RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 BRIP1Q9BX63 1249 aa13.26□□□□□ -0.29
CDK11A-217ENST00000487462 CARD11Q9BXL7 1154 aa13.26□□□□□ -0.29
CDK11A-217ENST00000487462 SCN11AQ9UI33 1791 aa13.26□□□□□ -0.29
CDK11A-217ENST00000487462 METRNQ9UJH8 293 aa13.26□□□□□ -0.29
CDK11A-217ENST00000487462 TRAF5O00463 557 aa13.25□□□□□ -0.29
CDK11A-217ENST00000487462 PLCG2P16885 1265 aa13.25□□□□□ -0.29
CDK11A-217ENST00000487462 CCDC24Q8N4L8 307 aa13.25□□□□□ -0.29
CDK11A-217ENST00000487462 TESK2Q96S53 571 aa13.25□□□□□ -0.29
CDK11A-217ENST00000487462 PDZRN3Q9UPQ7 1066 aa13.25□□□□□ -0.29
CDK11A-217ENST00000487462 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
CDK11A-217ENST00000487462 CYP19A1P11511 503 aaPredicted RBP13.24□□□□□ -0.29
CDK11A-217ENST00000487462 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
CDK11A-217ENST00000487462 SOGA3Q5TF21 947 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 PRR5LQ6MZQ0 368 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 BICDL1Q6ZP65 573 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 NFATC2IPQ8NCF5 419 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 C7orf43Q8WVR3 580 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 ZNF277Q9NRM2 450 aaPredicted RBP13.24□□□□□ -0.29
CDK11A-217ENST00000487462 ZBTB1Q9Y2K1 713 aa13.24□□□□□ -0.29
CDK11A-217ENST00000487462 FZD9O00144 591 aa13.23□□□□□ -0.29
CDK11A-217ENST00000487462 CIAPIN1Q6FI81 312 aa13.23□□□□□ -0.29
CDK11A-217ENST00000487462 SAPCD2Q86UD0 394 aa13.23□□□□□ -0.29
CDK11A-217ENST00000487462 CNKSR1Q969H4 720 aa13.23□□□□□ -0.29
CDK11A-217ENST00000487462 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
CDK11A-217ENST00000487462 TBC1D9BQ66K14 1250 aa13.22□□□□□ -0.29
CDK11A-217ENST00000487462 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
CDK11A-217ENST00000487462 ZNF530Q6P9A1 599 aaPredicted RBP13.22□□□□□ -0.29
CDK11A-217ENST00000487462 GPC2Q8N158 579 aa13.22□□□□□ -0.29
CDK11A-217ENST00000487462 COL4A5P29400 1685 aa13.21□□□□□ -0.29
CDK11A-217ENST00000487462 SRGNP10124 158 aa13.21□□□□□ -0.29
CDK11A-217ENST00000487462 FKBP4Q02790 459 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDK11A-217ENST00000487462 ZIC5Q96T25 663 aa13.21□□□□□ -0.29
CDK11A-217ENST00000487462 OCEL1Q9H607 264 aa13.21□□□□□ -0.29
CDK11A-217ENST00000487462 HTTP42858 3142 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 ST20-MTHFSA0A0A6YYL1 179 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 MTHFSP49914 203 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 EIF4A2Q14240 407 aaKnown RBP13.2□□□□□ -0.3
CDK11A-217ENST00000487462 CCDC93Q567U6 631 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 OLFM4Q6UX06 510 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 HHIPL1Q96JK4 782 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 BRCA2P51587 3418 aa13.2□□□□□ -0.3
CDK11A-217ENST00000487462 CENPFP49454 3210 aa13.19□□□□□ -0.3
CDK11A-217ENST00000487462 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
CDK11A-217ENST00000487462 UBR2Q8IWV8 1755 aa13.19□□□□□ -0.3
CDK11A-217ENST00000487462 EPS15P42566 896 aa13.18□□□□□ -0.3
CDK11A-217ENST00000487462 SCNN1DP51172 638 aa13.18□□□□□ -0.3
CDK11A-217ENST00000487462 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
CDK11A-217ENST00000487462 PLEKHO1Q53GL0 409 aaPredicted RBP13.18□□□□□ -0.3
CDK11A-217ENST00000487462 NBPF15Q8N660 670 aa13.18□□□□□ -0.3
CDK11A-217ENST00000487462 COL6A3P12111 3177 aa13.18□□□□□ -0.3
CDK11A-217ENST00000487462 MRC1P22897 1456 aa13.17□□□□□ -0.3
CDK11A-217ENST00000487462 SNED1Q8TER0 1413 aa13.17□□□□□ -0.3
CDK11A-217ENST00000487462 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
CDK11A-217ENST00000487462 FXR1P51114 621 aaKnown RBP eCLIP13.17□□□□□ -0.3
CDK11A-217ENST00000487462 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
CDK11A-217ENST00000487462 IARSP41252 1262 aaKnown RBP13.16□□□□□ -0.3
CDK11A-217ENST00000487462 CNBD1Q8NA66 436 aa13.16□□□□□ -0.3
CDK11A-217ENST00000487462 POLKQ9UBT6 870 aa13.16□□□□□ -0.3
CDK11A-217ENST00000487462 G3V3G9 751 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 LMOD1P29536 600 aaPredicted RBP13.15□□□□□ -0.3
CDK11A-217ENST00000487462 EIF5P55010 431 aaKnown RBP13.15□□□□□ -0.3
CDK11A-217ENST00000487462 NOGQ13253 232 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 AMOTQ4VCS5 1084 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 USP50Q70EL3 339 aaPredicted RBP13.15□□□□□ -0.3
CDK11A-217ENST00000487462 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 CUL9Q8IWT3 2517 aa13.15□□□□□ -0.3
CDK11A-217ENST00000487462 CANXP27824 592 aaKnown RBP13.14□□□□□ -0.31
CDK11A-217ENST00000487462 SLC39A6Q13433 755 aa13.14□□□□□ -0.31
CDK11A-217ENST00000487462 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
CDK11A-217ENST00000487462 SAGE1Q9NXZ1 904 aa13.14□□□□□ -0.31
CDK11A-217ENST00000487462 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
CDK11A-217ENST00000487462 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
CDK11A-217ENST00000487462 ST5P78524 1137 aa13.13□□□□□ -0.31
CDK11A-217ENST00000487462 NEUROD1Q13562 356 aa13.13□□□□□ -0.31
CDK11A-217ENST00000487462 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
CDK11A-217ENST00000487462 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
CDK11A-217ENST00000487462 SYNE4Q8N205 404 aa13.13□□□□□ -0.31
CDK11A-217ENST00000487462 SPRYD3Q8NCJ5 442 aa13.12□□□□□ -0.31
CDK11A-217ENST00000487462 GLIS2Q9BZE0 524 aaPredicted RBP13.12□□□□□ -0.31
CDK11A-217ENST00000487462 SLC52A2Q9HAB3 445 aa13.12□□□□□ -0.31
CDK11A-217ENST00000487462 A0A087WZG4 1122 aa13.11□□□□□ -0.31
CDK11A-217ENST00000487462 FAM155AB1AL88 458 aaPredicted RBP13.11□□□□□ -0.31
CDK11A-217ENST00000487462 NPR1P16066 1061 aa13.11□□□□□ -0.31
CDK11A-217ENST00000487462 AEBP1Q8IUX7 1158 aa13.11□□□□□ -0.31
CDK11A-217ENST00000487462 JDP2Q8WYK2 163 aa13.11□□□□□ -0.31
CDK11A-217ENST00000487462 RANBP2P49792 3224 aaKnown RBP13.11□□□□□ -0.31
CDK11A-217ENST00000487462 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
CDK11A-217ENST00000487462 DLL1O00548 723 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 EIF6P56537 245 aaKnown RBP13.1□□□□□ -0.31
CDK11A-217ENST00000487462 VSIG10Q8N0Z9 540 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 FBXO22Q8NEZ5 403 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 SETDB2Q96T68 719 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 PSMD1Q99460 953 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 TBC1D2BQ9UPU7 963 aa13.1□□□□□ -0.31
CDK11A-217ENST00000487462 COLQQ9Y215 455 aaPredicted RBP13.1□□□□□ -0.31
CDK11A-217ENST00000487462 NPHP1O15259 732 aa13.09□□□□□ -0.31
CDK11A-217ENST00000487462 TRPA1O75762 1119 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms