RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 TMCO4Q5TGY1 634 aa10.04□□□□□ -0.8
VPS26A-206ENST00000489794 MZF1P28698 734 aaPredicted RBP10.03□□□□□ -0.8
VPS26A-206ENST00000489794 ARHGAP4P98171 946 aa10.03□□□□□ -0.8
VPS26A-206ENST00000489794 UBAP2LQ14157 1087 aaKnown RBP10.03□□□□□ -0.8
VPS26A-206ENST00000489794 GTPBP3Q969Y2 492 aaKnown RBP10.03□□□□□ -0.8
VPS26A-206ENST00000489794 BRD7Q9NPI1 651 aa10.03□□□□□ -0.8
VPS26A-206ENST00000489794 NDFIP2Q9NV92 336 aa10.03□□□□□ -0.8
VPS26A-206ENST00000489794 ERBB4Q15303 1308 aa10.03□□□□□ -0.8
VPS26A-206ENST00000489794 EFSO43281 561 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 THBS1P07996 1170 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 ECM1Q16610 540 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 VWA5B2Q8N398 1253 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 TTC16Q8NEE8 873 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
VPS26A-206ENST00000489794 FNDC3AQ9Y2H6 1198 aaKnown RBP10.02□□□□□ -0.81
VPS26A-206ENST00000489794 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
VPS26A-206ENST00000489794 BNIP3LO60238 219 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 VSIG8P0DPA2 414 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 TNP2Q05952 138 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 KLRG1Q96E93 195 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 EFCC1Q9HA90 598 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 KCNH4Q9UQ05 1017 aa10.01□□□□□ -0.81
VPS26A-206ENST00000489794 OPLAHO14841 1288 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 ZBTB39O15060 712 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 MAPTP10636 758 aaKnown RBP10□□□□□ -0.81
VPS26A-206ENST00000489794 EHHADHQ08426 723 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 PDE3BQ13370 1112 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 FAM182BQ5T319 152 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 ZSCAN1Q8NBB4 408 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 MARK1Q9P0L2 795 aa10□□□□□ -0.81
VPS26A-206ENST00000489794 FAM26DQ5JW98 314 aa9.99□□□□□ -0.81
VPS26A-206ENST00000489794 NSFL1CQ9UNZ2 370 aaKnown RBP9.99□□□□□ -0.81
VPS26A-206ENST00000489794 RTCBQ9Y3I0 505 aaKnown RBP9.99□□□□□ -0.81
VPS26A-206ENST00000489794 DCDC2BA2VCK2 349 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 FZD6O60353 706 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 ERCC3P19447 782 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 FGFR3P22607 806 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
VPS26A-206ENST00000489794 RGL4Q8IZJ4 473 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 GPR152Q8TDT2 470 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
VPS26A-206ENST00000489794 EGFRP00533 1210 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 PDGFAP04085 211 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 DNM1Q05193 864 aaKnown RBP9.97□□□□□ -0.81
VPS26A-206ENST00000489794 NEUROD1Q13562 356 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 ATCAYQ86WG3 371 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 ZSCAN29Q8IWY8 852 aaPredicted RBP9.97□□□□□ -0.81
VPS26A-206ENST00000489794 EDEM1Q92611 657 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 RBCK1Q9BYM8 510 aa9.97□□□□□ -0.81
VPS26A-206ENST00000489794 CCDC9Q9Y3X0 531 aaKnown RBP9.97□□□□□ -0.81
VPS26A-206ENST00000489794 MAPK1P28482 360 aa9.96□□□□□ -0.82
VPS26A-206ENST00000489794 NUDT16Q96DE0 195 aaKnown RBP9.96□□□□□ -0.82
VPS26A-206ENST00000489794 GJD3Q8N144 294 aa9.95□□□□□ -0.82
VPS26A-206ENST00000489794 CMTR1Q8N1G2 835 aaKnown RBP9.95□□□□□ -0.82
VPS26A-206ENST00000489794 DMRTB1Q96MA1 342 aa9.95□□□□□ -0.82
VPS26A-206ENST00000489794 POLIQ9UNA4 740 aa9.95□□□□□ -0.82
VPS26A-206ENST00000489794 SFSWAPQ12872 951 aaKnown RBP9.94□□□□□ -0.82
VPS26A-206ENST00000489794 PDE12Q6L8Q7 609 aaKnown RBP9.94□□□□□ -0.82
VPS26A-206ENST00000489794 CCDC87Q9NVE4 849 aa9.94□□□□□ -0.82
VPS26A-206ENST00000489794 UBAP1LF5GYI3 381 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 GPR25O00155 361 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 XYLBO75191 536 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 NEFLP07196 543 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 MX2P20592 715 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 LORP23490 312 aaPredicted RBP9.93□□□□□ -0.82
VPS26A-206ENST00000489794 CCINQ13939 588 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 ASB16Q96NS5 453 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 AVENQ9NQS1 362 aaPredicted RBP9.93□□□□□ -0.82
VPS26A-206ENST00000489794 PODXL2Q9NZ53 605 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 KCNMB2Q9Y691 235 aa9.93□□□□□ -0.82
VPS26A-206ENST00000489794 CD33P20138 364 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 MAP2K3P46734 347 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 SPEM2Q0P670 501 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 TMC1Q8TDI8 760 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 FAM129BQ96TA1 746 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 MBIPQ9NS73 344 aa9.92□□□□□ -0.82
VPS26A-206ENST00000489794 BMP4P12644 408 aa9.91□□□□□ -0.82
VPS26A-206ENST00000489794 MFAP1P55081 439 aaKnown RBP9.91□□□□□ -0.82
VPS26A-206ENST00000489794 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
VPS26A-206ENST00000489794 GSX2Q9BZM3 304 aa9.91□□□□□ -0.82
VPS26A-206ENST00000489794 STRN4Q9NRL3 753 aa9.91□□□□□ -0.82
VPS26A-206ENST00000489794 PRR12Q9ULL5 1215 aa9.91□□□□□ -0.82
VPS26A-206ENST00000489794 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
VPS26A-206ENST00000489794 ALKBH8Q96BT7 664 aaKnown RBP9.9□□□□□ -0.82
VPS26A-206ENST00000489794 GRNP28799 593 aaKnown RBP9.89□□□□□ -0.83
VPS26A-206ENST00000489794 GAS6Q14393 721 aa9.89□□□□□ -0.83
VPS26A-206ENST00000489794 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
VPS26A-206ENST00000489794 GPR161Q8N6U8 529 aaKnown RBP9.89□□□□□ -0.83
VPS26A-206ENST00000489794 USP20Q9Y2K6 914 aa9.89□□□□□ -0.83
VPS26A-206ENST00000489794 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.89□□□□□ -0.83
VPS26A-206ENST00000489794 MAP3K6O95382 1288 aa9.88□□□□□ -0.83
VPS26A-206ENST00000489794 CTBSQ01459 385 aa9.88□□□□□ -0.83
VPS26A-206ENST00000489794 COL19A1Q14993 1142 aa9.88□□□□□ -0.83
VPS26A-206ENST00000489794 TRIP4Q15650 581 aaPredicted RBP9.88□□□□□ -0.83
VPS26A-206ENST00000489794 ZNF468Q5VIY5 522 aaPredicted RBP9.88□□□□□ -0.83
VPS26A-206ENST00000489794 COL25A1Q9BXS0 654 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms