RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 KIF3CO14782 793 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 LMNB1P20700 586 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 TCIRG1Q13488 830 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 CRY2Q49AN0 593 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 PARP10Q53GL7 1025 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 SYNE4Q8N205 404 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 UTP14AQ9BVJ6 771 aaKnown RBP20.53■□□□□ 0.88
GABPA-203ENST00000487266 PHAXQ9H814 394 aaKnown RBP20.53■□□□□ 0.88
GABPA-203ENST00000487266 NMRK2Q9NPI5 230 aa20.53■□□□□ 0.88
GABPA-203ENST00000487266 DDX60Q8IY21 1712 aaKnown RBP20.53■□□□□ 0.88
GABPA-203ENST00000487266 PPP1R42Q7Z4L9 355 aa20.52■□□□□ 0.88
GABPA-203ENST00000487266 PLBD2Q8NHP8 589 aa20.52■□□□□ 0.88
GABPA-203ENST00000487266 C7orf43Q8WVR3 580 aa20.52■□□□□ 0.88
GABPA-203ENST00000487266 HYPKQ9NX55 129 aa20.52■□□□□ 0.88
GABPA-203ENST00000487266 ATP5J2-PTCD1G3V325 749 aa20.51■□□□□ 0.87
GABPA-203ENST00000487266 TCERG1O14776 1098 aaKnown RBP20.51■□□□□ 0.87
GABPA-203ENST00000487266 HSP90AB3PQ58FF7 597 aa20.51■□□□□ 0.87
GABPA-203ENST00000487266 ANKRD13DQ6ZTN6 518 aa20.51■□□□□ 0.87
GABPA-203ENST00000487266 TAOK3Q9H2K8 898 aa20.51■□□□□ 0.87
GABPA-203ENST00000487266 FANCIQ9NVI1 1328 aa20.51■□□□□ 0.87
GABPA-203ENST00000487266 TAF1P21675 1872 aa20.5■□□□□ 0.87
GABPA-203ENST00000487266 RPGRQ92834 1020 aaKnown RBP20.5■□□□□ 0.87
GABPA-203ENST00000487266 IL16Q14005 1332 aa20.49■□□□□ 0.87
GABPA-203ENST00000487266 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
GABPA-203ENST00000487266 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
GABPA-203ENST00000487266 CCDC93Q567U6 631 aa20.48■□□□□ 0.87
GABPA-203ENST00000487266 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
GABPA-203ENST00000487266 TRMT112Q9UI30 125 aaKnown RBP20.48■□□□□ 0.87
GABPA-203ENST00000487266 LTBP3Q9NS15 1303 aa20.48■□□□□ 0.87
GABPA-203ENST00000487266 TWISTNBQ3B726 338 aaPredicted RBP20.47■□□□□ 0.87
GABPA-203ENST00000487266 SOGA3Q5TF21 947 aa20.47■□□□□ 0.87
GABPA-203ENST00000487266 ISCA1Q9BUE6 129 aa20.47■□□□□ 0.87
GABPA-203ENST00000487266 ALDH1B1P30837 517 aa20.46■□□□□ 0.87
GABPA-203ENST00000487266 HOXA10P31260 410 aaPredicted RBP20.46■□□□□ 0.87
GABPA-203ENST00000487266 GOLGA2Q08379 1002 aa20.46■□□□□ 0.87
GABPA-203ENST00000487266 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
GABPA-203ENST00000487266 CCDC30Q5VVM6 783 aa20.46■□□□□ 0.87
GABPA-203ENST00000487266 SH3TC1Q8TE82 1336 aa20.46■□□□□ 0.87
GABPA-203ENST00000487266 COL4A1P02462 1669 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 RTL5Q5HYW3 569 aaPredicted RBP20.45■□□□□ 0.86
GABPA-203ENST00000487266 SLC10A5Q5PT55 438 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 RIC3Q7Z5B4 369 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 NLRP3Q96P20 1036 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 ZNF277Q9NRM2 450 aaPredicted RBP20.45■□□□□ 0.86
GABPA-203ENST00000487266 ABCC4O15439 1325 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 RNF123Q5XPI4 1314 aa20.45■□□□□ 0.86
GABPA-203ENST00000487266 ZC3H4Q9UPT8 1303 aaKnown RBP20.45■□□□□ 0.86
GABPA-203ENST00000487266 WDR63Q8IWG1 891 aa20.44■□□□□ 0.86
GABPA-203ENST00000487266 FAM89AQ96GI7 184 aa20.44■□□□□ 0.86
GABPA-203ENST00000487266 RBM17Q96I25 401 aaKnown RBP20.44■□□□□ 0.86
GABPA-203ENST00000487266 MYD88Q99836 296 aa20.44■□□□□ 0.86
GABPA-203ENST00000487266 KDM2BQ8NHM5 1336 aa20.44■□□□□ 0.86
GABPA-203ENST00000487266 COL4A5P29400 1685 aa20.43■□□□□ 0.86
GABPA-203ENST00000487266 PPEF1O14829 653 aaPredicted RBP20.43■□□□□ 0.86
GABPA-203ENST00000487266 FKBP4Q02790 459 aaKnown RBP eCLIP20.43■□□□□ 0.86
GABPA-203ENST00000487266 G2E3Q7L622 706 aa20.43■□□□□ 0.86
GABPA-203ENST00000487266 RRAGCQ9HB90 399 aa20.43■□□□□ 0.86
GABPA-203ENST00000487266 GLTPD2A6NH11 291 aa20.42■□□□□ 0.86
GABPA-203ENST00000487266 CRAMP1Q96RY5 1269 aa20.42■□□□□ 0.86
GABPA-203ENST00000487266 EXOSC9Q06265 439 aaKnown RBP20.41■□□□□ 0.86
GABPA-203ENST00000487266 WDR90Q96KV7 1748 aa20.41■□□□□ 0.86
GABPA-203ENST00000487266 RTKN2Q8IZC4 609 aa20.4■□□□□ 0.86
GABPA-203ENST00000487266 JARID2Q92833 1246 aaPredicted RBP20.4■□□□□ 0.86
GABPA-203ENST00000487266 STK31Q9BXU1 1019 aa20.4■□□□□ 0.86
GABPA-203ENST00000487266 MAP3K2Q9Y2U5 619 aa20.4■□□□□ 0.86
GABPA-203ENST00000487266 ZNF521Q96K83 1311 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 ZNF541Q9H0D2 1346 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 CACNA1FO60840 1977 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 PI4KAP2A4QPH2 592 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 TOMM70O94826 608 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 DDX58O95786 925 aaKnown RBP20.38■□□□□ 0.85
GABPA-203ENST00000487266 PI4KAP1Q8N8J0 262 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 METTL22Q9BUU2 404 aaPredicted RBP20.38■□□□□ 0.85
GABPA-203ENST00000487266 LRRC37AA6NMS7 1700 aa20.38■□□□□ 0.85
GABPA-203ENST00000487266 IRS4O14654 1257 aaPredicted RBP20.37■□□□□ 0.85
GABPA-203ENST00000487266 VAMP4O75379 141 aa20.37■□□□□ 0.85
GABPA-203ENST00000487266 SLC4A2P04920 1241 aa20.37■□□□□ 0.85
GABPA-203ENST00000487266 IARSP41252 1262 aaKnown RBP20.37■□□□□ 0.85
GABPA-203ENST00000487266 TRIM28Q13263 835 aaKnown RBP20.37■□□□□ 0.85
GABPA-203ENST00000487266 CEP350Q5VT06 3117 aa20.37■□□□□ 0.85
GABPA-203ENST00000487266 POTECB2RU33 542 aa20.36■□□□□ 0.85
GABPA-203ENST00000487266 DDNO94850 711 aaPredicted RBP20.36■□□□□ 0.85
GABPA-203ENST00000487266 KSR2Q6VAB6 950 aa20.36■□□□□ 0.85
GABPA-203ENST00000487266 DDX46Q7L014 1031 aaKnown RBP20.36■□□□□ 0.85
GABPA-203ENST00000487266 PSMD1Q99460 953 aa20.36■□□□□ 0.85
GABPA-203ENST00000487266 ATP6V0A2Q9Y487 856 aa20.36■□□□□ 0.85
GABPA-203ENST00000487266 DUOX1Q9NRD9 1551 aa20.35■□□□□ 0.85
GABPA-203ENST00000487266 IGKV5-2P06315 115 aa20.35■□□□□ 0.85
GABPA-203ENST00000487266 GRAPQ13588 217 aa20.35■□□□□ 0.85
GABPA-203ENST00000487266 CC2D2BQ6DHV5 1058 aa20.35■□□□□ 0.85
GABPA-203ENST00000487266 C16orf71Q8IYS4 520 aaPredicted RBP20.35■□□□□ 0.85
GABPA-203ENST00000487266 ZBTB38Q8NAP3 1195 aaPredicted RBP20.35■□□□□ 0.85
GABPA-203ENST00000487266 GRAPLQ8TC17 118 aaPredicted RBP20.35■□□□□ 0.85
GABPA-203ENST00000487266 CHMP4AQ9BY43 222 aa20.35■□□□□ 0.85
GABPA-203ENST00000487266 CWC25Q9NXE8 425 aaPredicted RBP20.35■□□□□ 0.85
GABPA-203ENST00000487266 FLIIQ13045 1269 aa20.34■□□□□ 0.85
GABPA-203ENST00000487266 CWF19L2Q2TBE0 894 aaKnown RBP20.34■□□□□ 0.85
GABPA-203ENST00000487266 CCDC191Q8NCU4 936 aa20.34■□□□□ 0.85
GABPA-203ENST00000487266 CELF1Q92879 486 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms