RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 MSTNO14793 375 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 UQCRHP07919 91 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 RASA1P20936 1047 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 MCM5P33992 734 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 PHLDB3Q6NSJ2 640 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 TRMT44Q8IYL2 757 aaKnown RBP5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 SCARF2Q96GP6 870 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 TMEM51Q9NW97 253 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 FAM13BQ9NYF5 915 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 CEP170Q5SW79 1584 aa5.93□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZIC2O95409 532 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 MSNP26038 577 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 TNNT2P45379 298 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 ARID5BQ14865 1188 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 DUSP27Q5VZP5 1158 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 GAS2L3Q86XJ1 694 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 OGFOD1Q8N543 542 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZNF592Q92610 1267 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 PDLIM2Q96JY6 352 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 UPF2Q9HAU5 1272 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 NOL7Q9UMY1 257 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 DOLKQ9UPQ8 538 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 ANKRD30AQ9BXX3 1397 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 CAMSAP2Q08AD1 1489 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 ATP5J2-PTCD1G3V325 749 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 LZTS3O60299 673 aaPredicted RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 PPFIA3O75145 1194 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 MARSP56192 900 aaKnown RBP5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 EML3Q32P44 896 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 SASS6Q6UVJ0 657 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 SLC10A4Q96EP9 437 aa5.92□□□□□ -1.46
CDC42BPA-213ENST00000488131 BMP2P12643 396 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 OXLD1Q5BKU9 147 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 ANKMY2Q8IV38 441 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 ZNF594Q96JF6 807 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 PCDHGA11Q9Y5H2 935 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 CGNL1Q0VF96 1302 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 COL17A1Q9UMD9 1497 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 ADGBQ8N7X0 1667 aa5.91□□□□□ -1.46
CDC42BPA-213ENST00000488131 NASPP49321 788 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 DPYDQ12882 1025 aa5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 C6orf118Q5T5N4 469 aa5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 LARP1Q6PKG0 1096 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 CLEC17AQ6ZS10 378 aa5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 KCTD15Q96SI1 283 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 KLF16Q9BXK1 252 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 CHMP4BQ9H444 224 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 R3HCC1Q9Y3T6 440 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 PLEKHH1Q9ULM0 1364 aa5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 NKTRP30414 1462 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-213ENST00000488131 SENP3-EIF4A1A0A087X0R7 540 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 GTF2F1P35269 517 aaKnown RBP eCLIP5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 DAPK1P53355 1430 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 SLC20A2Q08357 652 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 TRMT2AQ8IZ69 625 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 Q8N3U1 123 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 GBP4Q96PP9 640 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 RRP7BPQ9NSQ0 103 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 DNAAF2Q9NVR5 837 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 NOD1Q9Y239 953 aa5.9□□□□□ -1.47
CDC42BPA-213ENST00000488131 TRPM1Q7Z4N2 1603 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 FAM135AQ9P2D6 1515 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 SOBPA7XYQ1 873 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 HSP90AB1P08238 724 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 SCNN1AP37088 669 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 GRM5P41594 1212 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 SCTRP47872 440 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 RBM25P49756 843 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 RAB15P59190 212 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 GTF2IP78347 998 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 KCNA1Q09470 495 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 PDE3AQ14432 1141 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 INTS6LQ5JSJ4 861 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 SMC5Q8IY18 1101 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 FAM200AQ8TCP9 573 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 ANP32BQ92688 251 aaKnown RBP5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 PRDM10Q9NQV6 1147 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZKSCAN5Q9Y2L8 839 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 PCDHB11Q9Y5F2 797 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 ITSN2Q9NZM3 1697 aa5.89□□□□□ -1.47
CDC42BPA-213ENST00000488131 IGHDP01880 384 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZNF445P59923 1031 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 NBPF20Q3BBV1 942 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 LCE3BQ5TA77 95 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 RNF20Q5VTR2 975 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 ZNF385CQ66K41 422 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 SIX5Q8N196 739 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 LARGE2Q8N3Y3 721 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 SVOPQ8N4V2 548 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 SNX21Q969T3 373 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 TSEN34Q9BSV6 310 aaKnown RBP5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 IVNS1ABPQ9Y6Y0 642 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 NESP48681 1621 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 KDM5DQ9BY66 1539 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 POLA1P09884 1462 aaPredicted RBP5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 YEATS2Q9ULM3 1422 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 BTBD11A6QL63 1104 aa5.88□□□□□ -1.47
CDC42BPA-213ENST00000488131 ERVH48-1M5A8F1 160 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms