RNA–Protein interactions for RNA: ENST00000487927.5

TRIM8-204, Transcript of tripartite motif containing 8, humanhuman

TSL 3

Gene TRIM8, Length 761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM8-204ENST00000487927 DNAJC5GQ8N7S2 189 aa26.45■■□□□ 1.82
TRIM8-204ENST00000487927 SMC1BQ8NDV3 1235 aa26.44■■□□□ 1.82
TRIM8-204ENST00000487927 LAS1LQ9Y4W2 734 aaKnown RBP26.44■■□□□ 1.82
TRIM8-204ENST00000487927 HOXA10P31260 410 aaPredicted RBP26.42■■□□□ 1.82
TRIM8-204ENST00000487927 HTRA3P83110 453 aa26.42■■□□□ 1.82
TRIM8-204ENST00000487927 PARP10Q53GL7 1025 aa26.42■■□□□ 1.82
TRIM8-204ENST00000487927 C3orf67Q6ZVT6 689 aa26.42■■□□□ 1.82
TRIM8-204ENST00000487927 COPS6Q7L5N1 327 aa26.42■■□□□ 1.82
TRIM8-204ENST00000487927 DDNO94850 711 aaPredicted RBP26.41■■□□□ 1.82
TRIM8-204ENST00000487927 PPP1R42Q7Z4L9 355 aa26.41■■□□□ 1.82
TRIM8-204ENST00000487927 RTKN2Q8IZC4 609 aa26.41■■□□□ 1.82
TRIM8-204ENST00000487927 XAGE3Q8WTP9 111 aa26.41■■□□□ 1.82
TRIM8-204ENST00000487927 DDX21Q9NR30 783 aaKnown RBP eCLIP26.41■■□□□ 1.82
TRIM8-204ENST00000487927 ZNF277Q9NRM2 450 aaPredicted RBP26.41■■□□□ 1.82
TRIM8-204ENST00000487927 LAMB2P55268 1798 aa26.41■■□□□ 1.82
TRIM8-204ENST00000487927 AIMP1Q12904 312 aaKnown RBP26.4■■□□□ 1.82
TRIM8-204ENST00000487927 RPGRQ92834 1020 aaKnown RBP26.39■■□□□ 1.82
TRIM8-204ENST00000487927 CFAP44Q96MT7 982 aa26.39■■□□□ 1.82
TRIM8-204ENST00000487927 SLC51AQ86UW1 340 aa26.38■■□□□ 1.81
TRIM8-204ENST00000487927 CHPF2Q9P2E5 772 aa26.38■■□□□ 1.81
TRIM8-204ENST00000487927 SCN4AP35499 1836 aa26.37■■□□□ 1.81
TRIM8-204ENST00000487927 SYNE4Q8N205 404 aa26.37■■□□□ 1.81
TRIM8-204ENST00000487927 UTP14AQ9BVJ6 771 aaKnown RBP26.37■■□□□ 1.81
TRIM8-204ENST00000487927 APAF1O14727 1248 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 HOXB7P09629 217 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 ZNF853P0CG23 659 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 SLC10A5Q5PT55 438 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 HDGFL1Q5TGJ6 251 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 CRAMP1Q96RY5 1269 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 PSMD1Q99460 953 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 MBIPQ9NS73 344 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 ZNF541Q9H0D2 1346 aa26.36■■□□□ 1.81
TRIM8-204ENST00000487927 IARSP41252 1262 aaKnown RBP26.35■■□□□ 1.81
TRIM8-204ENST00000487927 HSP90AB3PQ58FF7 597 aa26.35■■□□□ 1.81
TRIM8-204ENST00000487927 NLRP10Q86W26 655 aa26.35■■□□□ 1.81
TRIM8-204ENST00000487927 RBM17Q96I25 401 aaKnown RBP26.35■■□□□ 1.81
TRIM8-204ENST00000487927 COL4A5P29400 1685 aa26.34■■□□□ 1.81
TRIM8-204ENST00000487927 TCIRG1Q13488 830 aa26.34■■□□□ 1.81
TRIM8-204ENST00000487927 CC2D2BQ6DHV5 1058 aa26.34■■□□□ 1.81
TRIM8-204ENST00000487927 L3MBTL3Q96JM7 780 aaPredicted RBP26.34■■□□□ 1.81
TRIM8-204ENST00000487927 NLRP3Q96P20 1036 aa26.34■■□□□ 1.81
TRIM8-204ENST00000487927 RNF123Q5XPI4 1314 aa26.34■■□□□ 1.81
TRIM8-204ENST00000487927 POTEIP0CG38 1075 aa26.33■■□□□ 1.81
TRIM8-204ENST00000487927 POTEJP0CG39 1038 aa26.33■■□□□ 1.81
TRIM8-204ENST00000487927 YTHDC1Q96MU7 727 aaKnown RBP26.33■■□□□ 1.81
TRIM8-204ENST00000487927 DUSP27Q5VZP5 1158 aa26.32■■□□□ 1.8
TRIM8-204ENST00000487927 FZD9O00144 591 aa26.31■■□□□ 1.8
TRIM8-204ENST00000487927 PPEF1O14829 653 aaPredicted RBP26.31■■□□□ 1.8
TRIM8-204ENST00000487927 CCDC184Q52MB2 194 aa26.31■■□□□ 1.8
TRIM8-204ENST00000487927 KLRG1Q96E93 195 aa26.31■■□□□ 1.8
TRIM8-204ENST00000487927 DBF4Q9UBU7 674 aaPredicted RBP26.31■■□□□ 1.8
TRIM8-204ENST00000487927 DDX60Q8IY21 1712 aaKnown RBP26.31■■□□□ 1.8
TRIM8-204ENST00000487927 TAF1P21675 1872 aa26.3■■□□□ 1.8
TRIM8-204ENST00000487927 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
TRIM8-204ENST00000487927 TCERG1O14776 1098 aaKnown RBP26.29■■□□□ 1.8
TRIM8-204ENST00000487927 HCLS1P14317 486 aaPredicted RBP26.29■■□□□ 1.8
TRIM8-204ENST00000487927 PLBD2Q8NHP8 589 aa26.29■■□□□ 1.8
TRIM8-204ENST00000487927 ABCC4O15439 1325 aa26.29■■□□□ 1.8
TRIM8-204ENST00000487927 IQCA1LA6NCM1 817 aa26.28■■□□□ 1.8
TRIM8-204ENST00000487927 CHADLQ6NUI6 762 aa26.28■■□□□ 1.8
TRIM8-204ENST00000487927 TAF1DQ9H5J8 278 aaPredicted RBP26.28■■□□□ 1.8
TRIM8-204ENST00000487927 TRMT112Q9UI30 125 aaKnown RBP26.28■■□□□ 1.8
TRIM8-204ENST00000487927 GRIPAP1Q4V328 841 aa26.27■■□□□ 1.8
TRIM8-204ENST00000487927 ANKRD13DQ6ZTN6 518 aa26.27■■□□□ 1.8
TRIM8-204ENST00000487927 SH3TC1Q8TE82 1336 aa26.27■■□□□ 1.8
TRIM8-204ENST00000487927 ADAMTSL1Q8N6G6 1762 aa26.27■■□□□ 1.8
TRIM8-204ENST00000487927 GNAI1P63096 354 aa26.26■■□□□ 1.79
TRIM8-204ENST00000487927 ZNF428Q96B54 188 aa26.26■■□□□ 1.79
TRIM8-204ENST00000487927 ISCA1Q9BUE6 129 aa26.26■■□□□ 1.79
TRIM8-204ENST00000487927 HYPKQ9NX55 129 aa26.26■■□□□ 1.79
TRIM8-204ENST00000487927 JMYQ8N9B5 988 aa26.25■■□□□ 1.79
TRIM8-204ENST00000487927 JDP2Q8WYK2 163 aa26.25■■□□□ 1.79
TRIM8-204ENST00000487927 ATP6V0A2Q9Y487 856 aa26.25■■□□□ 1.79
TRIM8-204ENST00000487927 CALD1Q05682 793 aaKnown RBP26.24■■□□□ 1.79
TRIM8-204ENST00000487927 ELL2O00472 640 aaPredicted RBP26.23■■□□□ 1.79
TRIM8-204ENST00000487927 GPC2Q8N158 579 aa26.23■■□□□ 1.79
TRIM8-204ENST00000487927 MRS2Q9HD23 443 aa26.23■■□□□ 1.79
TRIM8-204ENST00000487927 LTBP1Q14766 1721 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 ATP5J2-PTCD1G3V325 749 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 LDHDQ86WU2 507 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 LARGE2Q8N3Y3 721 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 C8orf58Q8NAV2 365 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 HACL1Q9UJ83 578 aa26.22■■□□□ 1.79
TRIM8-204ENST00000487927 PHAXQ9H814 394 aaKnown RBP26.21■■□□□ 1.79
TRIM8-204ENST00000487927 LRRC37AA6NMS7 1700 aa26.21■■□□□ 1.79
TRIM8-204ENST00000487927 BBOX1O75936 387 aa26.2■■□□□ 1.78
TRIM8-204ENST00000487927 EPHX2P34913 555 aa26.2■■□□□ 1.78
TRIM8-204ENST00000487927 FAM89AQ96GI7 184 aa26.2■■□□□ 1.78
TRIM8-204ENST00000487927 COL4A1P02462 1669 aa26.19■■□□□ 1.78
TRIM8-204ENST00000487927 EIF6P56537 245 aaKnown RBP26.19■■□□□ 1.78
TRIM8-204ENST00000487927 GRAPQ13588 217 aa26.19■■□□□ 1.78
TRIM8-204ENST00000487927 DDX46Q7L014 1031 aaKnown RBP26.19■■□□□ 1.78
TRIM8-204ENST00000487927 SP8Q8IXZ3 490 aa26.19■■□□□ 1.78
TRIM8-204ENST00000487927 GRAPLQ8TC17 118 aaPredicted RBP26.19■■□□□ 1.78
TRIM8-204ENST00000487927 RTFDC1Q9BY42 306 aaPredicted RBP26.19■■□□□ 1.78
TRIM8-204ENST00000487927 PASKQ96RG2 1323 aa26.18■■□□□ 1.78
TRIM8-204ENST00000487927 PPIP5K2O43314 1243 aa26.18■■□□□ 1.78
TRIM8-204ENST00000487927 TRIM28Q13263 835 aaKnown RBP26.18■■□□□ 1.78
TRIM8-204ENST00000487927 AOC3Q16853 763 aa26.18■■□□□ 1.78
TRIM8-204ENST00000487927 EAPPQ56P03 285 aaPredicted RBP26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms