RNA–Protein interactions for RNA: ENST00000488179.6

SSR2-212, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 5

Gene SSR2, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-212ENST00000488179 CCDC93Q567U6 631 aa10.81□□□□□ -0.68
SSR2-212ENST00000488179 RTL5Q5HYW3 569 aaPredicted RBP10.81□□□□□ -0.68
SSR2-212ENST00000488179 LRP10Q7Z4F1 713 aa10.81□□□□□ -0.68
SSR2-212ENST00000488179 FAM9BQ8IZU0 186 aa10.81□□□□□ -0.68
SSR2-212ENST00000488179 NLRP3Q96P20 1036 aa10.81□□□□□ -0.68
SSR2-212ENST00000488179 IFT57Q9NWB7 429 aa10.81□□□□□ -0.68
SSR2-212ENST00000488179 TRMT112Q9UI30 125 aaKnown RBP10.81□□□□□ -0.68
SSR2-212ENST00000488179 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 GLTPD2A6NH11 291 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 ATP5J2-PTCD1G3V325 749 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 NTSR2O95665 410 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 HCLS1P14317 486 aaPredicted RBP10.8□□□□□ -0.68
SSR2-212ENST00000488179 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 ANKRD13DQ6ZTN6 518 aa10.8□□□□□ -0.68
SSR2-212ENST00000488179 TSR2Q969E8 191 aaKnown RBP10.8□□□□□ -0.68
SSR2-212ENST00000488179 ZNF277Q9NRM2 450 aaPredicted RBP10.8□□□□□ -0.68
SSR2-212ENST00000488179 KLRG2A4D1S0 409 aaPredicted RBP10.79□□□□□ -0.68
SSR2-212ENST00000488179 HSPA6P17066 643 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 TCIRG1Q13488 830 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 RIC3Q7Z5B4 369 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 SYNE4Q8N205 404 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 C8orf58Q8NAV2 365 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 RBM17Q96I25 401 aaKnown RBP10.79□□□□□ -0.68
SSR2-212ENST00000488179 TMX4Q9H1E5 349 aaPredicted RBP10.79□□□□□ -0.68
SSR2-212ENST00000488179 HYPKQ9NX55 129 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 TAF1P21675 1872 aa10.79□□□□□ -0.68
SSR2-212ENST00000488179 HOXB7P09629 217 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 ZNF853P0CG23 659 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 NLRP10Q86W26 655 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 VEGFAP15692 232 aaPredicted RBP10.78□□□□□ -0.68
SSR2-212ENST00000488179 RTKN2Q8IZC4 609 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 PLBD2Q8NHP8 589 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 C7orf43Q8WVR3 580 aa10.78□□□□□ -0.68
SSR2-212ENST00000488179 PHAXQ9H814 394 aaKnown RBP10.78□□□□□ -0.68
SSR2-212ENST00000488179 ZC3H4Q9UPT8 1303 aaKnown RBP10.78□□□□□ -0.68
SSR2-212ENST00000488179 DDNO94850 711 aaPredicted RBP10.77□□□□□ -0.69
SSR2-212ENST00000488179 FKBP4Q02790 459 aaKnown RBP eCLIP10.77□□□□□ -0.69
SSR2-212ENST00000488179 GOLGA2Q08379 1002 aa10.77□□□□□ -0.69
SSR2-212ENST00000488179 CRY2Q49AN0 593 aa10.77□□□□□ -0.69
SSR2-212ENST00000488179 WWC1Q8IX03 1113 aa10.77□□□□□ -0.69
SSR2-212ENST00000488179 TSPYL6Q8N831 410 aa10.77□□□□□ -0.69
SSR2-212ENST00000488179 FAM89AQ96GI7 184 aa10.77□□□□□ -0.69
SSR2-212ENST00000488179 LAMB2P55268 1798 aa10.76□□□□□ -0.69
SSR2-212ENST00000488179 PPEF1O14829 653 aaPredicted RBP10.76□□□□□ -0.69
SSR2-212ENST00000488179 CCDC30Q5VVM6 783 aa10.76□□□□□ -0.69
SSR2-212ENST00000488179 SLC51AQ86UW1 340 aa10.76□□□□□ -0.69
SSR2-212ENST00000488179 SH3TC1Q8TE82 1336 aa10.76□□□□□ -0.69
SSR2-212ENST00000488179 LTBP3Q9NS15 1303 aa10.76□□□□□ -0.69
SSR2-212ENST00000488179 IBTKQ9P2D0 1353 aaPredicted RBP10.76□□□□□ -0.69
SSR2-212ENST00000488179 IARSP41252 1262 aaKnown RBP10.75□□□□□ -0.69
SSR2-212ENST00000488179 DDX46Q7L014 1031 aaKnown RBP10.75□□□□□ -0.69
SSR2-212ENST00000488179 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
SSR2-212ENST00000488179 JDP2Q8WYK2 163 aa10.75□□□□□ -0.69
SSR2-212ENST00000488179 HOXA10P31260 410 aaPredicted RBP10.75□□□□□ -0.69
SSR2-212ENST00000488179 CRAMP1Q96RY5 1269 aa10.75□□□□□ -0.69
SSR2-212ENST00000488179 MYD88Q99836 296 aa10.75□□□□□ -0.69
SSR2-212ENST00000488179 STK31Q9BXU1 1019 aa10.75□□□□□ -0.69
SSR2-212ENST00000488179 ABCC4O15439 1325 aa10.74□□□□□ -0.69
SSR2-212ENST00000488179 DDX58O95786 925 aaKnown RBP10.74□□□□□ -0.69
SSR2-212ENST00000488179 HTRA3P83110 453 aa10.74□□□□□ -0.69
SSR2-212ENST00000488179 TWISTNBQ3B726 338 aaPredicted RBP10.74□□□□□ -0.69
SSR2-212ENST00000488179 LARGE2Q8N3Y3 721 aa10.74□□□□□ -0.69
SSR2-212ENST00000488179 JARID2Q92833 1246 aaPredicted RBP10.74□□□□□ -0.69
SSR2-212ENST00000488179 CHMP4AQ9BY43 222 aa10.74□□□□□ -0.69
SSR2-212ENST00000488179 GJA3Q9Y6H8 435 aa10.74□□□□□ -0.69
SSR2-212ENST00000488179 APLP1P51693 650 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 CCDC27Q2M243 656 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 SLC10A5Q5PT55 438 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 CC2D2BQ6DHV5 1058 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 SMC1BQ8NDV3 1235 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 RNF123Q5XPI4 1314 aa10.73□□□□□ -0.69
SSR2-212ENST00000488179 KCNA4P22459 653 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 FSTL1Q12841 308 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 EAPPQ56P03 285 aaPredicted RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 MAP3K2Q9Y2U5 619 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 RIC1Q4ADV7 1423 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 ZNF541Q9H0D2 1346 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 IRS4O14654 1257 aaPredicted RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 PPIP5K2O43314 1243 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 SLC4A2P04920 1241 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 EIF6P56537 245 aaKnown RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 DPP8Q6V1X1 898 aaPredicted RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 CCDC85AQ96PX6 553 aaPredicted RBP10.72□□□□□ -0.69
SSR2-212ENST00000488179 PSMD1Q99460 953 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 CLEC11AQ9Y240 323 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 ATP6V0A2Q9Y487 856 aa10.72□□□□□ -0.69
SSR2-212ENST00000488179 WDR90Q96KV7 1748 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 PI4KAP2A4QPH2 592 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 POTECB2RU33 542 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 BBOX1O75936 387 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 POTEIP0CG38 1075 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 POTEJP0CG39 1038 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 AOC3Q16853 763 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 MPNDQ8N594 471 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 PI4KAP1Q8N8J0 262 aa10.71□□□□□ -0.69
SSR2-212ENST00000488179 FANCIQ9NVI1 1328 aa10.7□□□□□ -0.7
SSR2-212ENST00000488179 IQCA1LA6NCM1 817 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms