RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 ABCC6O95255 1503 aa12.35□□□□□ -0.43
TNRC6B-208ENST00000489500 COL18A1P39060 1754 aa12.35□□□□□ -0.43
TNRC6B-208ENST00000489500 CDCA8Q53HL2 280 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 CARD10Q9BWT7 1032 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 OVOS2A0A0G2JMS6 1433 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
TNRC6B-208ENST00000489500 LTN1O94822 1766 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 CCDC7Q96M83 1385 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 WNK3Q9BYP7 1800 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 EXOC5O00471 708 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 AXIN1O15169 862 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 WNT7BP56706 349 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 TIMELESSQ9UNS1 1208 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
TNRC6B-208ENST00000489500 USP54Q70EL1 1684 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 USP31Q70CQ4 1352 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 CCNYL3P0C7X3 344 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 TMF1P82094 1093 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 EZH2Q15910 746 aaKnown RBP12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 SLC12A5Q9H2X9 1139 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 PCDHB15Q9Y5E8 787 aa12.32□□□□□ -0.44
TNRC6B-208ENST00000489500 ST20-MTHFSA0A0A6YYL1 179 aa12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 SMCPP49901 116 aaPredicted RBP12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 MTMR2Q13614 643 aa12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 CTC1Q2NKJ3 1217 aa12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 RSBN1LQ6PCB5 846 aaPredicted RBP12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 CAMKK2Q96RR4 588 aa12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 SBF2Q86WG5 1849 aa12.31□□□□□ -0.44
TNRC6B-208ENST00000489500 LRP5O75197 1615 aa12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 R3HDM1Q15032 1099 aaKnown RBP12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 NME9Q86XW9 330 aa12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 COG3Q96JB2 828 aa12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 SLC24A3Q9HC58 644 aa12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 CLSPNQ9HAW4 1339 aa12.3□□□□□ -0.44
TNRC6B-208ENST00000489500 LRRC37A3O60309 1634 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 NFAT5O94916 1531 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 PDE4DQ08499 809 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 PTPRNQ16849 979 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 HPS1Q92902 700 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 NLRP2Q9NX02 1062 aa12.29□□□□□ -0.44
TNRC6B-208ENST00000489500 RGPD3A6NKT7 1758 aaPredicted RBP12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 RGPD4Q7Z3J3 1758 aa12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 EVA1BQ9NVM1 165 aa12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 RREB1Q92766 1687 aa12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 FAM208AQ9UK61 1670 aaKnown RBP12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 A0A1W2PP64 1363 aa12.28□□□□□ -0.44
TNRC6B-208ENST00000489500 PLSCR1O15162 318 aa12.27□□□□□ -0.45
TNRC6B-208ENST00000489500 SPTLC1O15269 473 aa12.27□□□□□ -0.45
TNRC6B-208ENST00000489500 GJA5P36382 358 aa12.27□□□□□ -0.45
TNRC6B-208ENST00000489500 CD163L1Q9NR16 1453 aa12.27□□□□□ -0.45
TNRC6B-208ENST00000489500 SPDYE5A6NIY4 337 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 IL2RBP14784 551 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 AMPHP49418 695 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 SH3BP2P78314 561 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 DIXDC1Q155Q3 683 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 ANKRD24Q8TF21 1146 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 TESK2Q96S53 571 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 PCGF6Q9BYE7 350 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 USP47Q96K76 1375 aa12.26□□□□□ -0.45
TNRC6B-208ENST00000489500 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 PEAK1Q9H792 1746 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 SIAH2O43255 324 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 KCNH2Q12809 1159 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 RIC3Q7Z5B4 369 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 UNC93B1Q9H1C4 597 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 ANKRD36BQ8N2N9 1353 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 BCL9O00512 1426 aa12.25□□□□□ -0.45
TNRC6B-208ENST00000489500 ALDH1A1P00352 501 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 LINC01559Q495D7 138 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 DESI1Q6ICB0 168 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 EHBP1Q8NDI1 1231 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 IP6K1Q92551 441 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 BAP1Q92560 729 aa12.24□□□□□ -0.45
TNRC6B-208ENST00000489500 TNS2Q63HR2 1409 aa12.23□□□□□ -0.45
TNRC6B-208ENST00000489500 MARCH10Q8NA82 808 aaPredicted RBP12.23□□□□□ -0.45
TNRC6B-208ENST00000489500 PPP1R1BQ9UD71 204 aaPredicted RBP12.23□□□□□ -0.45
TNRC6B-208ENST00000489500 SMG6Q86US8 1419 aaKnown RBP12.22□□□□□ -0.45
TNRC6B-208ENST00000489500 CSPP1Q1MSJ5 1256 aa12.22□□□□□ -0.45
TNRC6B-208ENST00000489500 SPON1Q9HCB6 807 aa12.22□□□□□ -0.45
TNRC6B-208ENST00000489500 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
TNRC6B-208ENST00000489500 LYPD8Q6UX82 237 aa12.21□□□□□ -0.45
TNRC6B-208ENST00000489500 LTV1Q96GA3 475 aaPredicted RBP12.21□□□□□ -0.45
TNRC6B-208ENST00000489500 ZBTB3Q9H5J0 574 aa12.21□□□□□ -0.45
TNRC6B-208ENST00000489500 ATP13A2Q9NQ11 1180 aa12.21□□□□□ -0.45
TNRC6B-208ENST00000489500 LIMD1Q9UGP4 676 aa12.21□□□□□ -0.45
TNRC6B-208ENST00000489500 HMGB2P26583 209 aaKnown RBP12.2□□□□□ -0.46
TNRC6B-208ENST00000489500 MYSM1Q5VVJ2 828 aa12.2□□□□□ -0.46
TNRC6B-208ENST00000489500 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
TNRC6B-208ENST00000489500 NHSQ6T4R5 1651 aa12.19□□□□□ -0.46
TNRC6B-208ENST00000489500 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
TNRC6B-208ENST00000489500 HOXC9P31274 260 aa12.19□□□□□ -0.46
TNRC6B-208ENST00000489500 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
TNRC6B-208ENST00000489500 MAP3K19Q56UN5 1328 aa12.18□□□□□ -0.46
TNRC6B-208ENST00000489500 KCNQ2O43526 872 aa12.18□□□□□ -0.46
TNRC6B-208ENST00000489500 DDX54Q8TDD1 881 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms