RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 RNF112Q9ULX5 631 aa8.41□□□□□ -1.06
UBR3-211ENST00000487689 GPC6Q9Y625 555 aaPredicted RBP8.41□□□□□ -1.06
UBR3-211ENST00000487689 LARGE2Q8N3Y3 721 aa8.4□□□□□ -1.06
UBR3-211ENST00000487689 MKRN1Q9UHC7 482 aaKnown RBP8.4□□□□□ -1.06
UBR3-211ENST00000487689 TBC1D8BQ0IIM8 1120 aa8.39□□□□□ -1.07
UBR3-211ENST00000487689 PROSER2Q86WR7 435 aaPredicted RBP8.39□□□□□ -1.07
UBR3-211ENST00000487689 TNS4Q8IZW8 715 aa8.39□□□□□ -1.07
UBR3-211ENST00000487689 RHPN1Q8TCX5 695 aa8.39□□□□□ -1.07
UBR3-211ENST00000487689 JPH1Q9HDC5 661 aaPredicted RBP8.39□□□□□ -1.07
UBR3-211ENST00000487689 BRD7Q9NPI1 651 aa8.39□□□□□ -1.07
UBR3-211ENST00000487689 ANKIB1Q9P2G1 1089 aa8.39□□□□□ -1.07
UBR3-211ENST00000487689 PSMA6P60900 246 aaKnown RBP8.38□□□□□ -1.07
UBR3-211ENST00000487689 TBCELQ5QJ74 424 aa8.38□□□□□ -1.07
UBR3-211ENST00000487689 OGFOD1Q8N543 542 aa8.38□□□□□ -1.07
UBR3-211ENST00000487689 NUDT8Q8WV74 236 aa8.38□□□□□ -1.07
UBR3-211ENST00000487689 CEP63Q96MT8 703 aa8.38□□□□□ -1.07
UBR3-211ENST00000487689 PAX4O43316 350 aa8.37□□□□□ -1.07
UBR3-211ENST00000487689 SH3PXD2AQ5TCZ1 1133 aa8.37□□□□□ -1.07
UBR3-211ENST00000487689 FMR1NBQ8N0W7 255 aaPredicted RBP8.37□□□□□ -1.07
UBR3-211ENST00000487689 BHMTQ93088 406 aa8.37□□□□□ -1.07
UBR3-211ENST00000487689 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
UBR3-211ENST00000487689 RASA1P20936 1047 aa8.36□□□□□ -1.07
UBR3-211ENST00000487689 LARP1Q6PKG0 1096 aaKnown RBP8.36□□□□□ -1.07
UBR3-211ENST00000487689 DMRTC2Q8IXT2 367 aaPredicted RBP8.36□□□□□ -1.07
UBR3-211ENST00000487689 GLMNQ92990 594 aa8.36□□□□□ -1.07
UBR3-211ENST00000487689 ZNF594Q96JF6 807 aaPredicted RBP8.36□□□□□ -1.07
UBR3-211ENST00000487689 IGFLR1Q9H665 355 aa8.36□□□□□ -1.07
UBR3-211ENST00000487689 SLC6A14Q9UN76 642 aa8.36□□□□□ -1.07
UBR3-211ENST00000487689 KCNH4Q9UQ05 1017 aa8.36□□□□□ -1.07
UBR3-211ENST00000487689 COL17A1Q9UMD9 1497 aaPredicted RBP8.36□□□□□ -1.07
UBR3-211ENST00000487689 M0R2N6 131 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 COBLO75128 1261 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 TXKP42681 527 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 KCNQ4P56696 695 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 HIF1AQ16665 826 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 ADAMTS19Q8TE59 1207 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 CLUAP1Q96AJ1 413 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 HSH2DQ96JZ2 352 aa8.35□□□□□ -1.07
UBR3-211ENST00000487689 CALR3Q96L12 384 aaKnown RBP8.35□□□□□ -1.07
UBR3-211ENST00000487689 SFI1A8K8P3 1242 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 PPP1R12BO60237 982 aaPredicted RBP8.34□□□□□ -1.07
UBR3-211ENST00000487689 AFF1P51825 1210 aaKnown RBP8.34□□□□□ -1.07
UBR3-211ENST00000487689 EPHA4P54764 986 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 CLDN10P78369 228 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 C1orf53Q5VUE5 145 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 WFDC12Q8WWY7 111 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 UCN2Q96RP3 112 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 PCMTD2Q9NV79 361 aa8.34□□□□□ -1.07
UBR3-211ENST00000487689 IREB2P48200 963 aaKnown RBP8.33□□□□□ -1.08
UBR3-211ENST00000487689 TYRO3Q06418 890 aa8.33□□□□□ -1.08
UBR3-211ENST00000487689 SIX5Q8N196 739 aa8.33□□□□□ -1.08
UBR3-211ENST00000487689 TSPAN10Q9H1Z9 355 aaPredicted RBP8.33□□□□□ -1.08
UBR3-211ENST00000487689 TFIP11Q9UBB9 837 aaKnown RBP8.33□□□□□ -1.08
UBR3-211ENST00000487689 ZBTB7BO15156 539 aaPredicted RBP8.32□□□□□ -1.08
UBR3-211ENST00000487689 YBX3P16989 372 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBR3-211ENST00000487689 SEC13P55735 322 aa8.32□□□□□ -1.08
UBR3-211ENST00000487689 PSAPL1Q6NUJ1 521 aa8.32□□□□□ -1.08
UBR3-211ENST00000487689 HINFPQ9BQA5 517 aa8.32□□□□□ -1.08
UBR3-211ENST00000487689 KIAA1024Q9UPX6 916 aa8.32□□□□□ -1.08
UBR3-211ENST00000487689 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
UBR3-211ENST00000487689 NOS3P29474 1203 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 ILDR2Q71H61 639 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 TSEN2Q8NCE0 465 aaKnown RBP8.31□□□□□ -1.08
UBR3-211ENST00000487689 ZNF280CQ8ND82 737 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 CHMP7Q8WUX9 453 aaPredicted RBP8.31□□□□□ -1.08
UBR3-211ENST00000487689 FMNL2Q96PY5 1086 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 PHACTR1Q9C0D0 580 aa8.31□□□□□ -1.08
UBR3-211ENST00000487689 DNAJB12Q9NXW2 375 aaKnown RBP8.31□□□□□ -1.08
UBR3-211ENST00000487689 RGS9O75916 674 aaPredicted RBP8.3□□□□□ -1.08
UBR3-211ENST00000487689 SSTR4P31391 388 aa8.3□□□□□ -1.08
UBR3-211ENST00000487689 HIRAP54198 1017 aaPredicted RBP8.3□□□□□ -1.08
UBR3-211ENST00000487689 NAGPAQ9UK23 515 aa8.3□□□□□ -1.08
UBR3-211ENST00000487689 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
UBR3-211ENST00000487689 SCG3Q8WXD2 468 aaKnown RBP8.29□□□□□ -1.08
UBR3-211ENST00000487689 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
UBR3-211ENST00000487689 SUSD3Q96L08 255 aa8.29□□□□□ -1.08
UBR3-211ENST00000487689 MAFBQ9Y5Q3 323 aaPredicted RBP8.29□□□□□ -1.08
UBR3-211ENST00000487689 ATAD2Q6PL18 1390 aa8.28□□□□□ -1.08
UBR3-211ENST00000487689 A6NJR5 290 aa8.28□□□□□ -1.08
UBR3-211ENST00000487689 FBXO11Q86XK2 927 aa8.28□□□□□ -1.08
UBR3-211ENST00000487689 KRTAP4-7Q9BYR0 210 aa8.28□□□□□ -1.08
UBR3-211ENST00000487689 VRTNQ9H8Y1 702 aa8.28□□□□□ -1.08
UBR3-211ENST00000487689 IRAK1P51617 712 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 LCE1DQ5T752 114 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 MSL1Q68DK7 614 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 FNBP4Q8N3X1 1017 aaPredicted RBP8.27□□□□□ -1.09
UBR3-211ENST00000487689 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 NGLY1Q96IV0 654 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 PPP1R12CQ9BZL4 782 aa8.27□□□□□ -1.09
UBR3-211ENST00000487689 ALDH16A1Q8IZ83 802 aa8.26□□□□□ -1.09
UBR3-211ENST00000487689 STAG2Q8N3U4 1231 aa8.26□□□□□ -1.09
UBR3-211ENST00000487689 DTWD1Q8N5C7 304 aa8.26□□□□□ -1.09
UBR3-211ENST00000487689 FSTP19883 344 aa8.25□□□□□ -1.09
UBR3-211ENST00000487689 LMOD1P29536 600 aaPredicted RBP8.25□□□□□ -1.09
UBR3-211ENST00000487689 PNMA5Q96PV4 448 aa8.25□□□□□ -1.09
UBR3-211ENST00000487689 EPB42P16452 691 aa8.24□□□□□ -1.09
UBR3-211ENST00000487689 IGF2-ASQ6U949 168 aa8.24□□□□□ -1.09
UBR3-211ENST00000487689 EFCC1Q9HA90 598 aa8.24□□□□□ -1.09
UBR3-211ENST00000487689 CD97P48960 835 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms