RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 XRN1Q8IZH2 1706 aaKnown RBP7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 PTPRUQ92729 1446 aa7.86□□□□□ -1.15
R3HDM1-218ENST00000487294 CCDC125Q86Z20 511 aa7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 GPR161Q8N6U8 529 aaKnown RBP7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 KDF1Q8NAX2 398 aaPredicted RBP7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 CNTNAP3BQ96NU0 1288 aa7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 CNTNAP3Q9BZ76 1288 aa7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 CYLDQ9NQC7 956 aa7.85□□□□□ -1.15
R3HDM1-218ENST00000487294 RELBQ01201 579 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 PHTF2Q8N3S3 785 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 CCDC155Q8N6L0 562 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 AMOTL2Q9Y2J4 779 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 NHSL1Q5SYE7 1610 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 NRXN3Q9Y4C0 1643 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 MST1RQ04912 1400 aa7.84□□□□□ -1.15
R3HDM1-218ENST00000487294 ASXL1Q8IXJ9 1541 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 LAMC1P11047 1609 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 RAD21O60216 631 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 ADH1AP07327 375 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 RXRBP28702 533 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 SCTRP47872 440 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 ERVK-9P63128 1117 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 TSGA10IPQ3SY00 556 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 CCDC85AQ96PX6 553 aaPredicted RBP7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 COL25A1Q9BXS0 654 aaPredicted RBP7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 PCDHB11Q9Y5F2 797 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 PRAG1Q86YV5 1406 aa7.83□□□□□ -1.16
R3HDM1-218ENST00000487294 SLC35F4A4IF30 521 aa7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 FAM50AQ14320 339 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 C14orf37Q86TY3 774 aa7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 TMEM151AQ8N4L1 468 aa7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 LRRC59Q96AG4 307 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 CDCA7Q9BWT1 371 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 ZNF395Q9H8N7 513 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 ADGRL3Q9HAR2 1447 aa7.82□□□□□ -1.16
R3HDM1-218ENST00000487294 RASSF7Q02833 373 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 SEMA3FQ13275 785 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 MEX3CQ5U5Q3 659 aaKnown RBP7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 CC2D2BQ6DHV5 1058 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 KCTD17Q8N5Z5 321 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 CLUAP1Q96AJ1 413 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 ADAMTS8Q9UP79 889 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 SRCAPQ6ZRS2 3230 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 NUP155O75694 1391 aa7.81□□□□□ -1.16
R3HDM1-218ENST00000487294 AFF2P51816 1311 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 GDF11O95390 407 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 ITGA6P23229 1130 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 SOX11P35716 441 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 PTGIRP43119 386 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 CTSOP43234 321 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 SUZ12Q15022 739 aaKnown RBP7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 SLFNL1Q499Z3 407 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 ZNF385CQ66K41 422 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 SVOPQ8N4V2 548 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 INSM2Q96T92 566 aaPredicted RBP7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 METP08581 1390 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 PNPLA6Q8IY17 1366 aa7.8□□□□□ -1.16
R3HDM1-218ENST00000487294 ATP5J2-PTCD1G3V325 749 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 TRAK2O60296 914 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 SLURP2P0DP57 97 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 RBM6P78332 1123 aaKnown RBP7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 WWC1Q8IX03 1113 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 OSBPL3Q9H4L5 887 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 ALG2Q9H553 416 aa7.79□□□□□ -1.16
R3HDM1-218ENST00000487294 RGS12O14924 1447 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 PTCH1Q13635 1447 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 NEXMIFQ5QGS0 1516 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 SPHKAPQ2M3C7 1700 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 POM121CA8CG34 1229 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 RNFT1Q5M7Z0 435 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 SV2AQ7L0J3 742 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 RNF135Q8IUD6 432 aa7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 FNBP4Q8N3X1 1017 aaPredicted RBP7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 POLMQ9NP87 494 aaPredicted RBP7.78□□□□□ -1.16
R3HDM1-218ENST00000487294 C1orf167Q5SNV9 1468 aa7.77□□□□□ -1.17
R3HDM1-218ENST00000487294 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
R3HDM1-218ENST00000487294 ADAMTS19Q8TE59 1207 aa7.77□□□□□ -1.17
R3HDM1-218ENST00000487294 QTRT2Q9H974 415 aaKnown RBP7.77□□□□□ -1.17
R3HDM1-218ENST00000487294 NALCNQ8IZF0 1738 aa7.77□□□□□ -1.17
R3HDM1-218ENST00000487294 CDC14CA4D256 554 aa7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 PIK3CDO00329 1044 aa7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 FOXD4L5Q5VV16 416 aaPredicted RBP7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 VWA5B2Q8N398 1253 aa7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 NGLY1Q96IV0 654 aa7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 DOLKQ9UPQ8 538 aa7.76□□□□□ -1.17
R3HDM1-218ENST00000487294 COL22A1Q8NFW1 1626 aaPredicted RBP7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 A0A1W2PRU2 124 aa7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 C8orf37Q96NL8 207 aa7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 DNMT3AQ9Y6K1 912 aaPredicted RBP7.75□□□□□ -1.17
R3HDM1-218ENST00000487294 CLTCL1P53675 1640 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 ATAD2Q6PL18 1390 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 USP4Q13107 963 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 PLPP7Q8NBV4 271 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 HFM1A2PYH4 1435 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 RPGRIP1LQ68CZ1 1315 aa7.74□□□□□ -1.17
R3HDM1-218ENST00000487294 MYOM2P54296 1465 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms