RNA–Protein interactions for RNA: ENST00000490132.1

COL9A2-209, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-209ENST00000490132 C3orf67Q6ZVT6 689 aa23.84■■□□□ 1.41
COL9A2-209ENST00000490132 PPP1R42Q7Z4L9 355 aa23.84■■□□□ 1.41
COL9A2-209ENST00000490132 SNED1Q8TER0 1413 aa23.83■■□□□ 1.4
COL9A2-209ENST00000490132 ALDH1B1P30837 517 aa23.82■■□□□ 1.4
COL9A2-209ENST00000490132 GNAI1P63096 354 aa23.82■■□□□ 1.4
COL9A2-209ENST00000490132 CALD1Q05682 793 aaKnown RBP23.82■■□□□ 1.4
COL9A2-209ENST00000490132 UTP14AQ9BVJ6 771 aaKnown RBP23.82■■□□□ 1.4
COL9A2-209ENST00000490132 WDR90Q96KV7 1748 aa23.81■■□□□ 1.4
COL9A2-209ENST00000490132 HOXA10P31260 410 aaPredicted RBP23.81■■□□□ 1.4
COL9A2-209ENST00000490132 HSP90AB3PQ58FF7 597 aa23.81■■□□□ 1.4
COL9A2-209ENST00000490132 RBM46Q8TBY0 533 aaKnown RBP23.81■■□□□ 1.4
COL9A2-209ENST00000490132 DBF4Q9UBU7 674 aaPredicted RBP23.81■■□□□ 1.4
COL9A2-209ENST00000490132 ANP32CO43423 234 aa23.8■■□□□ 1.4
COL9A2-209ENST00000490132 TCIRG1Q13488 830 aa23.8■■□□□ 1.4
COL9A2-209ENST00000490132 NLRP10Q86W26 655 aa23.8■■□□□ 1.4
COL9A2-209ENST00000490132 C16orf71Q8IYS4 520 aaPredicted RBP23.8■■□□□ 1.4
COL9A2-209ENST00000490132 RPGRQ92834 1020 aaKnown RBP23.8■■□□□ 1.4
COL9A2-209ENST00000490132 MRS2Q9HD23 443 aa23.8■■□□□ 1.4
COL9A2-209ENST00000490132 FKBP4Q02790 459 aaKnown RBP eCLIP23.79■■□□□ 1.4
COL9A2-209ENST00000490132 SLC51AQ86UW1 340 aa23.79■■□□□ 1.4
COL9A2-209ENST00000490132 ELL2O00472 640 aaPredicted RBP23.78■■□□□ 1.4
COL9A2-209ENST00000490132 SLC10A5Q5PT55 438 aa23.78■■□□□ 1.4
COL9A2-209ENST00000490132 PLBD2Q8NHP8 589 aa23.78■■□□□ 1.4
COL9A2-209ENST00000490132 CEP350Q5VT06 3117 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 DDX60Q8IY21 1712 aaKnown RBP23.77■■□□□ 1.4
COL9A2-209ENST00000490132 RTKN2Q8IZC4 609 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 SYNE4Q8N205 404 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 C8orf58Q8NAV2 365 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 ZNF277Q9NRM2 450 aaPredicted RBP23.77■■□□□ 1.4
COL9A2-209ENST00000490132 HYPKQ9NX55 129 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 RNF123Q5XPI4 1314 aa23.77■■□□□ 1.4
COL9A2-209ENST00000490132 POTECB2RU33 542 aa23.76■■□□□ 1.39
COL9A2-209ENST00000490132 ANKRD13DQ6ZTN6 518 aa23.76■■□□□ 1.39
COL9A2-209ENST00000490132 ZNF428Q96B54 188 aa23.76■■□□□ 1.39
COL9A2-209ENST00000490132 RBM17Q96I25 401 aaKnown RBP23.76■■□□□ 1.39
COL9A2-209ENST00000490132 NLRP3Q96P20 1036 aa23.76■■□□□ 1.39
COL9A2-209ENST00000490132 CRAMP1Q96RY5 1269 aa23.76■■□□□ 1.39
COL9A2-209ENST00000490132 VEGFAP15692 232 aaPredicted RBP23.75■■□□□ 1.39
COL9A2-209ENST00000490132 CCDC27Q2M243 656 aa23.75■■□□□ 1.39
COL9A2-209ENST00000490132 DPY19L2Q6NUT2 758 aa23.75■■□□□ 1.39
COL9A2-209ENST00000490132 TAF1P21675 1872 aa23.75■■□□□ 1.39
COL9A2-209ENST00000490132 HCLS1P14317 486 aaPredicted RBP23.74■■□□□ 1.39
COL9A2-209ENST00000490132 WWC1Q8IX03 1113 aa23.74■■□□□ 1.39
COL9A2-209ENST00000490132 ISCA1Q9BUE6 129 aa23.74■■□□□ 1.39
COL9A2-209ENST00000490132 TRMT112Q9UI30 125 aaKnown RBP23.74■■□□□ 1.39
COL9A2-209ENST00000490132 PPEF1O14829 653 aaPredicted RBP23.73■■□□□ 1.39
COL9A2-209ENST00000490132 TSPYL6Q8N831 410 aa23.73■■□□□ 1.39
COL9A2-209ENST00000490132 TSR2Q969E8 191 aaKnown RBP23.73■■□□□ 1.39
COL9A2-209ENST00000490132 SH3TC1Q8TE82 1336 aa23.73■■□□□ 1.39
COL9A2-209ENST00000490132 ATP5J2-PTCD1G3V325 749 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 DDNO94850 711 aaPredicted RBP23.72■■□□□ 1.39
COL9A2-209ENST00000490132 FSTL1Q12841 308 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 CC2D2BQ6DHV5 1058 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 PSMD1Q99460 953 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 PHAXQ9H814 394 aaKnown RBP23.72■■□□□ 1.39
COL9A2-209ENST00000490132 ABCC4O15439 1325 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 COL4A5P29400 1685 aa23.72■■□□□ 1.39
COL9A2-209ENST00000490132 ZNF541Q9H0D2 1346 aa23.71■■□□□ 1.39
COL9A2-209ENST00000490132 TCERG1O14776 1098 aaKnown RBP23.71■■□□□ 1.39
COL9A2-209ENST00000490132 IARSP41252 1262 aaKnown RBP23.71■■□□□ 1.39
COL9A2-209ENST00000490132 APLP1P51693 650 aa23.7■■□□□ 1.38
COL9A2-209ENST00000490132 SMC1BQ8NDV3 1235 aa23.69■■□□□ 1.38
COL9A2-209ENST00000490132 SCN4AP35499 1836 aa23.68■■□□□ 1.38
COL9A2-209ENST00000490132 GOLGA2Q08379 1002 aa23.68■■□□□ 1.38
COL9A2-209ENST00000490132 NCBP3Q53F19 620 aaKnown RBP23.68■■□□□ 1.38
COL9A2-209ENST00000490132 CCDC30Q5VVM6 783 aa23.67■■□□□ 1.38
COL9A2-209ENST00000490132 RIC3Q7Z5B4 369 aa23.67■■□□□ 1.38
COL9A2-209ENST00000490132 FAM89AQ96GI7 184 aa23.67■■□□□ 1.38
COL9A2-209ENST00000490132 IL16Q14005 1332 aa23.66■■□□□ 1.38
COL9A2-209ENST00000490132 TRIM28Q13263 835 aaKnown RBP23.66■■□□□ 1.38
COL9A2-209ENST00000490132 ATP6V0A2Q9Y487 856 aa23.66■■□□□ 1.38
COL9A2-209ENST00000490132 COL4A1P02462 1669 aa23.65■■□□□ 1.38
COL9A2-209ENST00000490132 FZD9O00144 591 aa23.65■■□□□ 1.38
COL9A2-209ENST00000490132 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
COL9A2-209ENST00000490132 L3MBTL3Q96JM7 780 aaPredicted RBP23.65■■□□□ 1.38
COL9A2-209ENST00000490132 HTRA3P83110 453 aa23.64■■□□□ 1.37
COL9A2-209ENST00000490132 RTL5Q5HYW3 569 aaPredicted RBP23.64■■□□□ 1.37
COL9A2-209ENST00000490132 MYD88Q99836 296 aa23.64■■□□□ 1.37
COL9A2-209ENST00000490132 SALL2Q9Y467 1007 aaPredicted RBP23.64■■□□□ 1.37
COL9A2-209ENST00000490132 LRRC37AA6NMS7 1700 aa23.64■■□□□ 1.37
COL9A2-209ENST00000490132 GRAPQ13588 217 aa23.63■■□□□ 1.37
COL9A2-209ENST00000490132 DDX46Q7L014 1031 aaKnown RBP23.63■■□□□ 1.37
COL9A2-209ENST00000490132 GRAPLQ8TC17 118 aaPredicted RBP23.63■■□□□ 1.37
COL9A2-209ENST00000490132 BBOX1O75936 387 aa23.62■■□□□ 1.37
COL9A2-209ENST00000490132 POTEIP0CG38 1075 aa23.62■■□□□ 1.37
COL9A2-209ENST00000490132 POTEJP0CG39 1038 aa23.62■■□□□ 1.37
COL9A2-209ENST00000490132 TWISTNBQ3B726 338 aaPredicted RBP23.62■■□□□ 1.37
COL9A2-209ENST00000490132 FANCIQ9NVI1 1328 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 SF3B3Q15393 1217 aaKnown RBP23.61■■□□□ 1.37
COL9A2-209ENST00000490132 SP8Q8IXZ3 490 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 LARGE2Q8N3Y3 721 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 DNAJC5GQ8N7S2 189 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 JDP2Q8WYK2 163 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 CHMP4AQ9BY43 222 aa23.61■■□□□ 1.37
COL9A2-209ENST00000490132 CACNA1FO60840 1977 aa23.6■■□□□ 1.37
COL9A2-209ENST00000490132 IRS4O14654 1257 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-209ENST00000490132 FAM9BQ8IZU0 186 aa23.6■■□□□ 1.37
COL9A2-209ENST00000490132 ZBTB38Q8NAP3 1195 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-209ENST00000490132 METTL22Q9BUU2 404 aaPredicted RBP23.6■■□□□ 1.37
COL9A2-209ENST00000490132 TAF1DQ9H5J8 278 aaPredicted RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms