RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 ZNF511Q8NB15 262 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 EHBP1Q8NDI1 1231 aa6.59□□□□□ -1.35
EPCAM-206ENST00000490733 NGDNQ8NEJ9 315 aaKnown RBP6.59□□□□□ -1.35
EPCAM-206ENST00000490733 HELBQ8NG08 1087 aaPredicted RBP6.59□□□□□ -1.35
EPCAM-206ENST00000490733 DDX17Q92841 729 aaKnown RBP6.59□□□□□ -1.35
EPCAM-206ENST00000490733 PXDNQ92626 1479 aa6.59□□□□□ -1.36
EPCAM-206ENST00000490733 FBLN1P23142 703 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 BRPF1P55201 1214 aaPredicted RBP6.58□□□□□ -1.36
EPCAM-206ENST00000490733 XPCQ01831 940 aaPredicted RBP6.58□□□□□ -1.36
EPCAM-206ENST00000490733 BRINP3Q76B58 766 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 SLAIN2Q9P270 581 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 CRYBG1Q9Y4K1 1723 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 SHPRHQ149N8 1683 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 ROBO1Q9Y6N7 1651 aa6.58□□□□□ -1.36
EPCAM-206ENST00000490733 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 TTC21AQ8NDW8 1320 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 PEAK1Q9H792 1746 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 CTDSPL2Q05D32 466 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 MORC1Q86VD1 984 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 NLRP13Q86W25 1043 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 DACH1Q9UI36 760 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 GTF3C3Q9Y5Q9 886 aa6.57□□□□□ -1.36
EPCAM-206ENST00000490733 BRD4O60885 1362 aaPredicted RBP6.57□□□□□ -1.36
EPCAM-206ENST00000490733 COL3A1P02461 1466 aaPredicted RBP6.56□□□□□ -1.36
EPCAM-206ENST00000490733 ALDH1A1P00352 501 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 TNNT2P45379 298 aaPredicted RBP6.56□□□□□ -1.36
EPCAM-206ENST00000490733 PSME1Q06323 249 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 PPP2R2DQ66LE6 453 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 KRT28Q7Z3Y7 464 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 IL27Q8NEV9 243 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 SLC16A10Q8TF71 515 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 HPS1Q92902 700 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 LTN1O94822 1766 aa6.56□□□□□ -1.36
EPCAM-206ENST00000490733 MED1Q15648 1581 aaPredicted RBP6.56□□□□□ -1.36
EPCAM-206ENST00000490733 NFAT5O94916 1531 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 PHRF1Q9P1Y6 1649 aaKnown RBP6.55□□□□□ -1.36
EPCAM-206ENST00000490733 AXIN1O15169 862 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
EPCAM-206ENST00000490733 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 ERICH6Q7L0X2 663 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 PNISRQ8TF01 805 aaKnown RBP6.55□□□□□ -1.36
EPCAM-206ENST00000490733 FOXJ1Q92949 421 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 MRS2Q9HD23 443 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 TLL2Q9Y6L7 1015 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 SMG6Q86US8 1419 aaKnown RBP6.55□□□□□ -1.36
EPCAM-206ENST00000490733 ABCA3Q99758 1704 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 AATKQ6ZMQ8 1374 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 SLIT3O75094 1523 aa6.55□□□□□ -1.36
EPCAM-206ENST00000490733 AHDC1Q5TGY3 1603 aaPredicted RBP6.54□□□□□ -1.36
EPCAM-206ENST00000490733 IQSEC2Q5JU85 1478 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 SOS2Q07890 1332 aaPredicted RBP6.54□□□□□ -1.36
EPCAM-206ENST00000490733 NPHP3Q7Z494 1330 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 VARSP26640 1264 aaKnown RBP6.54□□□□□ -1.36
EPCAM-206ENST00000490733 SMCPP49901 116 aaPredicted RBP6.54□□□□□ -1.36
EPCAM-206ENST00000490733 MTHFSP49914 203 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 KCNMA1Q12791 1236 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 CTC1Q2NKJ3 1217 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 HOMEZQ8IX15 550 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 ABTB2Q8N961 1025 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 COG3Q96JB2 828 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 POLKQ9UBT6 870 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 PNPLA6Q8IY17 1366 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 RGPD5Q99666 1765 aa6.54□□□□□ -1.36
EPCAM-206ENST00000490733 USP19O94966 1318 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 SPATA31A3Q5VYP0 1347 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 TNS3Q68CZ2 1445 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 RRS1Q15050 365 aaKnown RBP6.53□□□□□ -1.36
EPCAM-206ENST00000490733 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 EMILIN1Q9Y6C2 1016 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 COL18A1P39060 1754 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 INSRP06213 1382 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 COL16A1Q07092 1604 aaPredicted RBP6.53□□□□□ -1.36
EPCAM-206ENST00000490733 PHLPP1O60346 1717 aa6.53□□□□□ -1.36
EPCAM-206ENST00000490733 CDK12Q9NYV4 1490 aaPredicted RBP6.53□□□□□ -1.36
EPCAM-206ENST00000490733 MAP3K19Q56UN5 1328 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 AP1G2O75843 785 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 TMEM151AQ8N4L1 468 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 GOPCQ9HD26 462 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 RGPD1P0DJD0 1748 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 RGPD2P0DJD1 1756 aa6.52□□□□□ -1.37
EPCAM-206ENST00000490733 COL22A1Q8NFW1 1626 aaPredicted RBP6.51□□□□□ -1.37
EPCAM-206ENST00000490733 RFC5P40937 340 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 AGERQ15109 404 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 FAM9BQ8IZU0 186 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 MPNDQ8N594 471 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 ARMC2Q8NEN0 867 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 WASF2Q9Y6W5 498 aa6.51□□□□□ -1.37
EPCAM-206ENST00000490733 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
EPCAM-206ENST00000490733 ARHGEF10O15013 1369 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 UBAP1LF5GYI3 381 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 TOM1O60784 492 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 GCP02774 474 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 GMPRP36959 345 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 PIP4K2BP78356 416 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 NR6A1Q15406 480 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 SH3BP5LQ7L8J4 393 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 SH3RF1Q7Z6J0 888 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 BPHLQ86WA6 291 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms