RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZNF277Q9NRM2 450 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF1B-202ENST00000489921 COPS6Q7L5N1 327 aa25.41■■□□□ 1.66
TNFRSF1B-202ENST00000489921 SLC51AQ86UW1 340 aa25.41■■□□□ 1.66
TNFRSF1B-202ENST00000489921 RTKN2Q8IZC4 609 aa25.41■■□□□ 1.66
TNFRSF1B-202ENST00000489921 XAGE3Q8WTP9 111 aa25.4■■□□□ 1.66
TNFRSF1B-202ENST00000489921 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
TNFRSF1B-202ENST00000489921 PARP10Q53GL7 1025 aa25.39■■□□□ 1.66
TNFRSF1B-202ENST00000489921 DDX21Q9NR30 783 aaKnown RBP eCLIP25.39■■□□□ 1.66
TNFRSF1B-202ENST00000489921 SLC10A5Q5PT55 438 aa25.38■■□□□ 1.65
TNFRSF1B-202ENST00000489921 PPP1R42Q7Z4L9 355 aa25.38■■□□□ 1.65
TNFRSF1B-202ENST00000489921 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
TNFRSF1B-202ENST00000489921 LAMB2P55268 1798 aa25.38■■□□□ 1.65
TNFRSF1B-202ENST00000489921 COL4A5P29400 1685 aa25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 AIMP1Q12904 312 aaKnown RBP25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 CFAP44Q96MT7 982 aa25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 CRAMP1Q96RY5 1269 aa25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 SCN4AP35499 1836 aa25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 ZNF541Q9H0D2 1346 aa25.37■■□□□ 1.65
TNFRSF1B-202ENST00000489921 ZNF853P0CG23 659 aa25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 POTEIP0CG38 1075 aa25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 POTEJP0CG39 1038 aa25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 RPGRQ92834 1020 aaKnown RBP25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 L3MBTL3Q96JM7 780 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 PSMD1Q99460 953 aa25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 UTP14AQ9BVJ6 771 aaKnown RBP25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 CHPF2Q9P2E5 772 aa25.36■■□□□ 1.65
TNFRSF1B-202ENST00000489921 IARSP41252 1262 aaKnown RBP25.35■■□□□ 1.65
TNFRSF1B-202ENST00000489921 NLRP10Q86W26 655 aa25.35■■□□□ 1.65
TNFRSF1B-202ENST00000489921 KLRG1Q96E93 195 aa25.35■■□□□ 1.65
TNFRSF1B-202ENST00000489921 FZD9O00144 591 aa25.34■■□□□ 1.65
TNFRSF1B-202ENST00000489921 TCIRG1Q13488 830 aa25.34■■□□□ 1.65
TNFRSF1B-202ENST00000489921 RBM17Q96I25 401 aaKnown RBP25.34■■□□□ 1.65
TNFRSF1B-202ENST00000489921 APAF1O14727 1248 aa25.33■■□□□ 1.65
TNFRSF1B-202ENST00000489921 HOXB7P09629 217 aa25.33■■□□□ 1.65
TNFRSF1B-202ENST00000489921 CC2D2BQ6DHV5 1058 aa25.33■■□□□ 1.65
TNFRSF1B-202ENST00000489921 MBIPQ9NS73 344 aa25.33■■□□□ 1.65
TNFRSF1B-202ENST00000489921 HDGFL1Q5TGJ6 251 aa25.32■■□□□ 1.64
TNFRSF1B-202ENST00000489921 JMYQ8N9B5 988 aa25.32■■□□□ 1.64
TNFRSF1B-202ENST00000489921 NLRP3Q96P20 1036 aa25.32■■□□□ 1.64
TNFRSF1B-202ENST00000489921 CCDC184Q52MB2 194 aa25.31■■□□□ 1.64
TNFRSF1B-202ENST00000489921 HSP90AB3PQ58FF7 597 aa25.31■■□□□ 1.64
TNFRSF1B-202ENST00000489921 RNF123Q5XPI4 1314 aa25.31■■□□□ 1.64
TNFRSF1B-202ENST00000489921 TAF1P21675 1872 aa25.3■■□□□ 1.64
TNFRSF1B-202ENST00000489921 PPEF1O14829 653 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF1B-202ENST00000489921 DUSP27Q5VZP5 1158 aa25.3■■□□□ 1.64
TNFRSF1B-202ENST00000489921 CHADLQ6NUI6 762 aa25.3■■□□□ 1.64
TNFRSF1B-202ENST00000489921 TAF1DQ9H5J8 278 aaPredicted RBP25.3■■□□□ 1.64
TNFRSF1B-202ENST00000489921 HCLS1P14317 486 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF1B-202ENST00000489921 DBF4Q9UBU7 674 aaPredicted RBP25.29■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ABCC4O15439 1325 aa25.29■■□□□ 1.64
TNFRSF1B-202ENST00000489921 DDX60Q8IY21 1712 aaKnown RBP25.29■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ADAMTSL1Q8N6G6 1762 aa25.28■■□□□ 1.64
TNFRSF1B-202ENST00000489921 TCERG1O14776 1098 aaKnown RBP25.28■■□□□ 1.64
TNFRSF1B-202ENST00000489921 PLBD2Q8NHP8 589 aa25.28■■□□□ 1.64
TNFRSF1B-202ENST00000489921 IQCA1LA6NCM1 817 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 GRIPAP1Q4V328 841 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ANKRD13DQ6ZTN6 518 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ISCA1Q9BUE6 129 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 IFT57Q9NWB7 429 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 TRMT112Q9UI30 125 aaKnown RBP25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ATP6V0A2Q9Y487 856 aa25.27■■□□□ 1.64
TNFRSF1B-202ENST00000489921 ZNF428Q96B54 188 aa25.26■■□□□ 1.63
TNFRSF1B-202ENST00000489921 GPC2Q8N158 579 aa25.25■■□□□ 1.63
TNFRSF1B-202ENST00000489921 LTBP1Q14766 1721 aa25.25■■□□□ 1.63
TNFRSF1B-202ENST00000489921 SH3TC1Q8TE82 1336 aa25.24■■□□□ 1.63
TNFRSF1B-202ENST00000489921 IFFO2Q5TF58 517 aa25.24■■□□□ 1.63
TNFRSF1B-202ENST00000489921 JDP2Q8WYK2 163 aa25.24■■□□□ 1.63
TNFRSF1B-202ENST00000489921 HYPKQ9NX55 129 aa25.24■■□□□ 1.63
TNFRSF1B-202ENST00000489921 GNAI1P63096 354 aa25.23■■□□□ 1.63
TNFRSF1B-202ENST00000489921 LDHDQ86WU2 507 aa25.23■■□□□ 1.63
TNFRSF1B-202ENST00000489921 HACL1Q9UJ83 578 aa25.23■■□□□ 1.63
TNFRSF1B-202ENST00000489921 PASKQ96RG2 1323 aa25.22■■□□□ 1.63
TNFRSF1B-202ENST00000489921 ATP5J2-PTCD1G3V325 749 aa25.22■■□□□ 1.63
TNFRSF1B-202ENST00000489921 C8orf58Q8NAV2 365 aa25.22■■□□□ 1.63
TNFRSF1B-202ENST00000489921 RTFDC1Q9BY42 306 aaPredicted RBP25.22■■□□□ 1.63
TNFRSF1B-202ENST00000489921 COL4A1P02462 1669 aa25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 ELL2O00472 640 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 BBOX1O75936 387 aa25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 ITGBL1O95965 494 aaPredicted RBP25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 EPHX2P34913 555 aa25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 SP8Q8IXZ3 490 aa25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 LARGE2Q8N3Y3 721 aa25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 PHAXQ9H814 394 aaKnown RBP25.21■■□□□ 1.63
TNFRSF1B-202ENST00000489921 TRIM28Q13263 835 aaKnown RBP25.2■■□□□ 1.62
TNFRSF1B-202ENST00000489921 FAM89AQ96GI7 184 aa25.2■■□□□ 1.62
TNFRSF1B-202ENST00000489921 CALD1Q05682 793 aaKnown RBP25.19■■□□□ 1.62
TNFRSF1B-202ENST00000489921 LRRC37AA6NMS7 1700 aa25.19■■□□□ 1.62
TNFRSF1B-202ENST00000489921 EIF6P56537 245 aaKnown RBP25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 GRAPQ13588 217 aa25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 AOC3Q16853 763 aa25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 EAPPQ56P03 285 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 GRAPLQ8TC17 118 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 VPS33BQ9H267 617 aa25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 CREBZFQ9NS37 354 aa25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 GJA3Q9Y6H8 435 aa25.18■■□□□ 1.62
TNFRSF1B-202ENST00000489921 PPIP5K2O43314 1243 aa25.17■■□□□ 1.62
TNFRSF1B-202ENST00000489921 SCNN1DP51172 638 aa25.17■■□□□ 1.62
TNFRSF1B-202ENST00000489921 DDX46Q7L014 1031 aaKnown RBP25.17■■□□□ 1.62
TNFRSF1B-202ENST00000489921 DUOX1Q9NRD9 1551 aa25.17■■□□□ 1.62
TNFRSF1B-202ENST00000489921 SF3B3Q15393 1217 aaKnown RBP25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms