RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 COL4A5P29400 1685 aa27.41■■□□□ 1.98
CLIP2-208ENST00000491075 GRIPAP1Q4V328 841 aa27.41■■□□□ 1.98
CLIP2-208ENST00000491075 KIF6Q6ZMV9 814 aa27.41■■□□□ 1.98
CLIP2-208ENST00000491075 NUTM1Q86Y26 1132 aa27.41■■□□□ 1.98
CLIP2-208ENST00000491075 RPGRQ92834 1020 aaKnown RBP27.41■■□□□ 1.98
CLIP2-208ENST00000491075 NEFMP07197 916 aa27.4■■□□□ 1.98
CLIP2-208ENST00000491075 EIF6P56537 245 aaKnown RBP27.4■■□□□ 1.98
CLIP2-208ENST00000491075 WBP1LQ9NX94 342 aa27.4■■□□□ 1.98
CLIP2-208ENST00000491075 LTBP1Q14766 1721 aa27.4■■□□□ 1.98
CLIP2-208ENST00000491075 HOXA10P31260 410 aaPredicted RBP27.39■■□□□ 1.98
CLIP2-208ENST00000491075 DEFB115Q30KQ5 88 aa27.39■■□□□ 1.98
CLIP2-208ENST00000491075 NGEFQ8N5V2 710 aa27.39■■□□□ 1.98
CLIP2-208ENST00000491075 LMOD1P29536 600 aaPredicted RBP27.37■■□□□ 1.97
CLIP2-208ENST00000491075 GJA3Q9Y6H8 435 aa27.37■■□□□ 1.97
CLIP2-208ENST00000491075 THSD7BQ9C0I4 1608 aa27.37■■□□□ 1.97
CLIP2-208ENST00000491075 TRPM7Q96QT4 1865 aa27.36■■□□□ 1.97
CLIP2-208ENST00000491075 TTLL7Q6ZT98 887 aa27.36■■□□□ 1.97
CLIP2-208ENST00000491075 RRP7AQ9Y3A4 280 aaKnown RBP27.36■■□□□ 1.97
CLIP2-208ENST00000491075 UBN2Q6ZU65 1347 aa27.36■■□□□ 1.97
CLIP2-208ENST00000491075 GPTP24298 496 aa27.35■■□□□ 1.97
CLIP2-208ENST00000491075 EIF4A1P60842 406 aaKnown RBP27.35■■□□□ 1.97
CLIP2-208ENST00000491075 ABT1Q9ULW3 272 aaKnown RBP27.35■■□□□ 1.97
CLIP2-208ENST00000491075 LBX1P52954 281 aa27.34■■□□□ 1.97
CLIP2-208ENST00000491075 LARGE2Q8N3Y3 721 aa27.34■■□□□ 1.97
CLIP2-208ENST00000491075 RBM17Q96I25 401 aaKnown RBP27.34■■□□□ 1.97
CLIP2-208ENST00000491075 CRAMP1Q96RY5 1269 aa27.34■■□□□ 1.97
CLIP2-208ENST00000491075 ZBTB3Q9H5J0 574 aa27.34■■□□□ 1.97
CLIP2-208ENST00000491075 DDX21Q9NR30 783 aaKnown RBP eCLIP27.34■■□□□ 1.97
CLIP2-208ENST00000491075 WDR33Q9C0J8 1336 aaKnown RBP27.34■■□□□ 1.97
CLIP2-208ENST00000491075 MYL6BP14649 208 aa27.33■■□□□ 1.97
CLIP2-208ENST00000491075 MAP2K1Q02750 393 aaPredicted RBP27.33■■□□□ 1.97
CLIP2-208ENST00000491075 PPEF1O14829 653 aaPredicted RBP27.32■■□□□ 1.96
CLIP2-208ENST00000491075 SCNN1DP51172 638 aa27.32■■□□□ 1.96
CLIP2-208ENST00000491075 SUSD4Q5VX71 490 aa27.32■■□□□ 1.96
CLIP2-208ENST00000491075 ERBB4Q15303 1308 aa27.32■■□□□ 1.96
CLIP2-208ENST00000491075 NTSR2O95665 410 aa27.31■■□□□ 1.96
CLIP2-208ENST00000491075 ZNF34Q8IZ26 560 aa27.31■■□□□ 1.96
CLIP2-208ENST00000491075 HSPA8P11142 646 aaKnown RBP27.3■■□□□ 1.96
CLIP2-208ENST00000491075 GIGYF2Q6Y7W6 1299 aaKnown RBP27.3■■□□□ 1.96
CLIP2-208ENST00000491075 EPS15P42566 896 aa27.29■■□□□ 1.96
CLIP2-208ENST00000491075 NFE2L2Q16236 605 aa27.29■■□□□ 1.96
CLIP2-208ENST00000491075 USP50Q70EL3 339 aaPredicted RBP27.29■■□□□ 1.96
CLIP2-208ENST00000491075 PPP1R42Q7Z4L9 355 aa27.29■■□□□ 1.96
CLIP2-208ENST00000491075 NIM1KQ8IY84 436 aa27.29■■□□□ 1.96
CLIP2-208ENST00000491075 ANKRD36CQ5JPF3 1778 aa27.28■■□□□ 1.96
CLIP2-208ENST00000491075 PARP10Q53GL7 1025 aa27.28■■□□□ 1.96
CLIP2-208ENST00000491075 PLEKHF1Q96S99 279 aa27.28■■□□□ 1.96
CLIP2-208ENST00000491075 TMX4Q9H1E5 349 aaPredicted RBP27.28■■□□□ 1.96
CLIP2-208ENST00000491075 THUMPD2Q9BTF0 503 aaKnown RBP27.27■■□□□ 1.96
CLIP2-208ENST00000491075 VPS33BQ9H267 617 aa27.27■■□□□ 1.96
CLIP2-208ENST00000491075 LAMB2P55268 1798 aa27.27■■□□□ 1.96
CLIP2-208ENST00000491075 PPIP5K2O43314 1243 aa27.26■■□□□ 1.95
CLIP2-208ENST00000491075 ECE1P42892 770 aa27.26■■□□□ 1.95
CLIP2-208ENST00000491075 NLRP3Q96P20 1036 aa27.26■■□□□ 1.95
CLIP2-208ENST00000491075 TCERG1O14776 1098 aaKnown RBP27.25■■□□□ 1.95
CLIP2-208ENST00000491075 C3orf67Q6ZVT6 689 aa27.25■■□□□ 1.95
CLIP2-208ENST00000491075 SLC51AQ86UW1 340 aa27.25■■□□□ 1.95
CLIP2-208ENST00000491075 CAPNS2Q96L46 248 aa27.25■■□□□ 1.95
CLIP2-208ENST00000491075 MAPK8IP3Q9UPT6 1336 aa27.24■■□□□ 1.95
CLIP2-208ENST00000491075 PNNQ9H307 717 aaKnown RBP27.24■■□□□ 1.95
CLIP2-208ENST00000491075 ATP6V0A2Q9Y487 856 aa27.24■■□□□ 1.95
CLIP2-208ENST00000491075 AOC3Q16853 763 aa27.23■■□□□ 1.95
CLIP2-208ENST00000491075 PAXIP1Q6ZW49 1069 aaPredicted RBP27.23■■□□□ 1.95
CLIP2-208ENST00000491075 FMR1Q06787 632 aaKnown RBP eCLIP27.22■■□□□ 1.95
CLIP2-208ENST00000491075 SUPT20HQ8NEM7 779 aa27.22■■□□□ 1.95
CLIP2-208ENST00000491075 BEGAINQ9BUH8 593 aa27.22■■□□□ 1.95
CLIP2-208ENST00000491075 ADARB2Q9NS39 739 aaKnown RBP27.22■■□□□ 1.95
CLIP2-208ENST00000491075 GPRC5DQ9NZD1 345 aa27.22■■□□□ 1.95
CLIP2-208ENST00000491075 SLC10A5Q5PT55 438 aa27.21■■□□□ 1.95
CLIP2-208ENST00000491075 ABHD8Q96I13 439 aa27.21■■□□□ 1.95
CLIP2-208ENST00000491075 UTP14AQ9BVJ6 771 aaKnown RBP27.21■■□□□ 1.95
CLIP2-208ENST00000491075 TSPYL4Q9UJ04 414 aa27.21■■□□□ 1.95
CLIP2-208ENST00000491075 TLL2Q9Y6L7 1015 aa27.21■■□□□ 1.95
CLIP2-208ENST00000491075 ABCC4O15439 1325 aa27.2■■□□□ 1.95
CLIP2-208ENST00000491075 TRAF5O00463 557 aa27.2■■□□□ 1.94
CLIP2-208ENST00000491075 CST9Q5W186 159 aa27.2■■□□□ 1.94
CLIP2-208ENST00000491075 CYP4F22Q6NT55 531 aa27.2■■□□□ 1.94
CLIP2-208ENST00000491075 LRP10Q7Z4F1 713 aa27.2■■□□□ 1.94
CLIP2-208ENST00000491075 GPR101Q96P66 508 aaPredicted RBP27.2■■□□□ 1.94
CLIP2-208ENST00000491075 RTFDC1Q9BY42 306 aaPredicted RBP27.2■■□□□ 1.94
CLIP2-208ENST00000491075 ZNRF3Q9ULT6 936 aa27.2■■□□□ 1.94
CLIP2-208ENST00000491075 CDHR2Q9BYE9 1310 aa27.18■■□□□ 1.94
CLIP2-208ENST00000491075 CXCL9Q07325 125 aa27.18■■□□□ 1.94
CLIP2-208ENST00000491075 GRM1Q13255 1194 aa27.17■■□□□ 1.94
CLIP2-208ENST00000491075 PDIA6Q15084 440 aa27.17■■□□□ 1.94
CLIP2-208ENST00000491075 BBOX1O75936 387 aa27.16■■□□□ 1.94
CLIP2-208ENST00000491075 EIF2S2P20042 333 aaKnown RBP27.16■■□□□ 1.94
CLIP2-208ENST00000491075 DPP8Q6V1X1 898 aaPredicted RBP27.16■■□□□ 1.94
CLIP2-208ENST00000491075 MAP2K2P36507 400 aa27.15■■□□□ 1.94
CLIP2-208ENST00000491075 GMPSP49915 693 aaPredicted RBP27.15■■□□□ 1.94
CLIP2-208ENST00000491075 HSP90AB3PQ58FF7 597 aa27.15■■□□□ 1.94
CLIP2-208ENST00000491075 SP8Q8IXZ3 490 aa27.15■■□□□ 1.94
CLIP2-208ENST00000491075 BABAM1Q9NWV8 329 aa27.15■■□□□ 1.94
CLIP2-208ENST00000491075 LRRC37AA6NMS7 1700 aa27.14■■□□□ 1.94
CLIP2-208ENST00000491075 PROSER3Q2NL68 480 aa27.14■■□□□ 1.94
CLIP2-208ENST00000491075 KIAA2012Q0VF49 1180 aa27.13■■□□□ 1.93
CLIP2-208ENST00000491075 CIAPIN1Q6FI81 312 aa27.13■■□□□ 1.93
CLIP2-208ENST00000491075 SAPCD2Q86UD0 394 aa27.13■■□□□ 1.93
CLIP2-208ENST00000491075 MPNDQ8N594 471 aa27.13■■□□□ 1.93
CLIP2-208ENST00000491075 CELF2O95319 508 aaKnown RBP27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms