RNA–Protein interactions for RNA: ENST00000489519.1

CACFD1-205, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 795 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-205ENST00000489519 GRIPAP1Q4V328 841 aa26.25■■□□□ 1.79
CACFD1-205ENST00000489519 PRKRIP1Q9H875 184 aaPredicted RBP26.25■■□□□ 1.79
CACFD1-205ENST00000489519 HSP90AB3PQ58FF7 597 aa26.24■■□□□ 1.79
CACFD1-205ENST00000489519 COPS6Q7L5N1 327 aa26.24■■□□□ 1.79
CACFD1-205ENST00000489519 SYNE4Q8N205 404 aa26.24■■□□□ 1.79
CACFD1-205ENST00000489519 RBM17Q96I25 401 aaKnown RBP26.24■■□□□ 1.79
CACFD1-205ENST00000489519 CRAMP1Q96RY5 1269 aa26.24■■□□□ 1.79
CACFD1-205ENST00000489519 PSMD1Q99460 953 aa26.24■■□□□ 1.79
CACFD1-205ENST00000489519 UTP14AQ9BVJ6 771 aaKnown RBP26.24■■□□□ 1.79
CACFD1-205ENST00000489519 LAS1LQ9Y4W2 734 aaKnown RBP26.24■■□□□ 1.79
CACFD1-205ENST00000489519 ANXA1P04083 346 aa26.23■■□□□ 1.79
CACFD1-205ENST00000489519 L3MBTL3Q96JM7 780 aaPredicted RBP26.23■■□□□ 1.79
CACFD1-205ENST00000489519 NLRP3Q96P20 1036 aa26.23■■□□□ 1.79
CACFD1-205ENST00000489519 DDX21Q9NR30 783 aaKnown RBP eCLIP26.23■■□□□ 1.79
CACFD1-205ENST00000489519 IARSP41252 1262 aaKnown RBP26.22■■□□□ 1.79
CACFD1-205ENST00000489519 SLC10A5Q5PT55 438 aa26.22■■□□□ 1.79
CACFD1-205ENST00000489519 NECTIN2Q92692 538 aa26.22■■□□□ 1.79
CACFD1-205ENST00000489519 RNF123Q5XPI4 1314 aa26.21■■□□□ 1.79
CACFD1-205ENST00000489519 CHADLQ6NUI6 762 aa26.21■■□□□ 1.79
CACFD1-205ENST00000489519 JMYQ8N9B5 988 aa26.21■■□□□ 1.79
CACFD1-205ENST00000489519 XAGE3Q8WTP9 111 aa26.21■■□□□ 1.79
CACFD1-205ENST00000489519 HOXB7P09629 217 aa26.2■■□□□ 1.78
CACFD1-205ENST00000489519 AIMP1Q12904 312 aaKnown RBP26.2■■□□□ 1.78
CACFD1-205ENST00000489519 IFFO2Q5TF58 517 aa26.2■■□□□ 1.78
CACFD1-205ENST00000489519 SCN4AP35499 1836 aa26.19■■□□□ 1.78
CACFD1-205ENST00000489519 FZD9O00144 591 aa26.19■■□□□ 1.78
CACFD1-205ENST00000489519 JDP2Q8WYK2 163 aa26.19■■□□□ 1.78
CACFD1-205ENST00000489519 CFAP44Q96MT7 982 aa26.19■■□□□ 1.78
CACFD1-205ENST00000489519 TCIRG1Q13488 830 aa26.18■■□□□ 1.78
CACFD1-205ENST00000489519 KRT24Q2M2I5 525 aa26.18■■□□□ 1.78
CACFD1-205ENST00000489519 SNED1Q8TER0 1413 aa26.18■■□□□ 1.78
CACFD1-205ENST00000489519 TMX4Q9H1E5 349 aaPredicted RBP26.18■■□□□ 1.78
CACFD1-205ENST00000489519 ZNF541Q9H0D2 1346 aa26.17■■□□□ 1.78
CACFD1-205ENST00000489519 C3orf67Q6ZVT6 689 aa26.17■■□□□ 1.78
CACFD1-205ENST00000489519 TAF1DQ9H5J8 278 aaPredicted RBP26.17■■□□□ 1.78
CACFD1-205ENST00000489519 PPEF1O14829 653 aaPredicted RBP26.16■■□□□ 1.78
CACFD1-205ENST00000489519 HDGFL1Q5TGJ6 251 aa26.16■■□□□ 1.78
CACFD1-205ENST00000489519 NLRP10Q86W26 655 aa26.16■■□□□ 1.78
CACFD1-205ENST00000489519 LDHDQ86WU2 507 aa26.15■■□□□ 1.78
CACFD1-205ENST00000489519 GPC2Q8N158 579 aa26.15■■□□□ 1.78
CACFD1-205ENST00000489519 CHPF2Q9P2E5 772 aa26.15■■□□□ 1.78
CACFD1-205ENST00000489519 DBF4Q9UBU7 674 aaPredicted RBP26.15■■□□□ 1.78
CACFD1-205ENST00000489519 HACL1Q9UJ83 578 aa26.15■■□□□ 1.78
CACFD1-205ENST00000489519 POTEIP0CG38 1075 aa26.14■■□□□ 1.78
CACFD1-205ENST00000489519 POTEJP0CG39 1038 aa26.14■■□□□ 1.78
CACFD1-205ENST00000489519 ANKRD36CQ5JPF3 1778 aa26.14■■□□□ 1.78
CACFD1-205ENST00000489519 CALD1Q05682 793 aaKnown RBP26.13■■□□□ 1.77
CACFD1-205ENST00000489519 PLBD2Q8NHP8 589 aa26.13■■□□□ 1.77
CACFD1-205ENST00000489519 TRMT112Q9UI30 125 aaKnown RBP26.13■■□□□ 1.77
CACFD1-205ENST00000489519 ATP6V0A2Q9Y487 856 aa26.13■■□□□ 1.77
CACFD1-205ENST00000489519 TCERG1O14776 1098 aaKnown RBP26.12■■□□□ 1.77
CACFD1-205ENST00000489519 BBOX1O75936 387 aa26.12■■□□□ 1.77
CACFD1-205ENST00000489519 EIF6P56537 245 aaKnown RBP26.12■■□□□ 1.77
CACFD1-205ENST00000489519 ANKRD13DQ6ZTN6 518 aa26.12■■□□□ 1.77
CACFD1-205ENST00000489519 HYPKQ9NX55 129 aa26.12■■□□□ 1.77
CACFD1-205ENST00000489519 SH3TC1Q8TE82 1336 aa26.12■■□□□ 1.77
CACFD1-205ENST00000489519 APAF1O14727 1248 aa26.11■■□□□ 1.77
CACFD1-205ENST00000489519 DUSP27Q5VZP5 1158 aa26.11■■□□□ 1.77
CACFD1-205ENST00000489519 PNMA8AQ86V59 439 aaPredicted RBP26.11■■□□□ 1.77
CACFD1-205ENST00000489519 LARGE2Q8N3Y3 721 aa26.11■■□□□ 1.77
CACFD1-205ENST00000489519 VPS33BQ9H267 617 aa26.11■■□□□ 1.77
CACFD1-205ENST00000489519 MBIPQ9NS73 344 aa26.11■■□□□ 1.77
CACFD1-205ENST00000489519 HCLS1P14317 486 aaPredicted RBP26.1■■□□□ 1.77
CACFD1-205ENST00000489519 EPHX2P34913 555 aa26.1■■□□□ 1.77
CACFD1-205ENST00000489519 CREBZFQ9NS37 354 aa26.1■■□□□ 1.77
CACFD1-205ENST00000489519 ABCC4O15439 1325 aa26.1■■□□□ 1.77
CACFD1-205ENST00000489519 PCNTO95613 3336 aa26.09■■□□□ 1.77
CACFD1-205ENST00000489519 ZNF853P0CG23 659 aa26.09■■□□□ 1.77
CACFD1-205ENST00000489519 EAPPQ56P03 285 aaPredicted RBP26.09■■□□□ 1.77
CACFD1-205ENST00000489519 IFT57Q9NWB7 429 aa26.09■■□□□ 1.77
CACFD1-205ENST00000489519 GNAI1P63096 354 aa26.08■■□□□ 1.77
CACFD1-205ENST00000489519 DDX46Q7L014 1031 aaKnown RBP26.08■■□□□ 1.77
CACFD1-205ENST00000489519 SP8Q8IXZ3 490 aa26.07■■□□□ 1.76
CACFD1-205ENST00000489519 NIM1KQ8IY84 436 aa26.07■■□□□ 1.76
CACFD1-205ENST00000489519 SUPT20HQ8NEM7 779 aa26.07■■□□□ 1.76
CACFD1-205ENST00000489519 CLEC11AQ9Y240 323 aa26.07■■□□□ 1.76
CACFD1-205ENST00000489519 ISCA1Q9BUE6 129 aa26.06■■□□□ 1.76
CACFD1-205ENST00000489519 GJA3Q9Y6H8 435 aa26.06■■□□□ 1.76
CACFD1-205ENST00000489519 PPIP5K2O43314 1243 aa26.05■■□□□ 1.76
CACFD1-205ENST00000489519 RTFDC1Q9BY42 306 aaPredicted RBP26.05■■□□□ 1.76
CACFD1-205ENST00000489519 PASKQ96RG2 1323 aa26.05■■□□□ 1.76
CACFD1-205ENST00000489519 LAMB2P55268 1798 aa26.05■■□□□ 1.76
CACFD1-205ENST00000489519 COL4A5P29400 1685 aa26.04■■□□□ 1.76
CACFD1-205ENST00000489519 ITGBL1O95965 494 aaPredicted RBP26.04■■□□□ 1.76
CACFD1-205ENST00000489519 LMOD1P29536 600 aaPredicted RBP26.04■■□□□ 1.76
CACFD1-205ENST00000489519 GRAPQ13588 217 aa26.04■■□□□ 1.76
CACFD1-205ENST00000489519 TMC4Q7Z404 712 aa26.04■■□□□ 1.76
CACFD1-205ENST00000489519 GRAPLQ8TC17 118 aaPredicted RBP26.04■■□□□ 1.76
CACFD1-205ENST00000489519 CHMP4AQ9BY43 222 aa26.04■■□□□ 1.76
CACFD1-205ENST00000489519 TRIM28Q13263 835 aaKnown RBP26.03■■□□□ 1.76
CACFD1-205ENST00000489519 DPP8Q6V1X1 898 aaPredicted RBP26.03■■□□□ 1.76
CACFD1-205ENST00000489519 SLC51AQ86UW1 340 aa26.03■■□□□ 1.76
CACFD1-205ENST00000489519 MPNDQ8N594 471 aa26.03■■□□□ 1.76
CACFD1-205ENST00000489519 ATP5J2-PTCD1G3V325 749 aa26.02■■□□□ 1.76
CACFD1-205ENST00000489519 AOC3Q16853 763 aa26.01■■□□□ 1.75
CACFD1-205ENST00000489519 FAM89AQ96GI7 184 aa26.01■■□□□ 1.75
CACFD1-205ENST00000489519 ZNRF3Q9ULT6 936 aa26.01■■□□□ 1.75
CACFD1-205ENST00000489519 GOLGA2Q08379 1002 aa26■■□□□ 1.75
CACFD1-205ENST00000489519 SF3B3Q15393 1217 aaKnown RBP26■■□□□ 1.75
CACFD1-205ENST00000489519 RIC3Q7Z5B4 369 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms