RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 IFT57Q9NWB7 429 aa17.65■□□□□ 0.42
TRAIP-211ENST00000491060 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
TRAIP-211ENST00000491060 HCLS1P14317 486 aaPredicted RBP17.64■□□□□ 0.41
TRAIP-211ENST00000491060 PPP1R42Q7Z4L9 355 aa17.64■□□□□ 0.41
TRAIP-211ENST00000491060 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
TRAIP-211ENST00000491060 ZNF277Q9NRM2 450 aaPredicted RBP17.63■□□□□ 0.41
TRAIP-211ENST00000491060 KDM2BQ8NHM5 1336 aa17.63■□□□□ 0.41
TRAIP-211ENST00000491060 ZNF853P0CG23 659 aa17.62■□□□□ 0.41
TRAIP-211ENST00000491060 CALD1Q05682 793 aaKnown RBP17.62■□□□□ 0.41
TRAIP-211ENST00000491060 CCDC93Q567U6 631 aa17.62■□□□□ 0.41
TRAIP-211ENST00000491060 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
TRAIP-211ENST00000491060 DBF4Q9UBU7 674 aaPredicted RBP17.62■□□□□ 0.41
TRAIP-211ENST00000491060 TRMT112Q9UI30 125 aaKnown RBP17.62■□□□□ 0.41
TRAIP-211ENST00000491060 NLRP10Q86W26 655 aa17.61■□□□□ 0.41
TRAIP-211ENST00000491060 JARID2Q92833 1246 aaPredicted RBP17.61■□□□□ 0.41
TRAIP-211ENST00000491060 TCIRG1Q13488 830 aa17.6■□□□□ 0.41
TRAIP-211ENST00000491060 PARP10Q53GL7 1025 aa17.6■□□□□ 0.41
TRAIP-211ENST00000491060 ANKRD13DQ6ZTN6 518 aa17.6■□□□□ 0.41
TRAIP-211ENST00000491060 RIC3Q7Z5B4 369 aa17.6■□□□□ 0.41
TRAIP-211ENST00000491060 RBM17Q96I25 401 aaKnown RBP17.6■□□□□ 0.41
TRAIP-211ENST00000491060 DDX60Q8IY21 1712 aaKnown RBP17.59■□□□□ 0.41
TRAIP-211ENST00000491060 RGL2O15211 777 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 ALDH1B1P30837 517 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 NLRP3Q96P20 1036 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 MYD88Q99836 296 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 HYPKQ9NX55 129 aa17.59■□□□□ 0.41
TRAIP-211ENST00000491060 KLRG2A4D1S0 409 aaPredicted RBP17.58■□□□□ 0.4
TRAIP-211ENST00000491060 PPEF1O14829 653 aaPredicted RBP17.58■□□□□ 0.4
TRAIP-211ENST00000491060 PLBD2Q8NHP8 589 aa17.58■□□□□ 0.4
TRAIP-211ENST00000491060 C7orf43Q8WVR3 580 aa17.58■□□□□ 0.4
TRAIP-211ENST00000491060 FAM89AQ96GI7 184 aa17.58■□□□□ 0.4
TRAIP-211ENST00000491060 GLTPD2A6NH11 291 aa17.57■□□□□ 0.4
TRAIP-211ENST00000491060 DDNO94850 711 aaPredicted RBP17.57■□□□□ 0.4
TRAIP-211ENST00000491060 HOXB7P09629 217 aa17.57■□□□□ 0.4
TRAIP-211ENST00000491060 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
TRAIP-211ENST00000491060 SOGA3Q5TF21 947 aa17.57■□□□□ 0.4
TRAIP-211ENST00000491060 IBTKQ9P2D0 1353 aaPredicted RBP17.56■□□□□ 0.4
TRAIP-211ENST00000491060 TOMM70O94826 608 aa17.56■□□□□ 0.4
TRAIP-211ENST00000491060 HTRA3P83110 453 aa17.56■□□□□ 0.4
TRAIP-211ENST00000491060 FKBP4Q02790 459 aaKnown RBP eCLIP17.56■□□□□ 0.4
TRAIP-211ENST00000491060 CRY2Q49AN0 593 aa17.56■□□□□ 0.4
TRAIP-211ENST00000491060 ABCC4O15439 1325 aa17.55■□□□□ 0.4
TRAIP-211ENST00000491060 SH3TC1Q8TE82 1336 aa17.55■□□□□ 0.4
TRAIP-211ENST00000491060 ZNF541Q9H0D2 1346 aa17.55■□□□□ 0.4
TRAIP-211ENST00000491060 HSPA6P17066 643 aa17.55■□□□□ 0.4
TRAIP-211ENST00000491060 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
TRAIP-211ENST00000491060 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
TRAIP-211ENST00000491060 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
TRAIP-211ENST00000491060 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
TRAIP-211ENST00000491060 LTBP3Q9NS15 1303 aa17.53■□□□□ 0.4
TRAIP-211ENST00000491060 IARSP41252 1262 aaKnown RBP17.53■□□□□ 0.4
TRAIP-211ENST00000491060 G2E3Q7L622 706 aa17.53■□□□□ 0.4
TRAIP-211ENST00000491060 RTKN2Q8IZC4 609 aa17.53■□□□□ 0.4
TRAIP-211ENST00000491060 ISCA1Q9BUE6 129 aa17.53■□□□□ 0.4
TRAIP-211ENST00000491060 GJA3Q9Y6H8 435 aa17.53■□□□□ 0.4
TRAIP-211ENST00000491060 FANCIQ9NVI1 1328 aa17.52■□□□□ 0.4
TRAIP-211ENST00000491060 DDX46Q7L014 1031 aaKnown RBP17.52■□□□□ 0.4
TRAIP-211ENST00000491060 CRAMP1Q96RY5 1269 aa17.52■□□□□ 0.4
TRAIP-211ENST00000491060 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
TRAIP-211ENST00000491060 MAP3K2Q9Y2U5 619 aa17.52■□□□□ 0.4
TRAIP-211ENST00000491060 COL4A1P02462 1669 aa17.52■□□□□ 0.39
TRAIP-211ENST00000491060 SPEF2Q9C093 1822 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 POTECB2RU33 542 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 VEGFAP15692 232 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-211ENST00000491060 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-211ENST00000491060 EXOSC9Q06265 439 aaKnown RBP17.51■□□□□ 0.39
TRAIP-211ENST00000491060 RIC1Q4ADV7 1423 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 SLC10A5Q5PT55 438 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 LARGE2Q8N3Y3 721 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 WDR90Q96KV7 1748 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 TMX4Q9H1E5 349 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-211ENST00000491060 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
TRAIP-211ENST00000491060 COL4A5P29400 1685 aa17.51■□□□□ 0.39
TRAIP-211ENST00000491060 ZC3H4Q9UPT8 1303 aaKnown RBP17.5■□□□□ 0.39
TRAIP-211ENST00000491060 IRS4O14654 1257 aaPredicted RBP17.5■□□□□ 0.39
TRAIP-211ENST00000491060 POTEIP0CG38 1075 aa17.5■□□□□ 0.39
TRAIP-211ENST00000491060 POTEJP0CG39 1038 aa17.5■□□□□ 0.39
TRAIP-211ENST00000491060 CCDC27Q2M243 656 aa17.5■□□□□ 0.39
TRAIP-211ENST00000491060 RBM46Q8TBY0 533 aaKnown RBP17.5■□□□□ 0.39
TRAIP-211ENST00000491060 SLC4A2P04920 1241 aa17.49■□□□□ 0.39
TRAIP-211ENST00000491060 AOC3Q16853 763 aa17.49■□□□□ 0.39
TRAIP-211ENST00000491060 EAPPQ56P03 285 aaPredicted RBP17.49■□□□□ 0.39
TRAIP-211ENST00000491060 PI4KAP2A4QPH2 592 aa17.48■□□□□ 0.39
TRAIP-211ENST00000491060 PPIP5K2O43314 1243 aa17.48■□□□□ 0.39
TRAIP-211ENST00000491060 DDX58O95786 925 aaKnown RBP17.48■□□□□ 0.39
TRAIP-211ENST00000491060 PI4KAP1Q8N8J0 262 aa17.48■□□□□ 0.39
TRAIP-211ENST00000491060 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
TRAIP-211ENST00000491060 CELF1Q92879 486 aaKnown RBP17.48■□□□□ 0.39
TRAIP-211ENST00000491060 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
TRAIP-211ENST00000491060 GRAPQ13588 217 aa17.47■□□□□ 0.39
TRAIP-211ENST00000491060 CWF19L2Q2TBE0 894 aaKnown RBP17.47■□□□□ 0.39
TRAIP-211ENST00000491060 DPP8Q6V1X1 898 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-211ENST00000491060 SMC1BQ8NDV3 1235 aa17.47■□□□□ 0.39
TRAIP-211ENST00000491060 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-211ENST00000491060 GPR101Q96P66 508 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-211ENST00000491060 CWC25Q9NXE8 425 aaPredicted RBP17.47■□□□□ 0.39
TRAIP-211ENST00000491060 CLEC11AQ9Y240 323 aa17.47■□□□□ 0.39
TRAIP-211ENST00000491060 ATP6V0A2Q9Y487 856 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms