RNA–Protein interactions for RNA: ENST00000491362.1

USP30-207, Transcript of ubiquitin specific peptidase 30, humanhuman

TSL 2

Gene USP30, Length 745 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-207ENST00000491362 KIF6Q6ZMV9 814 aa11.19□□□□□ -0.62
USP30-207ENST00000491362 ZNF34Q8IZ26 560 aa11.19□□□□□ -0.62
USP30-207ENST00000491362 JMYQ8N9B5 988 aa11.19□□□□□ -0.62
USP30-207ENST00000491362 FKBP4Q02790 459 aaKnown RBP eCLIP11.18□□□□□ -0.62
USP30-207ENST00000491362 PDIA6Q15084 440 aa11.18□□□□□ -0.62
USP30-207ENST00000491362 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
USP30-207ENST00000491362 KLRG1Q96E93 195 aa11.18□□□□□ -0.62
USP30-207ENST00000491362 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
USP30-207ENST00000491362 THUMPD2Q9BTF0 503 aaKnown RBP11.18□□□□□ -0.62
USP30-207ENST00000491362 TSPYL4Q9UJ04 414 aa11.18□□□□□ -0.62
USP30-207ENST00000491362 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
USP30-207ENST00000491362 RNF123Q5XPI4 1314 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 CHL1O00533 1208 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 PARP10Q53GL7 1025 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 SLC10A5Q5PT55 438 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 IFFO2Q5TF58 517 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 TTLL7Q6ZT98 887 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 PSMD1Q99460 953 aa11.17□□□□□ -0.62
USP30-207ENST00000491362 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
USP30-207ENST00000491362 HOXB7P09629 217 aa11.16□□□□□ -0.62
USP30-207ENST00000491362 GTF2E1P29083 439 aaPredicted RBP11.16□□□□□ -0.62
USP30-207ENST00000491362 RUNDC1Q96C34 613 aa11.16□□□□□ -0.62
USP30-207ENST00000491362 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
USP30-207ENST00000491362 CCDC88AQ3V6T2 1871 aa11.16□□□□□ -0.62
USP30-207ENST00000491362 UBN2Q6ZU65 1347 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 NUP98P52948 1817 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 IQCA1LA6NCM1 817 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 NTSR2O95665 410 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 MYL6BP14649 208 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 DDX10Q13206 875 aaKnown RBP11.15□□□□□ -0.62
USP30-207ENST00000491362 SUSD4Q5VX71 490 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 PPP1R42Q7Z4L9 355 aa11.15□□□□□ -0.62
USP30-207ENST00000491362 ABCC12Q96J65 1359 aa11.15□□□□□ -0.63
USP30-207ENST00000491362 FZD9O00144 591 aa11.14□□□□□ -0.63
USP30-207ENST00000491362 DDNO94850 711 aaPredicted RBP11.14□□□□□ -0.63
USP30-207ENST00000491362 HSP90AB3PQ58FF7 597 aa11.14□□□□□ -0.63
USP30-207ENST00000491362 VPS33BQ9H267 617 aa11.14□□□□□ -0.63
USP30-207ENST00000491362 DDX21Q9NR30 783 aaKnown RBP eCLIP11.14□□□□□ -0.63
USP30-207ENST00000491362 TRIM35Q9UPQ4 493 aa11.14□□□□□ -0.63
USP30-207ENST00000491362 IARSP41252 1262 aaKnown RBP11.13□□□□□ -0.63
USP30-207ENST00000491362 CHADLQ6NUI6 762 aa11.13□□□□□ -0.63
USP30-207ENST00000491362 NUTM1Q86Y26 1132 aa11.13□□□□□ -0.63
USP30-207ENST00000491362 NGEFQ8N5V2 710 aa11.13□□□□□ -0.63
USP30-207ENST00000491362 RBM17Q96I25 401 aaKnown RBP11.13□□□□□ -0.63
USP30-207ENST00000491362 ZBTB3Q9H5J0 574 aa11.13□□□□□ -0.63
USP30-207ENST00000491362 SCN4AP35499 1836 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 FAM177BA6PVY3 158 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 WDR43Q15061 677 aaKnown RBP eCLIP11.12□□□□□ -0.63
USP30-207ENST00000491362 LDHDQ86WU2 507 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 SYNE4Q8N205 404 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 BBXQ8WY36 941 aaPredicted RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 RPGRQ92834 1020 aaKnown RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 CFAP44Q96MT7 982 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 UTP14AQ9BVJ6 771 aaKnown RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 ZBTB47Q9UFB7 747 aaPredicted RBP11.12□□□□□ -0.63
USP30-207ENST00000491362 ADAMTS8Q9UP79 889 aa11.12□□□□□ -0.63
USP30-207ENST00000491362 EIF2S2P20042 333 aaKnown RBP11.11□□□□□ -0.63
USP30-207ENST00000491362 GPTP24298 496 aa11.11□□□□□ -0.63
USP30-207ENST00000491362 TCIRG1Q13488 830 aa11.11□□□□□ -0.63
USP30-207ENST00000491362 PROSER3Q2NL68 480 aa11.11□□□□□ -0.63
USP30-207ENST00000491362 COPS6Q7L5N1 327 aa11.11□□□□□ -0.63
USP30-207ENST00000491362 GPC2Q8N158 579 aa11.11□□□□□ -0.63
USP30-207ENST00000491362 TAF1DQ9H5J8 278 aaPredicted RBP11.11□□□□□ -0.63
USP30-207ENST00000491362 ZNF277Q9NRM2 450 aaPredicted RBP11.11□□□□□ -0.63
USP30-207ENST00000491362 CACNA1SQ13698 1873 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 BBOX1O75936 387 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 HTRA3P83110 453 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 PNMA8AQ86V59 439 aaPredicted RBP11.1□□□□□ -0.63
USP30-207ENST00000491362 NLRP10Q86W26 655 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 JDP2Q8WYK2 163 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 RTFDC1Q9BY42 306 aaPredicted RBP11.1□□□□□ -0.63
USP30-207ENST00000491362 CREBZFQ9NS37 354 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 DBF4Q9UBU7 674 aaPredicted RBP11.1□□□□□ -0.63
USP30-207ENST00000491362 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 ATP6V0A2Q9Y487 856 aa11.1□□□□□ -0.63
USP30-207ENST00000491362 PASKQ96RG2 1323 aa11.09□□□□□ -0.63
USP30-207ENST00000491362 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
USP30-207ENST00000491362 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
USP30-207ENST00000491362 TRIM28Q13263 835 aaKnown RBP11.09□□□□□ -0.63
USP30-207ENST00000491362 TMC4Q7Z404 712 aa11.09□□□□□ -0.63
USP30-207ENST00000491362 PLBD2Q8NHP8 589 aa11.09□□□□□ -0.63
USP30-207ENST00000491362 XAGE3Q8WTP9 111 aa11.09□□□□□ -0.63
USP30-207ENST00000491362 ADAMTSL1Q8N6G6 1762 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 ITGBL1O95965 494 aaPredicted RBP11.08□□□□□ -0.64
USP30-207ENST00000491362 CALD1Q05682 793 aaKnown RBP11.08□□□□□ -0.64
USP30-207ENST00000491362 NEUROD2Q15784 382 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 C3orf67Q6ZVT6 689 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 SP8Q8IXZ3 490 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 CCDC146Q8IYE0 955 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 CHMP4AQ9BY43 222 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 HYPKQ9NX55 129 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 CIZ1Q9ULV3 898 aaPredicted RBP11.08□□□□□ -0.64
USP30-207ENST00000491362 ANKRD36CQ5JPF3 1778 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 SH3TC1Q8TE82 1336 aa11.08□□□□□ -0.64
USP30-207ENST00000491362 ANXA1P04083 346 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms