RNA–Protein interactions for RNA: ENST00000488428.1

TRAF5-206, Transcript of TNF receptor associated factor 5, humanhuman

TSL 5

Gene TRAF5, Length 905 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-206ENST00000488428 SOGA3Q5TF21 947 aa22.16■■□□□ 1.14
TRAF5-206ENST00000488428 C16orf71Q8IYS4 520 aaPredicted RBP22.16■■□□□ 1.14
TRAF5-206ENST00000488428 UTP14AQ9BVJ6 771 aaKnown RBP22.16■■□□□ 1.14
TRAF5-206ENST00000488428 MRS2Q9HD23 443 aa22.16■■□□□ 1.14
TRAF5-206ENST00000488428 IFT57Q9NWB7 429 aa22.16■■□□□ 1.14
TRAF5-206ENST00000488428 HOXB7P09629 217 aa22.15■■□□□ 1.14
TRAF5-206ENST00000488428 ALDH1B1P30837 517 aa22.15■■□□□ 1.14
TRAF5-206ENST00000488428 GNAI1P63096 354 aa22.15■■□□□ 1.14
TRAF5-206ENST00000488428 SLC51AQ86UW1 340 aa22.15■■□□□ 1.14
TRAF5-206ENST00000488428 SYNE4Q8N205 404 aa22.15■■□□□ 1.14
TRAF5-206ENST00000488428 RPGRQ92834 1020 aaKnown RBP22.15■■□□□ 1.14
TRAF5-206ENST00000488428 TCIRG1Q13488 830 aa22.14■■□□□ 1.13
TRAF5-206ENST00000488428 NLRP10Q86W26 655 aa22.14■■□□□ 1.13
TRAF5-206ENST00000488428 DBF4Q9UBU7 674 aaPredicted RBP22.14■■□□□ 1.13
TRAF5-206ENST00000488428 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
TRAF5-206ENST00000488428 CALD1Q05682 793 aaKnown RBP22.13■■□□□ 1.13
TRAF5-206ENST00000488428 C8orf58Q8NAV2 365 aa22.13■■□□□ 1.13
TRAF5-206ENST00000488428 ZNF277Q9NRM2 450 aaPredicted RBP22.13■■□□□ 1.13
TRAF5-206ENST00000488428 HSP90AB3PQ58FF7 597 aa22.12■■□□□ 1.13
TRAF5-206ENST00000488428 RIC1Q4ADV7 1423 aa22.12■■□□□ 1.13
TRAF5-206ENST00000488428 HCLS1P14317 486 aaPredicted RBP22.11■■□□□ 1.13
TRAF5-206ENST00000488428 HOXA10P31260 410 aaPredicted RBP22.11■■□□□ 1.13
TRAF5-206ENST00000488428 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
TRAF5-206ENST00000488428 ANKRD13DQ6ZTN6 518 aa22.11■■□□□ 1.13
TRAF5-206ENST00000488428 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
TRAF5-206ENST00000488428 RBM46Q8TBY0 533 aaKnown RBP22.11■■□□□ 1.13
TRAF5-206ENST00000488428 LAMB2P55268 1798 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 ATP5J2-PTCD1G3V325 749 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 DPY19L2Q6NUT2 758 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 RTKN2Q8IZC4 609 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 TSR2Q969E8 191 aaKnown RBP22.1■■□□□ 1.13
TRAF5-206ENST00000488428 RBM17Q96I25 401 aaKnown RBP22.1■■□□□ 1.13
TRAF5-206ENST00000488428 NLRP3Q96P20 1036 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 HYPKQ9NX55 129 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 TRMT112Q9UI30 125 aaKnown RBP22.1■■□□□ 1.13
TRAF5-206ENST00000488428 CEP350Q5VT06 3117 aa22.1■■□□□ 1.13
TRAF5-206ENST00000488428 POTECB2RU33 542 aa22.09■■□□□ 1.13
TRAF5-206ENST00000488428 VEGFAP15692 232 aaPredicted RBP22.09■■□□□ 1.13
TRAF5-206ENST00000488428 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
TRAF5-206ENST00000488428 PHAXQ9H814 394 aaKnown RBP22.09■■□□□ 1.13
TRAF5-206ENST00000488428 DDNO94850 711 aaPredicted RBP22.08■■□□□ 1.13
TRAF5-206ENST00000488428 WWC1Q8IX03 1113 aa22.08■■□□□ 1.13
TRAF5-206ENST00000488428 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
TRAF5-206ENST00000488428 SALL2Q9Y467 1007 aaPredicted RBP22.08■■□□□ 1.13
TRAF5-206ENST00000488428 WDR90Q96KV7 1748 aa22.07■■□□□ 1.12
TRAF5-206ENST00000488428 PPEF1O14829 653 aaPredicted RBP22.07■■□□□ 1.12
TRAF5-206ENST00000488428 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
TRAF5-206ENST00000488428 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
TRAF5-206ENST00000488428 TAF1P21675 1872 aa22.06■■□□□ 1.12
TRAF5-206ENST00000488428 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
TRAF5-206ENST00000488428 IARSP41252 1262 aaKnown RBP22.05■■□□□ 1.12
TRAF5-206ENST00000488428 RTL5Q5HYW3 569 aaPredicted RBP22.05■■□□□ 1.12
TRAF5-206ENST00000488428 ZNF541Q9H0D2 1346 aa22.05■■□□□ 1.12
TRAF5-206ENST00000488428 FSTL1Q12841 308 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 CCDC27Q2M243 656 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 RIC3Q7Z5B4 369 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 FAM89AQ96GI7 184 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 ABCC4O15439 1325 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 RNF123Q5XPI4 1314 aa22.04■■□□□ 1.12
TRAF5-206ENST00000488428 APLP1P51693 650 aa22.03■■□□□ 1.12
TRAF5-206ENST00000488428 HTRA3P83110 453 aa22.03■■□□□ 1.12
TRAF5-206ENST00000488428 SMC1BQ8NDV3 1235 aa22.03■■□□□ 1.12
TRAF5-206ENST00000488428 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
TRAF5-206ENST00000488428 GOLGA2Q08379 1002 aa22.02■■□□□ 1.12
TRAF5-206ENST00000488428 CC2D2BQ6DHV5 1058 aa22.02■■□□□ 1.12
TRAF5-206ENST00000488428 PSMD1Q99460 953 aa22.02■■□□□ 1.12
TRAF5-206ENST00000488428 COL4A5P29400 1685 aa22.01■■□□□ 1.11
TRAF5-206ENST00000488428 CCDC30Q5VVM6 783 aa22.01■■□□□ 1.11
TRAF5-206ENST00000488428 FAM9BQ8IZU0 186 aa22.01■■□□□ 1.11
TRAF5-206ENST00000488428 MYD88Q99836 296 aa22■■□□□ 1.11
TRAF5-206ENST00000488428 ATP6V0A2Q9Y487 856 aa22■■□□□ 1.11
TRAF5-206ENST00000488428 POTEIP0CG38 1075 aa21.99■■□□□ 1.11
TRAF5-206ENST00000488428 POTEJP0CG39 1038 aa21.99■■□□□ 1.11
TRAF5-206ENST00000488428 DDX46Q7L014 1031 aaKnown RBP21.99■■□□□ 1.11
TRAF5-206ENST00000488428 FZD9O00144 591 aa21.98■■□□□ 1.11
TRAF5-206ENST00000488428 TWISTNBQ3B726 338 aaPredicted RBP21.98■■□□□ 1.11
TRAF5-206ENST00000488428 JARID2Q92833 1246 aaPredicted RBP21.98■■□□□ 1.11
TRAF5-206ENST00000488428 BBOX1O75936 387 aa21.97■■□□□ 1.11
TRAF5-206ENST00000488428 TRIM28Q13263 835 aaKnown RBP21.97■■□□□ 1.11
TRAF5-206ENST00000488428 LARGE2Q8N3Y3 721 aa21.97■■□□□ 1.11
TRAF5-206ENST00000488428 JDP2Q8WYK2 163 aa21.97■■□□□ 1.11
TRAF5-206ENST00000488428 TMX4Q9H1E5 349 aaPredicted RBP21.97■■□□□ 1.11
TRAF5-206ENST00000488428 IL16Q14005 1332 aa21.97■■□□□ 1.11
TRAF5-206ENST00000488428 COL4A1P02462 1669 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 IRS4O14654 1257 aaPredicted RBP21.96■■□□□ 1.11
TRAF5-206ENST00000488428 GRAPQ13588 217 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 GRIPAP1Q4V328 841 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 DNAJC5GQ8N7S2 189 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 GRAPLQ8TC17 118 aaPredicted RBP21.96■■□□□ 1.11
TRAF5-206ENST00000488428 L3MBTL3Q96JM7 780 aaPredicted RBP21.96■■□□□ 1.11
TRAF5-206ENST00000488428 MAP3K2Q9Y2U5 619 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
TRAF5-206ENST00000488428 AOC3Q16853 763 aa21.95■■□□□ 1.1
TRAF5-206ENST00000488428 G2E3Q7L622 706 aa21.95■■□□□ 1.1
TRAF5-206ENST00000488428 SP8Q8IXZ3 490 aa21.95■■□□□ 1.1
TRAF5-206ENST00000488428 SCN4AP35499 1836 aa21.94■■□□□ 1.1
TRAF5-206ENST00000488428 PPIP5K2O43314 1243 aa21.94■■□□□ 1.1
TRAF5-206ENST00000488428 DDX58O95786 925 aaKnown RBP21.94■■□□□ 1.1
TRAF5-206ENST00000488428 SF3B3Q15393 1217 aaKnown RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms