RNA–Protein interactions for RNA: ENST00000487201.1

RHBDF1-210, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 5

Gene RHBDF1, Length 1,708 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-210ENST00000487201 NYXQ9GZU5 481 aa28.64■■■□□ 2.18
RHBDF1-210ENST00000487201 ERFEQ4G0M1 354 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 PPP1R42Q7Z4L9 355 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 DNAAF4Q8WXU2 420 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 DLEC1Q9Y238 1755 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 A0A0G2JLW4 131 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 KCNA3P22001 575 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 ST5P78524 1137 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 SYNE4Q8N205 404 aa28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 UTP14AQ9BVJ6 771 aaKnown RBP28.63■■■□□ 2.17
RHBDF1-210ENST00000487201 NPHP1O15259 732 aa28.62■■■□□ 2.17
RHBDF1-210ENST00000487201 DPEP1P16444 411 aa28.62■■■□□ 2.17
RHBDF1-210ENST00000487201 CHRNA5P30532 468 aa28.61■■■□□ 2.17
RHBDF1-210ENST00000487201 PTPRCP08575 1304 aa28.61■■■□□ 2.17
RHBDF1-210ENST00000487201 CWF19L2Q2TBE0 894 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-210ENST00000487201 BCAR3O75815 825 aa28.6■■■□□ 2.17
RHBDF1-210ENST00000487201 CCDC191Q8NCU4 936 aa28.6■■■□□ 2.17
RHBDF1-210ENST00000487201 TRMT112Q9UI30 125 aaKnown RBP28.6■■■□□ 2.17
RHBDF1-210ENST00000487201 GTF2E1P29083 439 aaPredicted RBP28.59■■■□□ 2.17
RHBDF1-210ENST00000487201 DDX60Q8IY21 1712 aaKnown RBP28.59■■■□□ 2.17
RHBDF1-210ENST00000487201 RNF123Q5XPI4 1314 aa28.58■■■□□ 2.17
RHBDF1-210ENST00000487201 RIC1Q4ADV7 1423 aa28.58■■■□□ 2.17
RHBDF1-210ENST00000487201 KLRG2A4D1S0 409 aaPredicted RBP28.58■■■□□ 2.17
RHBDF1-210ENST00000487201 NEURL1BA8MQ27 555 aa28.58■■■□□ 2.17
RHBDF1-210ENST00000487201 NEXNQ0ZGT2 675 aa28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 BEND3Q5T5X7 828 aa28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 NOB1Q9ULX3 412 aaKnown RBP28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 LAMB2P55268 1798 aa28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 PDE6BP35913 854 aa28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 FAM89AQ96GI7 184 aa28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 CWC25Q9NXE8 425 aaPredicted RBP28.57■■■□□ 2.16
RHBDF1-210ENST00000487201 SH3TC1Q8TE82 1336 aa28.56■■■□□ 2.16
RHBDF1-210ENST00000487201 SLC10A5Q5PT55 438 aa28.56■■■□□ 2.16
RHBDF1-210ENST00000487201 LINS1Q8NG48 757 aa28.56■■■□□ 2.16
RHBDF1-210ENST00000487201 WWC3Q9ULE0 1092 aa28.56■■■□□ 2.16
RHBDF1-210ENST00000487201 C3orf67Q6ZVT6 689 aa28.55■■■□□ 2.16
RHBDF1-210ENST00000487201 C2CD5Q86YS7 1000 aa28.55■■■□□ 2.16
RHBDF1-210ENST00000487201 ZBTB38Q8NAP3 1195 aaPredicted RBP28.55■■■□□ 2.16
RHBDF1-210ENST00000487201 SRGNP10124 158 aa28.54■■■□□ 2.16
RHBDF1-210ENST00000487201 RTL5Q5HYW3 569 aaPredicted RBP28.54■■■□□ 2.16
RHBDF1-210ENST00000487201 HCLS1P14317 486 aaPredicted RBP28.53■■■□□ 2.16
RHBDF1-210ENST00000487201 CRY2Q49AN0 593 aa28.53■■■□□ 2.16
RHBDF1-210ENST00000487201 KIF16BQ96L93 1317 aa28.53■■■□□ 2.16
RHBDF1-210ENST00000487201 H0YIN7 160 aa28.52■■■□□ 2.16
RHBDF1-210ENST00000487201 GCKRQ14397 625 aa28.52■■■□□ 2.16
RHBDF1-210ENST00000487201 SLC4A10Q6U841 1118 aa28.52■■■□□ 2.16
RHBDF1-210ENST00000487201 JARID2Q92833 1246 aaPredicted RBP28.52■■■□□ 2.16
RHBDF1-210ENST00000487201 PCCAP05165 728 aaPredicted RBP28.52■■■□□ 2.16
RHBDF1-210ENST00000487201 YBX3P16989 372 aaKnown RBP eCLIP28.51■■■□□ 2.15
RHBDF1-210ENST00000487201 CACNA1SQ13698 1873 aa28.5■■■□□ 2.15
RHBDF1-210ENST00000487201 PDZRN3Q9UPQ7 1066 aa28.5■■■□□ 2.15
RHBDF1-210ENST00000487201 ARHGAP45Q92619 1136 aa28.49■■■□□ 2.15
RHBDF1-210ENST00000487201 PIM2Q9P1W9 311 aa28.49■■■□□ 2.15
RHBDF1-210ENST00000487201 ARFGEF1Q9Y6D6 1849 aa28.49■■■□□ 2.15
RHBDF1-210ENST00000487201 H7C1W4 665 aa28.48■■■□□ 2.15
RHBDF1-210ENST00000487201 IRS4O14654 1257 aaPredicted RBP28.48■■■□□ 2.15
RHBDF1-210ENST00000487201 SLX4Q8IY92 1834 aa28.48■■■□□ 2.15
RHBDF1-210ENST00000487201 CASP7P55210 303 aa28.47■■■□□ 2.15
RHBDF1-210ENST00000487201 MASTLQ96GX5 879 aa28.47■■■□□ 2.15
RHBDF1-210ENST00000487201 SRCIN1Q9C0H9 1055 aa28.47■■■□□ 2.15
RHBDF1-210ENST00000487201 ALDH1L1O75891 902 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 TRIM27P14373 513 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 UBE3BQ7Z3V4 1068 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 NLRP3Q96P20 1036 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 API5Q9BZZ5 524 aaKnown RBP28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 TNNQ9UQP3 1299 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 MYH3P11055 1940 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 CDHR2Q9BYE9 1310 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 STYK1Q6J9G0 422 aa28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 FRAT1Q92837 279 aaPredicted RBP28.46■■■□□ 2.15
RHBDF1-210ENST00000487201 ZNF622Q969S3 477 aaKnown RBP eCLIP28.46■■■□□ 2.158e-9■□□□□ 9.9
RHBDF1-210ENST00000487201 TAF1P21675 1872 aa28.45■■■□□ 2.15
RHBDF1-210ENST00000487201 NPR1P16066 1061 aa28.45■■■□□ 2.14
RHBDF1-210ENST00000487201 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
RHBDF1-210ENST00000487201 GPR162Q16538 588 aa28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 DALRD3Q5D0E6 543 aaKnown RBP28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 ATF7IPQ6VMQ6 1270 aa28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 RCAN3Q9UKA8 241 aa28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 BCS1LQ9Y276 419 aa28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 ABCC4O15439 1325 aa28.44■■■□□ 2.14
RHBDF1-210ENST00000487201 HOXA10P31260 410 aaPredicted RBP28.43■■■□□ 2.14
RHBDF1-210ENST00000487201 TTLL6Q8N841 843 aa28.43■■■□□ 2.14
RHBDF1-210ENST00000487201 IPO8O15397 1037 aaKnown RBP28.42■■■□□ 2.14
RHBDF1-210ENST00000487201 COL4A1P02462 1669 aa28.41■■■□□ 2.14
RHBDF1-210ENST00000487201 GRM8O00222 908 aa28.41■■■□□ 2.14
RHBDF1-210ENST00000487201 SF3B3Q15393 1217 aaKnown RBP28.41■■■□□ 2.14
RHBDF1-210ENST00000487201 RPGRQ92834 1020 aaKnown RBP28.4■■■□□ 2.14
RHBDF1-210ENST00000487201 CNKSR1Q969H4 720 aa28.4■■■□□ 2.14
RHBDF1-210ENST00000487201 PDE8AO60658 829 aa28.4■■■□□ 2.14
RHBDF1-210ENST00000487201 ZKSCAN2Q63HK3 967 aa28.4■■■□□ 2.14
RHBDF1-210ENST00000487201 PRPF40BQ6NWY9 871 aaKnown RBP28.4■■■□□ 2.14
RHBDF1-210ENST00000487201 NBPF7P0C2Y1 421 aaPredicted RBP28.39■■■□□ 2.14
RHBDF1-210ENST00000487201 UTYO14607 1347 aa28.39■■■□□ 2.13
RHBDF1-210ENST00000487201 CLUAP1Q96AJ1 413 aa28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 USP44Q9H0E7 712 aa28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 CCT4P50991 539 aaKnown RBP28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 CRAMP1Q96RY5 1269 aa28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 PLA2G12BQ9BX93 195 aa28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 C9orf78Q9NZ63 289 aaPredicted RBP28.38■■■□□ 2.13
RHBDF1-210ENST00000487201 INTS3Q68E01 1043 aaKnown RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms