RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 PARP10Q53GL7 1025 aa25.53■■□□□ 1.68
APTX-229ENST00000489583 ZNF541Q9H0D2 1346 aa25.53■■□□□ 1.68
APTX-229ENST00000489583 SCN4AP35499 1836 aa25.52■■□□□ 1.68
APTX-229ENST00000489583 EIF2S2P20042 333 aaKnown RBP25.52■■□□□ 1.68
APTX-229ENST00000489583 RIPK4P57078 832 aa25.52■■□□□ 1.68
APTX-229ENST00000489583 NLRP3Q96P20 1036 aa25.52■■□□□ 1.68
APTX-229ENST00000489583 IBTKQ9P2D0 1353 aaPredicted RBP25.52■■□□□ 1.68
APTX-229ENST00000489583 TMEM88BA6NKF7 163 aa25.51■■□□□ 1.67
APTX-229ENST00000489583 FZD9O00144 591 aa25.51■■□□□ 1.67
APTX-229ENST00000489583 GIGYF2Q6Y7W6 1299 aaKnown RBP25.51■■□□□ 1.67
APTX-229ENST00000489583 AIDAQ96BJ3 306 aa25.51■■□□□ 1.67
APTX-229ENST00000489583 GJA3Q9Y6H8 435 aa25.51■■□□□ 1.67
APTX-229ENST00000489583 RALBP1Q15311 655 aa25.5■■□□□ 1.67
APTX-229ENST00000489583 RNF123Q5XPI4 1314 aa25.5■■□□□ 1.67
APTX-229ENST00000489583 LARGE2Q8N3Y3 721 aa25.5■■□□□ 1.67
APTX-229ENST00000489583 ABCC12Q96J65 1359 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 PPEF1O14829 653 aaPredicted RBP25.49■■□□□ 1.67
APTX-229ENST00000489583 HOXA10P31260 410 aaPredicted RBP25.49■■□□□ 1.67
APTX-229ENST00000489583 SUSD4Q5VX71 490 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 CRAMP1Q96RY5 1269 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 BABAM1Q9NWV8 329 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 PCNTO95613 3336 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 DLG5Q8TDM6 1919 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 KDM3BQ7LBC6 1761 aa25.49■■□□□ 1.67
APTX-229ENST00000489583 TCERG1O14776 1098 aaKnown RBP25.48■■□□□ 1.67
APTX-229ENST00000489583 UTP14AQ9BVJ6 771 aaKnown RBP25.48■■□□□ 1.67
APTX-229ENST00000489583 HSP90AB3PQ58FF7 597 aa25.47■■□□□ 1.67
APTX-229ENST00000489583 ZNF34Q8IZ26 560 aa25.47■■□□□ 1.67
APTX-229ENST00000489583 RIC1Q4ADV7 1423 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 CNTNAP1P78357 1384 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 UBN2Q6ZU65 1347 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 PASKQ96RG2 1323 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 NIM1KQ8IY84 436 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 NUP98P52948 1817 aa25.46■■□□□ 1.67
APTX-229ENST00000489583 NTSR2O95665 410 aa25.44■■□□□ 1.66
APTX-229ENST00000489583 SUPT20HQ8NEM7 779 aa25.44■■□□□ 1.66
APTX-229ENST00000489583 MAP1SQ66K74 1059 aaPredicted RBP25.43■■□□□ 1.66
APTX-229ENST00000489583 PPIP5K2O43314 1243 aa25.42■■□□□ 1.66
APTX-229ENST00000489583 ITGBL1O95965 494 aaPredicted RBP25.42■■□□□ 1.66
APTX-229ENST00000489583 ZEB1P37275 1124 aaPredicted RBP25.42■■□□□ 1.66
APTX-229ENST00000489583 AIMP1Q12904 312 aaKnown RBP25.42■■□□□ 1.66
APTX-229ENST00000489583 VPS33BQ9H267 617 aa25.42■■□□□ 1.66
APTX-229ENST00000489583 ABT1Q9ULW3 272 aaKnown RBP25.42■■□□□ 1.66
APTX-229ENST00000489583 TMPOP42166 694 aaKnown RBP25.41■■□□□ 1.66
APTX-229ENST00000489583 WDR43Q15061 677 aaKnown RBP eCLIP25.41■■□□□ 1.66
APTX-229ENST00000489583 NEUROD2Q15784 382 aa25.41■■□□□ 1.66
APTX-229ENST00000489583 DEFB115Q30KQ5 88 aa25.4■■□□□ 1.66
APTX-229ENST00000489583 NECTIN2Q92692 538 aa25.4■■□□□ 1.66
APTX-229ENST00000489583 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
APTX-229ENST00000489583 VEGFBP49765 207 aa25.39■■□□□ 1.66
APTX-229ENST00000489583 DDX46Q7L014 1031 aaKnown RBP25.39■■□□□ 1.66
APTX-229ENST00000489583 TRMT112Q9UI30 125 aaKnown RBP25.39■■□□□ 1.66
APTX-229ENST00000489583 ATP6V0A2Q9Y487 856 aa25.39■■□□□ 1.66
APTX-229ENST00000489583 BBOX1O75936 387 aa25.38■■□□□ 1.65
APTX-229ENST00000489583 CTCFP49711 727 aaPredicted RBP25.38■■□□□ 1.65
APTX-229ENST00000489583 SLC10A5Q5PT55 438 aa25.38■■□□□ 1.65
APTX-229ENST00000489583 DPP8Q6V1X1 898 aaPredicted RBP25.38■■□□□ 1.65
APTX-229ENST00000489583 USP50Q70EL3 339 aaPredicted RBP25.38■■□□□ 1.65
APTX-229ENST00000489583 COPS6Q7L5N1 327 aa25.38■■□□□ 1.65
APTX-229ENST00000489583 ANXA1P04083 346 aa25.36■■□□□ 1.65
APTX-229ENST00000489583 PDIA6Q15084 440 aa25.36■■□□□ 1.65
APTX-229ENST00000489583 AOC3Q16853 763 aa25.36■■□□□ 1.65
APTX-229ENST00000489583 PAXIP1Q6ZW49 1069 aaPredicted RBP25.36■■□□□ 1.65
APTX-229ENST00000489583 XAGE3Q8WTP9 111 aa25.36■■□□□ 1.65
APTX-229ENST00000489583 DDX21Q9NR30 783 aaKnown RBP eCLIP25.35■■□□□ 1.65
APTX-229ENST00000489583 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
APTX-229ENST00000489583 MYBBP1AQ9BQG0 1328 aaKnown RBP25.35■■□□□ 1.65
APTX-229ENST00000489583 FOXN1O15353 648 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 EPS15P42566 896 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 MAP2K1Q02750 393 aaPredicted RBP25.34■■□□□ 1.65
APTX-229ENST00000489583 PROSER3Q2NL68 480 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 MPNDQ8N594 471 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 BEGAINQ9BUH8 593 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 PRDM10Q9NQV6 1147 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 ZNRF3Q9ULT6 936 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 ABCC4O15439 1325 aa25.34■■□□□ 1.65
APTX-229ENST00000489583 RASSF10A6NK89 507 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 HCLS1P14317 486 aaPredicted RBP25.33■■□□□ 1.65
APTX-229ENST00000489583 TCIRG1Q13488 830 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 C3orf67Q6ZVT6 689 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 TMC4Q7Z404 712 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 NLRP10Q86W26 655 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 SP8Q8IXZ3 490 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 CCDC146Q8IYE0 955 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 SNED1Q8TER0 1413 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 RUNDC1Q96C34 613 aa25.33■■□□□ 1.65
APTX-229ENST00000489583 ECE1P42892 770 aa25.32■■□□□ 1.64
APTX-229ENST00000489583 SCNN1DP51172 638 aa25.32■■□□□ 1.64
APTX-229ENST00000489583 TNIP1Q15025 636 aa25.32■■□□□ 1.64
APTX-229ENST00000489583 BCL2L13Q9BXK5 485 aa25.32■■□□□ 1.64
APTX-229ENST00000489583 ADARB2Q9NS39 739 aaKnown RBP25.32■■□□□ 1.64
APTX-229ENST00000489583 DDX10Q13206 875 aaKnown RBP25.31■■□□□ 1.64
APTX-229ENST00000489583 HDGFL1Q5TGJ6 251 aa25.31■■□□□ 1.64
APTX-229ENST00000489583 LRP10Q7Z4F1 713 aa25.31■■□□□ 1.64
APTX-229ENST00000489583 WDR33Q9C0J8 1336 aaKnown RBP25.31■■□□□ 1.64
APTX-229ENST00000489583 CHL1O00533 1208 aa25.29■■□□□ 1.64
APTX-229ENST00000489583 GRAPQ13588 217 aa25.29■■□□□ 1.64
APTX-229ENST00000489583 CIAPIN1Q6FI81 312 aa25.29■■□□□ 1.64
APTX-229ENST00000489583 GRAPLQ8TC17 118 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms