RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 POTECB2RU33 542 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 HOXB7P09629 217 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 HOXA10P31260 410 aaPredicted RBP15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 APLP1P51693 650 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 FSTL1Q12841 308 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 TCIRG1Q13488 830 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 ZNF428Q96B54 188 aa15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
CCHCR1-215ENST00000488920 ELL2O00472 640 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 TCERG1O14776 1098 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 DDNO94850 711 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 HSP90AB3PQ58FF7 597 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 SLC10A5Q5PT55 438 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 NLRP10Q86W26 655 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 SYNE4Q8N205 404 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 IFT57Q9NWB7 429 aa15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 DBF4Q9UBU7 674 aaPredicted RBP15.51■□□□□ 0.07
CCHCR1-215ENST00000488920 GNAI1P63096 354 aa15.5■□□□□ 0.07
CCHCR1-215ENST00000488920 ANKRD13DQ6ZTN6 518 aa15.5■□□□□ 0.07
CCHCR1-215ENST00000488920 SMC1BQ8NDV3 1235 aa15.5■□□□□ 0.07
CCHCR1-215ENST00000488920 CRAMP1Q96RY5 1269 aa15.5■□□□□ 0.07
CCHCR1-215ENST00000488920 NUP98P52948 1817 aa15.5■□□□□ 0.07
CCHCR1-215ENST00000488920 HCLS1P14317 486 aaPredicted RBP15.49■□□□□ 0.07
CCHCR1-215ENST00000488920 SLC51AQ86UW1 340 aa15.49■□□□□ 0.07
CCHCR1-215ENST00000488920 PLBD2Q8NHP8 589 aa15.49■□□□□ 0.07
CCHCR1-215ENST00000488920 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
CCHCR1-215ENST00000488920 TRMT112Q9UI30 125 aaKnown RBP15.49■□□□□ 0.07
CCHCR1-215ENST00000488920 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 PPEF1O14829 653 aaPredicted RBP15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 HTRA3P83110 453 aa15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 CC2D2BQ6DHV5 1058 aa15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 C8orf58Q8NAV2 365 aa15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 RIC1Q4ADV7 1423 aa15.48■□□□□ 0.07
CCHCR1-215ENST00000488920 ATP5J2-PTCD1G3V325 749 aa15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 ANP32CO43423 234 aa15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 IARSP41252 1262 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 DNAJC5GQ8N7S2 189 aa15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 PSMD1Q99460 953 aa15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 MRS2Q9HD23 443 aa15.47■□□□□ 0.07
CCHCR1-215ENST00000488920 SH3TC1Q8TE82 1336 aa15.46■□□□□ 0.07
CCHCR1-215ENST00000488920 CACNA1SQ13698 1873 aa15.46■□□□□ 0.06
CCHCR1-215ENST00000488920 CCDC88AQ3V6T2 1871 aa15.46■□□□□ 0.06
CCHCR1-215ENST00000488920 TIAM2Q8IVF5 1701 aa15.46■□□□□ 0.06
CCHCR1-215ENST00000488920 RNF123Q5XPI4 1314 aa15.45■□□□□ 0.06
CCHCR1-215ENST00000488920 ZNF541Q9H0D2 1346 aa15.45■□□□□ 0.06
CCHCR1-215ENST00000488920 ISCA1Q9BUE6 129 aa15.45■□□□□ 0.06
CCHCR1-215ENST00000488920 PHAXQ9H814 394 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-215ENST00000488920 ABCC4O15439 1325 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 ARFGEF2Q9Y6D5 1785 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 FZD9O00144 591 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 GRIPAP1Q4V328 841 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 RIC3Q7Z5B4 369 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 WWC1Q8IX03 1113 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 TSPYL6Q8N831 410 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 JDP2Q8WYK2 163 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 TSR2Q969E8 191 aaKnown RBP15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 FAM89AQ96GI7 184 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 TMX4Q9H1E5 349 aaPredicted RBP15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 ATP6V0A2Q9Y487 856 aa15.44■□□□□ 0.06
CCHCR1-215ENST00000488920 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 BBOX1O75936 387 aa15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 POTEIP0CG38 1075 aa15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 POTEJP0CG39 1038 aa15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 GOLGA2Q08379 1002 aa15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 RTL5Q5HYW3 569 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 DDX46Q7L014 1031 aaKnown RBP15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 L3MBTL3Q96JM7 780 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-215ENST00000488920 IQCA1LA6NCM1 817 aa15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 CCDC27Q2M243 656 aa15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 CCDC30Q5VVM6 783 aa15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 LARGE2Q8N3Y3 721 aa15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 TAF1DQ9H5J8 278 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 WDR90Q96KV7 1748 aa15.42■□□□□ 0.06
CCHCR1-215ENST00000488920 TRIM28Q13263 835 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-215ENST00000488920 CHADLQ6NUI6 762 aa15.41■□□□□ 0.06
CCHCR1-215ENST00000488920 SP8Q8IXZ3 490 aa15.41■□□□□ 0.06
CCHCR1-215ENST00000488920 SALL2Q9Y467 1007 aaPredicted RBP15.41■□□□□ 0.06
CCHCR1-215ENST00000488920 GJA3Q9Y6H8 435 aa15.41■□□□□ 0.06
CCHCR1-215ENST00000488920 EIF6P56537 245 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 GRAPQ13588 217 aa15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 GPC2Q8N158 579 aa15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 GRAPLQ8TC17 118 aaPredicted RBP15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 MYD88Q99836 296 aa15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 HACL1Q9UJ83 578 aa15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 DICER1Q9UPY3 1922 aaKnown RBP15.4■□□□□ 0.06
CCHCR1-215ENST00000488920 IRS4O14654 1257 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 PPIP5K2O43314 1243 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 AOC3Q16853 763 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 DPP8Q6V1X1 898 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 NIM1KQ8IY84 436 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 MPNDQ8N594 471 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 KLRG1Q96E93 195 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 CHMP4AQ9BY43 222 aa15.39■□□□□ 0.05
CCHCR1-215ENST00000488920 EPHX2P34913 555 aa15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
CCHCR1-215ENST00000488920 LDHDQ86WU2 507 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms