RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 DNM1Q05193 864 aaKnown RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 MSL1Q68DK7 614 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 CCDC8Q9H0W5 538 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 NPHP3Q7Z494 1330 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 PRG4Q92954 1404 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 GOLGA8AA7E2F4 631 aa9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 PCF11O94913 1555 aaKnown RBP9.48□□□□□ -0.89
MCF2L2-212ENST00000488149 IARSP41252 1262 aaKnown RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 AMPD3Q01432 767 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 HOOK3Q86VS8 718 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 CCDC121Q6ZUS5 278 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 SPATA24Q86W54 205 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 AQRO60306 1485 aaKnown RBP eCLIP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 ATF3P18847 181 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 PIBF1Q8WXW3 757 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 HDXQ7Z353 690 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 RNF41Q9H4P4 317 aaPredicted RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 RALGAPBQ86X10 1494 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 FLIIQ13045 1269 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 RBM42Q9BTD8 480 aaKnown RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 FSD2A1L4K1 749 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 AKR1B10O60218 316 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 TRIM21P19474 475 aaKnown RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 ZNF287Q9HBT7 754 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 RNF216Q9NWF9 866 aaPredicted RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 RMND1Q9NWS8 449 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 SEC63Q9UGP8 760 aaKnown RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 GRIN2BQ13224 1484 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 PDE1AP54750 535 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 TMEM266Q2M3C6 531 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 GBP6Q6ZN66 633 aa9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.47□□□□□ -0.89
MCF2L2-212ENST00000488149 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 IQCA1Q86XH1 822 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 ARFGAP2Q8N6H7 521 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 FBF1Q8TES7 1133 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 CEP63Q96MT8 703 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 IFIT3O14879 490 aaKnown RBP9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 ZNF445P59923 1031 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 CEP57Q86XR8 500 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 CCDC61Q9Y6R9 512 aa9.46□□□□□ -0.89
MCF2L2-212ENST00000488149 METTL24Q5JXM2 366 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 ATP2C2O75185 946 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 SYT10Q6XYQ8 523 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 RBSNQ9H1K0 784 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC194A0A1B0GVG4 234 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 NECAB1Q8N987 351 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 KRBA2Q6ZNG9 492 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 DDX12PQ92771 950 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 GTF3C6Q969F1 213 aa9.46□□□□□ -0.9
MCF2L2-212ENST00000488149 EPRSP07814 1512 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 A0A087WZG4 1122 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 ZNF76P36508 570 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 ANKRD44Q8N8A2 993 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 TCP11L1Q9NUJ3 509 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC96Q2M329 555 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 TACC1O75410 805 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 CTNNBL1Q8WYA6 563 aaPredicted RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 SCAF11Q99590 1463 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 KRT86O43790 486 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 BMP15O95972 392 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 KRT83P78385 493 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC6Q16204 474 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 HYPKQ9NX55 129 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 PRPF4BQ13523 1007 aaKnown RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 KIAA0753Q2KHM9 967 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 STMN4Q9H169 189 aaPredicted RBP9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 NLRP5P59047 1200 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 MAP3K12Q12852 859 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC82Q8N4S0 544 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 FAM76AQ8TAV0 307 aa9.45□□□□□ -0.9
MCF2L2-212ENST00000488149 MINDY4BA8MYZ0 360 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 LMOD1P29536 600 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 METAP2P50579 478 aaKnown RBP eCLIP9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC40Q4G0X9 1142 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 TSHZ3Q63HK5 1081 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 PAF1Q8N7H5 531 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 SELENOOQ9BVL4 669 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 UBA7P41226 1012 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 PPP1R42Q7Z4L9 355 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 CATIPQ7Z7H3 387 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 TRIM47Q96LD4 638 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 CCDC114Q96M63 670 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 SEC24BO95487 1268 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 CALML4Q96GE6 196 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 RTL1A6NKG5 1358 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 U2AF2P26368 475 aaKnown RBP eCLIP9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 CETN1Q12798 172 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 RSRC1Q96IZ7 334 aaKnown RBP9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 DBF4Q9UBU7 674 aaPredicted RBP9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 A0A1B0GUA9 196 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 USP5P45974 858 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 EVCP57679 992 aa9.44□□□□□ -0.9
MCF2L2-212ENST00000488149 B4GALNT4Q76KP1 1039 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms