RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 MS4A1P11836 297 aa16.87■□□□□ 0.29
COL4A6-207ENST00000487645 TRIM27P14373 513 aa16.87■□□□□ 0.29
COL4A6-207ENST00000487645 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.87■□□□□ 0.29
COL4A6-207ENST00000487645 CNBD1Q8NA66 436 aa16.87■□□□□ 0.29
COL4A6-207ENST00000487645 SRCIN1Q9C0H9 1055 aa16.87■□□□□ 0.29
COL4A6-207ENST00000487645 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
COL4A6-207ENST00000487645 FAM177BA6PVY3 158 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 NPHP1O15259 732 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 NTSR2O95665 410 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 GTF2E1P29083 439 aaPredicted RBP16.86■□□□□ 0.29
COL4A6-207ENST00000487645 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
COL4A6-207ENST00000487645 GCKRQ14397 625 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
COL4A6-207ENST00000487645 SLC10A5Q5PT55 438 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 PRR5LQ6MZQ0 368 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 ZBTB38Q8NAP3 1195 aaPredicted RBP16.86■□□□□ 0.29
COL4A6-207ENST00000487645 CD2APQ9Y5K6 639 aa16.86■□□□□ 0.29
COL4A6-207ENST00000487645 PCCAP05165 728 aaPredicted RBP16.85■□□□□ 0.29
COL4A6-207ENST00000487645 ST5P78524 1137 aa16.85■□□□□ 0.29
COL4A6-207ENST00000487645 INTS3Q68E01 1043 aaKnown RBP16.85■□□□□ 0.29
COL4A6-207ENST00000487645 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
COL4A6-207ENST00000487645 PPP1R1BQ9UD71 204 aaPredicted RBP16.85■□□□□ 0.29
COL4A6-207ENST00000487645 ABCC4O15439 1325 aa16.85■□□□□ 0.29
COL4A6-207ENST00000487645 H7C1W4 665 aa16.84■□□□□ 0.29
COL4A6-207ENST00000487645 HSP90B1P14625 803 aaKnown RBP16.84■□□□□ 0.29
COL4A6-207ENST00000487645 SH3TC1Q8TE82 1336 aa16.84■□□□□ 0.29
COL4A6-207ENST00000487645 ANKRD31Q8N7Z5 1873 aa16.84■□□□□ 0.29
COL4A6-207ENST00000487645 ERFEQ4G0M1 354 aa16.83■□□□□ 0.28
COL4A6-207ENST00000487645 NUTM1Q86Y26 1132 aa16.83■□□□□ 0.28
COL4A6-207ENST00000487645 DZIP1LQ8IYY4 767 aaKnown RBP16.83■□□□□ 0.28
COL4A6-207ENST00000487645 FAM89AQ96GI7 184 aa16.83■□□□□ 0.28
COL4A6-207ENST00000487645 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
COL4A6-207ENST00000487645 MYH3P11055 1940 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 SRCAPQ6ZRS2 3230 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 RIC1Q4ADV7 1423 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 C10orf71Q711Q0 1435 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 PDE6BP35913 854 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 TGFB2P61812 414 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 CLUAP1Q96AJ1 413 aa16.82■□□□□ 0.28
COL4A6-207ENST00000487645 CDHR2Q9BYE9 1310 aa16.81■□□□□ 0.28
COL4A6-207ENST00000487645 KLRG2A4D1S0 409 aaPredicted RBP16.81■□□□□ 0.28
COL4A6-207ENST00000487645 GRM8O00222 908 aa16.81■□□□□ 0.28
COL4A6-207ENST00000487645 PDE3AQ14432 1141 aa16.81■□□□□ 0.28
COL4A6-207ENST00000487645 FTSJ3Q8IY81 847 aaKnown RBP16.81■□□□□ 0.28
COL4A6-207ENST00000487645 C9orf78Q9NZ63 289 aaPredicted RBP16.81■□□□□ 0.28
COL4A6-207ENST00000487645 TNNQ9UQP3 1299 aa16.81■□□□□ 0.28
COL4A6-207ENST00000487645 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
COL4A6-207ENST00000487645 LAMB2P55268 1798 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 UTYO14607 1347 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 IRS4O14654 1257 aaPredicted RBP16.8■□□□□ 0.28
COL4A6-207ENST00000487645 PLIN1O60240 522 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 CASP7P55210 303 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 SYNE4Q8N205 404 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 CCDC24Q8N4L8 307 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 NLRP3Q96P20 1036 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 FHDC1Q9C0D6 1143 aaPredicted RBP16.8■□□□□ 0.28
COL4A6-207ENST00000487645 USP44Q9H0E7 712 aa16.8■□□□□ 0.28
COL4A6-207ENST00000487645 RTL5Q5HYW3 569 aaPredicted RBP16.79■□□□□ 0.28
COL4A6-207ENST00000487645 UBE3BQ7Z3V4 1068 aa16.79■□□□□ 0.28
COL4A6-207ENST00000487645 TMEM57Q8N5G2 664 aa16.79■□□□□ 0.28
COL4A6-207ENST00000487645 H0YIN7 160 aa16.78■□□□□ 0.28
COL4A6-207ENST00000487645 PDE8AO60658 829 aa16.78■□□□□ 0.28
COL4A6-207ENST00000487645 RLBP1P12271 317 aa16.78■□□□□ 0.28
COL4A6-207ENST00000487645 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
COL4A6-207ENST00000487645 RRP1P56182 461 aaKnown RBP16.78■□□□□ 0.28
COL4A6-207ENST00000487645 SYT17Q9BSW7 474 aa16.78■□□□□ 0.28
COL4A6-207ENST00000487645 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
COL4A6-207ENST00000487645 ABCC12Q96J65 1359 aa16.77■□□□□ 0.28
COL4A6-207ENST00000487645 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.28
COL4A6-207ENST00000487645 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
COL4A6-207ENST00000487645 JARID2Q92833 1246 aaPredicted RBP16.77■□□□□ 0.28
COL4A6-207ENST00000487645 PLA2G12BQ9BX93 195 aa16.77■□□□□ 0.28
COL4A6-207ENST00000487645 DLEC1Q9Y238 1755 aa16.77■□□□□ 0.27
COL4A6-207ENST00000487645 GNAI3P08754 354 aa16.76■□□□□ 0.27
COL4A6-207ENST00000487645 NBPF7P0C2Y1 421 aaPredicted RBP16.76■□□□□ 0.27
COL4A6-207ENST00000487645 SRGNP10124 158 aa16.76■□□□□ 0.27
COL4A6-207ENST00000487645 SF3B3Q15393 1217 aaKnown RBP16.76■□□□□ 0.27
COL4A6-207ENST00000487645 C2CD5Q86YS7 1000 aa16.76■□□□□ 0.27
COL4A6-207ENST00000487645 KLHL34Q8N239 644 aa16.76■□□□□ 0.27
COL4A6-207ENST00000487645 PANK1Q8TE04 598 aa16.76■□□□□ 0.27
COL4A6-207ENST00000487645 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
COL4A6-207ENST00000487645 A0A0G2JLW4 131 aa16.75■□□□□ 0.27
COL4A6-207ENST00000487645 KCNA3P22001 575 aa16.75■□□□□ 0.27
COL4A6-207ENST00000487645 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
COL4A6-207ENST00000487645 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
COL4A6-207ENST00000487645 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
COL4A6-207ENST00000487645 ZBTB7BO15156 539 aaPredicted RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 CENPBP07199 599 aaPredicted RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 NPR1P16066 1061 aa16.74■□□□□ 0.27
COL4A6-207ENST00000487645 DPEP1P16444 411 aa16.74■□□□□ 0.27
COL4A6-207ENST00000487645 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 MVPQ14764 893 aaKnown RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 STYK1Q6J9G0 422 aa16.74■□□□□ 0.27
COL4A6-207ENST00000487645 ITPRIPQ8IWB1 547 aa16.74■□□□□ 0.27
COL4A6-207ENST00000487645 CHMP4BQ9H444 224 aaKnown RBP16.74■□□□□ 0.27
COL4A6-207ENST00000487645 CSF1RP07333 972 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 CHRNA5P30532 468 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 ALDH1B1P30837 517 aa16.73■□□□□ 0.27
COL4A6-207ENST00000487645 CTSWP56202 376 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms