RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 GPC2Q8N158 579 aa15.21■□□□□ 0.03
USP11-210ENST00000489030 AIDAQ96BJ3 306 aa15.21■□□□□ 0.03
USP11-210ENST00000489030 CFAP53Q96M91 514 aa15.21■□□□□ 0.03
USP11-210ENST00000489030 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
USP11-210ENST00000489030 ANP32CO43423 234 aa15.2■□□□□ 0.02
USP11-210ENST00000489030 TAF7Q15545 349 aaPredicted RBP15.2■□□□□ 0.02
USP11-210ENST00000489030 DEFB115Q30KQ5 88 aa15.2■□□□□ 0.02
USP11-210ENST00000489030 SUSD4Q5VX71 490 aa15.2■□□□□ 0.02
USP11-210ENST00000489030 PSMD1Q99460 953 aa15.2■□□□□ 0.02
USP11-210ENST00000489030 RGL2O15211 777 aa15.19■□□□□ 0.02
USP11-210ENST00000489030 GTF2E1P29083 439 aaPredicted RBP15.19■□□□□ 0.02
USP11-210ENST00000489030 ALDH1B1P30837 517 aa15.19■□□□□ 0.02
USP11-210ENST00000489030 PNMA8AQ86V59 439 aaPredicted RBP15.19■□□□□ 0.02
USP11-210ENST00000489030 ZBTB3Q9H5J0 574 aa15.19■□□□□ 0.02
USP11-210ENST00000489030 DDX21Q9NR30 783 aaKnown RBP eCLIP15.19■□□□□ 0.02
USP11-210ENST00000489030 ABT1Q9ULW3 272 aaKnown RBP15.19■□□□□ 0.02
USP11-210ENST00000489030 NUDCQ9Y266 331 aa15.19■□□□□ 0.02
USP11-210ENST00000489030 RRP7AQ9Y3A4 280 aaKnown RBP15.19■□□□□ 0.02
USP11-210ENST00000489030 MAP3K15Q6ZN16 1313 aa15.18■□□□□ 0.02
USP11-210ENST00000489030 MYL6BP14649 208 aa15.18■□□□□ 0.02
USP11-210ENST00000489030 EIF4A1P60842 406 aaKnown RBP15.18■□□□□ 0.02
USP11-210ENST00000489030 RALBP1Q15311 655 aa15.18■□□□□ 0.02
USP11-210ENST00000489030 CST9Q5W186 159 aa15.18■□□□□ 0.02
USP11-210ENST00000489030 HTATSF1O43719 755 aaKnown RBP15.17■□□□□ 0.02
USP11-210ENST00000489030 HOXA10P31260 410 aaPredicted RBP15.17■□□□□ 0.02
USP11-210ENST00000489030 CYP4F22Q6NT55 531 aa15.17■□□□□ 0.02
USP11-210ENST00000489030 LARGE2Q8N3Y3 721 aa15.17■□□□□ 0.02
USP11-210ENST00000489030 JDP2Q8WYK2 163 aa15.17■□□□□ 0.02
USP11-210ENST00000489030 ABHD8Q96I13 439 aa15.17■□□□□ 0.02
USP11-210ENST00000489030 TSKSQ9UJT2 592 aa15.17■□□□□ 0.02
USP11-210ENST00000489030 LAMB4A4D0S4 1761 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 NUP98P52948 1817 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 NTSR2O95665 410 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 EIF6P56537 245 aaKnown RBP15.16■□□□□ 0.02
USP11-210ENST00000489030 GRM1Q13255 1194 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 ZNF34Q8IZ26 560 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 RIC1Q4ADV7 1423 aa15.16■□□□□ 0.02
USP11-210ENST00000489030 PPEF1O14829 653 aaPredicted RBP15.15■□□□□ 0.02
USP11-210ENST00000489030 AOC3Q16853 763 aa15.15■□□□□ 0.02
USP11-210ENST00000489030 LRP10Q7Z4F1 713 aa15.15■□□□□ 0.02
USP11-210ENST00000489030 RPGRQ92834 1020 aaKnown RBP15.15■□□□□ 0.02
USP11-210ENST00000489030 CAPNS2Q96L46 248 aa15.15■□□□□ 0.02
USP11-210ENST00000489030 PLEKHF1Q96S99 279 aa15.15■□□□□ 0.02
USP11-210ENST00000489030 PRKRIP1Q9H875 184 aaPredicted RBP15.15■□□□□ 0.02
USP11-210ENST00000489030 KDM3BQ7LBC6 1761 aa15.15■□□□□ 0.02
USP11-210ENST00000489030 AOC2O75106 756 aa15.14■□□□□ 0.01
USP11-210ENST00000489030 ANXA1P04083 346 aa15.14■□□□□ 0.01
USP11-210ENST00000489030 PROSER3Q2NL68 480 aa15.14■□□□□ 0.01
USP11-210ENST00000489030 FAM161AQ3B820 660 aa15.14■□□□□ 0.01
USP11-210ENST00000489030 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
USP11-210ENST00000489030 NYXQ9GZU5 481 aa15.14■□□□□ 0.01
USP11-210ENST00000489030 SHTN1A0MZ66 631 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 LMOD1P29536 600 aaPredicted RBP15.13■□□□□ 0.01
USP11-210ENST00000489030 PDIA6Q15084 440 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 KIF6Q6ZMV9 814 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 ZNF428Q96B54 188 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 CRAMP1Q96RY5 1269 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 DLG5Q8TDM6 1919 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 THSD7BQ9C0I4 1608 aa15.13■□□□□ 0.01
USP11-210ENST00000489030 PPIP5K2O43314 1243 aa15.12■□□□□ 0.01
USP11-210ENST00000489030 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
USP11-210ENST00000489030 CC2D2BQ6DHV5 1058 aa15.12■□□□□ 0.01
USP11-210ENST00000489030 DLK2Q6UY11 383 aa15.12■□□□□ 0.01
USP11-210ENST00000489030 NIM1KQ8IY84 436 aa15.12■□□□□ 0.01
USP11-210ENST00000489030 RBM17Q96I25 401 aaKnown RBP15.12■□□□□ 0.01
USP11-210ENST00000489030 IBTKQ9P2D0 1353 aaPredicted RBP15.11■□□□□ 0.01
USP11-210ENST00000489030 GMPSP49915 693 aaPredicted RBP15.11■□□□□ 0.01
USP11-210ENST00000489030 CXCL9Q07325 125 aa15.11■□□□□ 0.01
USP11-210ENST00000489030 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
USP11-210ENST00000489030 GPR101Q96P66 508 aaPredicted RBP15.11■□□□□ 0.01
USP11-210ENST00000489030 GLIS2Q9BZE0 524 aaPredicted RBP15.11■□□□□ 0.01
USP11-210ENST00000489030 GPRC5DQ9NZD1 345 aa15.11■□□□□ 0.01
USP11-210ENST00000489030 TLL2Q9Y6L7 1015 aa15.11■□□□□ 0.01
USP11-210ENST00000489030 ABCC4O15439 1325 aa15.11■□□□□ 0.01
USP11-210ENST00000489030 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
USP11-210ENST00000489030 NFE2L2Q16236 605 aa15.1■□□□□ 0.01
USP11-210ENST00000489030 USP50Q70EL3 339 aaPredicted RBP15.1■□□□□ 0.01
USP11-210ENST00000489030 ZIC5Q96T25 663 aa15.1■□□□□ 0.01
USP11-210ENST00000489030 ATP6V0A2Q9Y487 856 aa15.1■□□□□ 0.01
USP11-210ENST00000489030 MYBBP1AQ9BQG0 1328 aaKnown RBP15.1■□□□□ 0.01
USP11-210ENST00000489030 HCLS1P14317 486 aaPredicted RBP15.09■□□□□ 0.01
USP11-210ENST00000489030 TRPM4Q8TD43 1214 aa15.09■□□□□ 0.01
USP11-210ENST00000489030 PNISRQ8TF01 805 aaKnown RBP15.09■□□□□ 0.01
USP11-210ENST00000489030 CCDC85CA6NKD9 419 aa15.08■□□□□ 0
USP11-210ENST00000489030 RAD17O75943 681 aa15.08■□□□□ 0
USP11-210ENST00000489030 CELF2O95319 508 aaKnown RBP15.08■□□□□ 0
USP11-210ENST00000489030 EIF2S2P20042 333 aaKnown RBP15.08■□□□□ 0
USP11-210ENST00000489030 SAPCD2Q86UD0 394 aa15.08■□□□□ 0
USP11-210ENST00000489030 TRPM7Q96QT4 1865 aa15.08■□□□□ 0
USP11-210ENST00000489030 YDJCA8MPS7 323 aa15.07■□□□□ 0
USP11-210ENST00000489030 SLC10A5Q5PT55 438 aa15.07■□□□□ 0
USP11-210ENST00000489030 NECTIN2Q92692 538 aa15.07■□□□□ 0
USP11-210ENST00000489030 UTP14AQ9BVJ6 771 aaKnown RBP15.07■□□□□ 0
USP11-210ENST00000489030 RTFDC1Q9BY42 306 aaPredicted RBP15.07■□□□□ 0
USP11-210ENST00000489030 ADARB2Q9NS39 739 aaKnown RBP15.07■□□□□ 0
USP11-210ENST00000489030 ZNRF3Q9ULT6 936 aa15.07■□□□□ 0
USP11-210ENST00000489030 COL4A1P02462 1669 aa15.06■□□□□ 0
USP11-210ENST00000489030 SLC34A2O95436 690 aa15.06■□□□□ 0
USP11-210ENST00000489030 ECE1P42892 770 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms