3V325 749 aa17.5■□□□□ 0.39
CDK9-204ENST00000491521 HTRA3P83110 453 aa17.5■□□□□ 0.39
CDK9-204ENST00000491521 ANKRD13DQ6ZTN6 518 aa17.5■□□□□ 0.39
CDK9-204ENST00000491521 TRMT2AQ8IZ69 625 aaKnown RBP17.5■□□□□ 0.39
CDK9-204ENST00000491521 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
CDK9-204ENST00000491521 LAMB2P55268 1798 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 HOXA10P31260 410 aaPredicted RBP17.49■□□□□ 0.39
CDK9-204ENST00000491521 FSTL1Q12841 308 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 C8orf58Q8NAV2 365 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 SMC1BQ8NDV3 1235 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 PLBD2Q8NHP8 589 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 WDR90Q96KV7 1748 aa17.49■□□□□ 0.39
CDK9-204ENST00000491521 SH3TC1Q8TE82 1336 aa17.48■□□□□ 0.39
CDK9-204ENST00000491521 ZNF541Q9H0D2 1346 aa17.48■□□□□ 0.39
CDK9-204ENST00000491521 FANCIQ9NVI1 1328 aa17.48■□□□□ 0.39
CDK9-204ENST00000491521 POTECB2RU33 542 aa17.48■□□□□ 0.39
CDK9-204ENST00000491521 IARSP41252 1262 aaKnown RBP17.48■□□□□ 0.39
CDK9-204ENST00000491521 RTL5Q5HYW3 569 aaPredicted RBP17.48■□□□□ 0.39
CDK9-204ENST00000491521 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
CDK9-204ENST00000491521 ABCC4O15439 1325 aa17.47■□□□□ 0.39
CDK9-204ENST00000491521 EXOSC9Q06265 439 aaKnown RBP17.47■□□□□ 0.39
CDK9-204ENST00000491521 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
CDK9-204ENST00000491521 RIC3Q7Z5B4 369 aa17.47■□□□□ 0.39
CDK9-204ENST00000491521 TMX4Q9H1E5 349 aaPredicted RBP17.47■□□□□ 0.39
CDK9-204ENST00000491521 PHAXQ9H814 394 aaKnown RBP17.47■□□□□ 0.39
CDK9-204ENST00000491521 TAF1P21675 1872 aa17.46■□□□□ 0.39
CDK9-204ENST00000491521 FAM89AQ96GI7 184 aa17.46■□□□□ 0.39
CDK9-204ENST00000491521 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.38
CDK9-204ENST00000491521 CC2D2BQ6DHV5 1058 aa17.45■□□□□ 0.38
CDK9-204ENST00000491521 TSPYL6Q8N831 410 aa17.45■□□□□ 0.38
CDK9-204ENST00000491521 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CDK9-204ENST00000491521 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
CDK9-204ENST00000491521 LARGE2Q8N3Y3 721 aa17.44■□□□□ 0.38
CDK9-204ENST00000491521 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
CDK9-204ENST00000491521 MYD88Q99836 296 aa17.44■□□□□ 0.38
CDK9-204ENST00000491521 ISCA1Q9BUE6 129 aa17.44■□□□□ 0.38
CDK9-204ENST00000491521 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
CDK9-204ENST00000491521 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
CDK9-204ENST00000491521 POTEJP0CG39 1038 aa17.43■□□□□ 0.38
CDK9-204ENST00000491521 CCDC30Q5VVM6 783 aa17.43■□□□□ 0.38
CDK9-204ENST00000491521 GJA3Q9Y6H8 435 aa17.43■□□□□ 0.38
CDK9-204ENST00000491521 SNED1Q8TER0 1413 aa17.43■□□□□ 0.38
CDK9-204ENST00000491521 COL4A5P29400 1685 aa17.42■□□□□ 0.38
CDK9-204ENST00000491521 EAPPQ56P03 285 aaPredicted RBP17.42■□□□□ 0.38
CDK9-204ENST00000491521 ATP6V0A2Q9Y487 856 aa17.42■□□□□ 0.38
CDK9-204ENST00000491521 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms