RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 EIF6P56537 245 aaKnown RBP25.18■■□□□ 1.62
GGPS1-206ENST00000488594 NFE2L2Q16236 605 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 CNTROBQ8N137 903 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 PLEKHF1Q96S99 279 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 PRDM10Q9NQV6 1147 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 ADAMTSL1Q8N6G6 1762 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 ERBB4Q15303 1308 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 FOXN1O15353 648 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 TTLL7Q6ZT98 887 aa25.18■■□□□ 1.62
GGPS1-206ENST00000488594 KDM3BQ7LBC6 1761 aa25.17■■□□□ 1.62
GGPS1-206ENST00000488594 MYL6BP14649 208 aa25.17■■□□□ 1.62
GGPS1-206ENST00000488594 GPTP24298 496 aa25.17■■□□□ 1.62
GGPS1-206ENST00000488594 RBM17Q96I25 401 aaKnown RBP25.17■■□□□ 1.62
GGPS1-206ENST00000488594 CRAMP1Q96RY5 1269 aa25.17■■□□□ 1.62
GGPS1-206ENST00000488594 ZBTB3Q9H5J0 574 aa25.17■■□□□ 1.62
GGPS1-206ENST00000488594 UBN2Q6ZU65 1347 aa25.16■■□□□ 1.62
GGPS1-206ENST00000488594 LMOD1P29536 600 aaPredicted RBP25.16■■□□□ 1.62
GGPS1-206ENST00000488594 CTCFP49711 727 aaPredicted RBP25.16■■□□□ 1.62
GGPS1-206ENST00000488594 SUSD4Q5VX71 490 aa25.16■■□□□ 1.62
GGPS1-206ENST00000488594 MAP1SQ66K74 1059 aaPredicted RBP25.16■■□□□ 1.62
GGPS1-206ENST00000488594 RASSF10A6NK89 507 aa25.15■■□□□ 1.62
GGPS1-206ENST00000488594 ZNF34Q8IZ26 560 aa25.15■■□□□ 1.62
GGPS1-206ENST00000488594 MAPK8IP3Q9UPT6 1336 aa25.14■■□□□ 1.62
GGPS1-206ENST00000488594 GIGYF2Q6Y7W6 1299 aaKnown RBP25.14■■□□□ 1.61
GGPS1-206ENST00000488594 PPP1R42Q7Z4L9 355 aa25.14■■□□□ 1.61
GGPS1-206ENST00000488594 LARGE2Q8N3Y3 721 aa25.14■■□□□ 1.61
GGPS1-206ENST00000488594 THUMPD2Q9BTF0 503 aaKnown RBP25.14■■□□□ 1.61
GGPS1-206ENST00000488594 GJA3Q9Y6H8 435 aa25.14■■□□□ 1.61
GGPS1-206ENST00000488594 PPEF1O14829 653 aaPredicted RBP25.13■■□□□ 1.61
GGPS1-206ENST00000488594 PARP10Q53GL7 1025 aa25.13■■□□□ 1.61
GGPS1-206ENST00000488594 TMX4Q9H1E5 349 aaPredicted RBP25.13■■□□□ 1.61
GGPS1-206ENST00000488594 NUP98P52948 1817 aa25.13■■□□□ 1.61
GGPS1-206ENST00000488594 NTSR2O95665 410 aa25.12■■□□□ 1.61
GGPS1-206ENST00000488594 DEFB115Q30KQ5 88 aa25.12■■□□□ 1.61
GGPS1-206ENST00000488594 WBP1LQ9NX94 342 aa25.12■■□□□ 1.61
GGPS1-206ENST00000488594 DLG5Q8TDM6 1919 aa25.11■■□□□ 1.61
GGPS1-206ENST00000488594 NLRP3Q96P20 1036 aa25.1■■□□□ 1.61
GGPS1-206ENST00000488594 VPS33BQ9H267 617 aa25.1■■□□□ 1.61
GGPS1-206ENST00000488594 COL4A5P29400 1685 aa25.09■■□□□ 1.61
GGPS1-206ENST00000488594 SCNN1DP51172 638 aa25.09■■□□□ 1.61
GGPS1-206ENST00000488594 NIM1KQ8IY84 436 aa25.09■■□□□ 1.61
GGPS1-206ENST00000488594 DDX21Q9NR30 783 aaKnown RBP eCLIP25.09■■□□□ 1.61
GGPS1-206ENST00000488594 TSPYL4Q9UJ04 414 aa25.09■■□□□ 1.61
GGPS1-206ENST00000488594 ABT1Q9ULW3 272 aaKnown RBP25.09■■□□□ 1.61
GGPS1-206ENST00000488594 MAP2K1Q02750 393 aaPredicted RBP25.08■■□□□ 1.61
GGPS1-206ENST00000488594 USP50Q70EL3 339 aaPredicted RBP25.08■■□□□ 1.61
GGPS1-206ENST00000488594 SLC10A5Q5PT55 438 aa25.07■■□□□ 1.6
GGPS1-206ENST00000488594 UTP14AQ9BVJ6 771 aaKnown RBP25.07■■□□□ 1.6
GGPS1-206ENST00000488594 BABAM1Q9NWV8 329 aa25.07■■□□□ 1.6
GGPS1-206ENST00000488594 ATP6V0A2Q9Y487 856 aa25.07■■□□□ 1.6
GGPS1-206ENST00000488594 EPS15P42566 896 aa25.06■■□□□ 1.6
GGPS1-206ENST00000488594 C3orf67Q6ZVT6 689 aa25.06■■□□□ 1.6
GGPS1-206ENST00000488594 WDR33Q9C0J8 1336 aaKnown RBP25.06■■□□□ 1.6
GGPS1-206ENST00000488594 TCERG1O14776 1098 aaKnown RBP25.05■■□□□ 1.6
GGPS1-206ENST00000488594 PPIP5K2O43314 1243 aa25.05■■□□□ 1.6
GGPS1-206ENST00000488594 LRP10Q7Z4F1 713 aa25.05■■□□□ 1.6
GGPS1-206ENST00000488594 SUPT20HQ8NEM7 779 aa25.05■■□□□ 1.6
GGPS1-206ENST00000488594 LBX1P52954 281 aa25.05■■□□□ 1.6
GGPS1-206ENST00000488594 PDIA6Q15084 440 aa25.05■■□□□ 1.6
GGPS1-206ENST00000488594 LTBP1Q14766 1721 aa25.04■■□□□ 1.6
GGPS1-206ENST00000488594 EIF2S2P20042 333 aaKnown RBP25.03■■□□□ 1.6
GGPS1-206ENST00000488594 ECE1P42892 770 aa25.03■■□□□ 1.6
GGPS1-206ENST00000488594 AOC3Q16853 763 aa25.03■■□□□ 1.6
GGPS1-206ENST00000488594 HSP90AB3PQ58FF7 597 aa25.03■■□□□ 1.6
GGPS1-206ENST00000488594 BBOX1O75936 387 aa25.02■■□□□ 1.6
GGPS1-206ENST00000488594 RIPK4P57078 832 aa25.02■■□□□ 1.6
GGPS1-206ENST00000488594 LMOD3Q0VAK6 560 aa25.02■■□□□ 1.6
GGPS1-206ENST00000488594 RTFDC1Q9BY42 306 aaPredicted RBP25.02■■□□□ 1.6
GGPS1-206ENST00000488594 ADARB2Q9NS39 739 aaKnown RBP25.02■■□□□ 1.6
GGPS1-206ENST00000488594 GPRC5DQ9NZD1 345 aa25.02■■□□□ 1.6
GGPS1-206ENST00000488594 ZNRF3Q9ULT6 936 aa25.02■■□□□ 1.6
GGPS1-206ENST00000488594 ABCC4O15439 1325 aa25.01■■□□□ 1.59
GGPS1-206ENST00000488594 SLC51AQ86UW1 340 aa25.01■■□□□ 1.59
GGPS1-206ENST00000488594 HSPA8P11142 646 aaKnown RBP25■■□□□ 1.59
GGPS1-206ENST00000488594 PROSER3Q2NL68 480 aa24.99■■□□□ 1.59
GGPS1-206ENST00000488594 DPP8Q6V1X1 898 aaPredicted RBP24.99■■□□□ 1.59
GGPS1-206ENST00000488594 SP8Q8IXZ3 490 aa24.99■■□□□ 1.59
GGPS1-206ENST00000488594 CAPNS2Q96L46 248 aa24.99■■□□□ 1.59
GGPS1-206ENST00000488594 CXCL9Q07325 125 aa24.98■■□□□ 1.59
GGPS1-206ENST00000488594 PAXIP1Q6ZW49 1069 aaPredicted RBP24.98■■□□□ 1.59
GGPS1-206ENST00000488594 BEGAINQ9BUH8 593 aa24.98■■□□□ 1.59
GGPS1-206ENST00000488594 CDHR2Q9BYE9 1310 aa24.98■■□□□ 1.59
GGPS1-206ENST00000488594 CST9Q5W186 159 aa24.97■■□□□ 1.59
GGPS1-206ENST00000488594 COPS6Q7L5N1 327 aa24.97■■□□□ 1.59
GGPS1-206ENST00000488594 NLRP10Q86W26 655 aa24.97■■□□□ 1.59
GGPS1-206ENST00000488594 MPNDQ8N594 471 aa24.97■■□□□ 1.59
GGPS1-206ENST00000488594 TRAF5O00463 557 aa24.96■■□□□ 1.59
GGPS1-206ENST00000488594 ANXA1P04083 346 aa24.96■■□□□ 1.59
GGPS1-206ENST00000488594 FMR1Q06787 632 aaKnown RBP eCLIP24.96■■□□□ 1.59
GGPS1-206ENST00000488594 DDX46Q7L014 1031 aaKnown RBP24.96■■□□□ 1.59
GGPS1-206ENST00000488594 TLL2Q9Y6L7 1015 aa24.96■■□□□ 1.59
GGPS1-206ENST00000488594 SH3TC1Q8TE82 1336 aa24.96■■□□□ 1.59
GGPS1-206ENST00000488594 TMPOP42166 694 aaKnown RBP24.95■■□□□ 1.59
GGPS1-206ENST00000488594 KIAA2012Q0VF49 1180 aa24.95■■□□□ 1.59
GGPS1-206ENST00000488594 TCIRG1Q13488 830 aa24.95■■□□□ 1.59
GGPS1-206ENST00000488594 XAGE3Q8WTP9 111 aa24.95■■□□□ 1.59
GGPS1-206ENST00000488594 GPR101Q96P66 508 aaPredicted RBP24.95■■□□□ 1.59
GGPS1-206ENST00000488594 TRMT112Q9UI30 125 aaKnown RBP24.95■■□□□ 1.59
GGPS1-206ENST00000488594 THSD7BQ9C0I4 1608 aa24.95■■□□□ 1.58
GGPS1-206ENST00000488594 HCLS1P14317 486 aaPredicted RBP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms